Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 1 - 30
1LocusLengthLocus description
Ortho button 1YAL001C   1160   YAL001C TFC3 SGDID:S000000001, Chr I from 151006-147594,151166-151097, Genome Release 64-1-1, reverse complement, Verified ORF, "Largest of six subunits of the RNA polymerase III transcription initiation factor complex (TFIIIC); part of the TauB domain of TFIIIC that binds DNA at the BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding"   
Ortho button 2YAL002W   1274   YAL002W VPS8 SGDID:S000000002, Chr I from 143707-147531, Genome Release 64-1-1, Verified ORF, "Membrane-associated protein that interacts with Vps21p to facilitate soluble vacuolar protein localization; component of the CORVET complex; required for localization and trafficking of the CPY sorting receptor; contains RING finger motif"   
Ortho button 3YAL003W   206   YAL003W EFB1 SGDID:S000000003, Chr I from 142174-142253,142620-143160, Genome Release 64-1-1, Verified ORF, "Translation elongation factor 1 beta; stimulates nucleotide exchange to regenerate EF-1 alpha-GTP for the next elongation cycle; part of the EF-1 complex, which facilitates binding of aminoacyl-tRNA to the ribosomal A site"   
Ortho button 4YAL005C   642   YAL005C SSA1 SGDID:S000000004, Chr I from 141431-139503, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase involved in protein folding and nuclear localization signal (NLS)-directed nuclear transport; member of heat shock protein 70 (HSP70) family; forms a chaperone complex with Ydj1p; localized to the nucleus, cytoplasm, and cell wall; 98% identical with Ssa2p, but subtle differences between the two proteins provide functional specificity with respect to propagation of yeast [URE3] prions and vacuolar-mediated degradations of gluconeogenesis enzymes"   
Ortho button 5YAL007C   215   YAL007C ERP2 SGDID:S000000005, Chr I from 138345-137698, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein that forms a heterotrimeric complex with Erp1p, Emp24p, and Erv25p; member, along with Emp24p and Erv25p, of the p24 family involved in ER to Golgi transport and localized to COPII-coated vesicles"   
Ortho button 6YAL008W   198   YAL008W FUN14 SGDID:S000000006, Chr I from 136914-137510, Genome Release 64-1-1, Verified ORF, "Mitochondrial protein of unknown function"   
Ortho button 7YAL009W   259   YAL009W SPO7 SGDID:S000000007, Chr I from 135854-136633, Genome Release 64-1-1, Verified ORF, "Putative regulatory subunit of Nem1p-Spo7p phosphatase holoenzyme, regulates nuclear growth by controlling phospholipid biosynthesis, required for normal nuclear envelope morphology, premeiotic replication, and sporulation"   
Ortho button 8YAL010C   493   YAL010C MDM10 SGDID:S000000008, Chr I from 135665-134184, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of both the ERMES complex that links the ER to mitochondria, and of the mitochondrial sorting and assembly machinery (SAM complex) that functions in import and assembly of outer membrane beta-barrel proteins"   
Ortho button 9YAL011W   625   YAL011W SWC3 SGDID:S000000009, Chr I from 132199-134076, Genome Release 64-1-1, Verified ORF, "Protein of unknown function, component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; required for formation of nuclear-associated array of smooth endoplasmic reticulum known as karmellae"   
Ortho button 10YAL012W   394   YAL012W CYS3 SGDID:S000000010, Chr I from 130799-131983, Genome Release 64-1-1, Verified ORF, "Cystathionine gamma-lyase, catalyzes one of the two reactions involved in the transsulfuration pathway that yields cysteine from homocysteine with the intermediary formation of cystathionine"   
Ortho button 11YAL013W   405   YAL013W DEP1 SGDID:S000000011, Chr I from 129270-130487, Genome Release 64-1-1, Verified ORF, "Transcriptional modulator involved in regulation of structural phospholipid biosynthesis genes and metabolically unrelated genes, as well as maintenance of telomeres, mating efficiency, and sporulation"   
Ortho button 12YAL014C   255   YAL014C SYN8 SGDID:S000000012, Chr I from 129019-128252, Genome Release 64-1-1, reverse complement, Verified ORF, "Endosomal SNARE related to mammalian syntaxin 8"   
Ortho button 13YAL015C   399   YAL015C NTG1 SGDID:S000000013, Chr I from 128102-126903, Genome Release 64-1-1, reverse complement, Verified ORF, "DNA N-glycosylase and apurinic/apyrimidinic (AP) lyase involved in base excision repair; acts in both nucleus and mitochondrion; creates a double-strand break at mtDNA origins that stimulates replication in response to oxidative stress"   
Ortho button 14YAL016W   635   YAL016W TPD3 SGDID:S000000014, Chr I from 124879-126786, Genome Release 64-1-1, Verified ORF, "Regulatory subunit A of the heterotrimeric protein phosphatase 2A (PP2A), which also contains regulatory subunit Cdc55p and either catalytic subunit Pph21p or Pph22p; required for cell morphogenesis and transcription by RNA polymerase III"   
Ortho button 15YAL017W   1356   YAL017W PSK1 SGDID:S000000015, Chr I from 120225-124295, Genome Release 64-1-1, Verified ORF, "One of two (see also PSK2) PAS domain containing S/T protein kinases; coordinately regulates protein synthesis and carbohydrate metabolism and storage in response to a unknown metabolite that reflects nutritional status"   
Ortho button 16YAL018C   325   YAL018C YAL018C SGDID:S000000016, Chr I from 119541-118564, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 17YAL019W   1131   YAL019W FUN30 SGDID:S000000017, Chr I from 114919-118314, Genome Release 64-1-1, Verified ORF, "Conserved member of the Snf2p family with ATP-dependent chromatin remodeling activity; has a role in silencing; potential Cdc28p substrate; authentic, non-tagged protein is detected in purified mitochondria in high-throughput studies"   
Ortho button 18YAL020C   333   YAL020C ATS1 SGDID:S000000018, Chr I from 114615-113614, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein required, with Elongator complex, Kti11p, and Kti12p, for modification of wobble nucleosides in tRNA; has a potential role in regulatory interactions between microtubules and the cell cycle"   
Ortho button 19YAL021C   837   YAL021C CCR4 SGDID:S000000019, Chr I from 113359-110846, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the CCR4-NOT transcriptional complex, which is involved in regulation of gene expression; component of the major cytoplasmic deadenylase, which is involved in mRNA poly(A) tail shortening"   
Ortho button 20YAL022C   517   YAL022C FUN26 SGDID:S000000020, Chr I from 110430-108877, Genome Release 64-1-1, reverse complement, Verified ORF, "Vacuolar membrane transporter with broad nucleoside selectivity; may regulate balance of nicotinamide riboside (NmR) levels between cytosol and vacuole, contributing to salvage of NmR for use in cytosolic NAD+ synthesis"   
Ortho button 21YAL023C   759   YAL023C PMT2 SGDID:S000000021, Chr I from 108551-106272, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein O-mannosyltransferase, transfers mannose residues from dolichyl phosphate-D-mannose to protein Ser/Thr residues; involved in ER quality control; acts in a complex with Pmt1p, can instead interact with Pmt5; target for new antifungal"   
Ortho button 22YAL024C   1435   YAL024C LTE1 SGDID:S000000022, Chr I from 105872-101565, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein similar to GDP/GTP exchange factors but without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures"   
Ortho button 23YAL025C   306   YAL025C MAK16 SGDID:S000000023, Chr I from 101145-100225, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nuclear protein, constituent of 66S pre-ribosomal particles; required for maturation of 25S and 5.8S rRNAs; required for maintenance of M1 satellite double-stranded RNA of the L-A virus"   
Ortho button 24YAL026C   1355   YAL026C DRS2 SGDID:S000000024, Chr I from 99697-95630, Genome Release 64-1-1, reverse complement, Verified ORF, "Aminophospholipid translocase (flippase) that maintains membrane lipid asymmetry in post-Golgi secretory vesicles; contributes to clathrin-coated vesicle formation and endocytosis; mutations in human homolog ATP8B1 result in liver disease"   
Ortho button 25YAL027W   261   YAL027W SAW1 SGDID:S000000025, Chr I from 94687-95472, Genome Release 64-1-1, Verified ORF, "Protein involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during double-strand break repair via single-strand annealing; green fluorescent protein (GFP)-fusion protein localizes to the nucleus"   
Ortho button 26YAL028W   528   YAL028W FRT2 SGDID:S000000026, Chr I from 92900-94486, Genome Release 64-1-1, Verified ORF, "Tail-anchored ER membrane protein, interacts with homolog Frt1p; promotes growth in conditions of high Na+, alkaline pH, or cell wall stress, possibly via a role in posttranslational translocation; potential Cdc28p substrate"   
Ortho button 27YAL029C   1471   YAL029C MYO4 SGDID:S000000027, Chr I from 92270-87855, Genome Release 64-1-1, reverse complement, Verified ORF, "One of two type V myosin motors (along with MYO2) involved in actin-based transport of cargos; required for mRNA transport, including ASH1 mRNA, and facilitating the growth and movement of ER tubules into the growing bud along with She3p"   
Ortho button 28YAL030W   117   YAL030W SNC1 SGDID:S000000028, Chr I from 87286-87387,87501-87752, Genome Release 64-1-1, Verified ORF, "Vesicle membrane receptor protein (v-SNARE) involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins"   
Ortho button 29YAL031C   760   YAL031C GIP4 SGDID:S000000029, Chr I from 87031-84749, Genome Release 64-1-1, reverse complement, Verified ORF, "Cytoplasmic Glc7-interacting protein whose overexpression relocalizes Glc7p from the nucleus and prevents chromosome segregation; potential Cdc28p substrate"   
Ortho button 30YAL032C   379   YAL032C PRP45 SGDID:S000000030, Chr I from 84474-83335, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein required for pre-mRNA splicing; associates with the spliceosome and interacts with splicing factors Prp22p and Prp46p; orthologous to human transcriptional coactivator SKIP and can activate transcription of a reporter gene"   
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