At gpcr

Arabidopsis thaliana 7TMR Mining

Moriyama, E. N., Strope, P. K., Opiyo, S. O., Chen, Z. and Jones, A. M. (2006)
"Mining the Arabidopsis thaliana genome for highly-divergent seven transmembrane receptors." Genome Biology 7: R96.

— Lists of 7-transmembrane putative receptor (7TMpR) candidiates —
— Tools —
   Hierarchical Mining Web-server — do your own hierarchical mining

— Methods used —
Arabidopsis thaliana protein data used —
— Training datasets used —
— Related links —
— Other related publications —

Johnston, C. A., Temple, B. R., Chen, J.-G., Gao, Y., Moriyama, E. N., Jones, A. M., Siderovski, D. P. and Willard, F. S. (2007)
Comment on "A G protein-coupled receptor is a plasma membrane receptor for the plant hormone abscisic acid". Science 318: 914.

Opiyo, S. O. and Moriyama, E. N. (2007)
"Protein family classification with partial least squares." J Proteome Res 6: 846-853.

Strope, P. K. and Moriyama, E. N. (2007)
"Simple alignment-free methods for protein classification: a case study from G-protein coupled receptors." Genomics 89: 602-612.

The Arabidopsis image was reproduced with permission from: The Arabidopsis Information Resource (TAIR),, Sep 11, 2006. [Last updated: 12/25/2007]