Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 961 - 990
1LocusLengthLocus description
Ortho button 961YDR072C   527   YDR072C IPT1 SGDID:S000002479, Chr IV from 591344-589761, Genome Release 64-1-1, reverse complement, Verified ORF, "Inositolphosphotransferase, involved in synthesis of mannose-(inositol-P)2-ceramide (M(IP)2C), the most abundant sphingolipid;, can mutate to resistance to the antifungals syringomycin E and DmAMP1 and to K. lactis zymocin"   
Ortho button 962YDR073W   169   YDR073W SNF11 SGDID:S000002480, Chr IV from 592439-592948, Genome Release 64-1-1, Verified ORF, "Subunit of the SWI/SNF chromatin remodeling complex involved in transcriptional regulation; interacts with a highly conserved 40-residue sequence of Snf2p"   
Ortho button 963YDR074W   896   YDR074W TPS2 SGDID:S000002481, Chr IV from 593893-596583, Genome Release 64-1-1, Verified ORF, "Phosphatase subunit of the trehalose-6-phosphate synthase/phosphatase complex, which synthesizes the storage carbohydrate trehalose; expression is induced by stress conditions and repressed by the Ras-cAMP pathway"   
Ortho button 964YDR075W   308   YDR075W PPH3 SGDID:S000002482, Chr IV from 597156-598082, Genome Release 64-1-1, Verified ORF, "Catalytic subunit of protein phosphatase PP4 complex; active complex is composed of Pph3p and Psy2p, with Psy4p apparently providing additional substrate specificity in some cases; regulates recovery from the DNA damage checkpoint and also the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair; involved in activation of Gln3p to alleviate nitrogen catabolite repression; Pph3p and Psy2p localize to foci on meiotic chromosomes"   
Ortho button 965YDR076W   406   YDR076W RAD55 SGDID:S000002483, Chr IV from 598468-599688, Genome Release 64-1-1, Verified ORF, "Protein that stimulates strand exchange by stabilizing the binding of Rad51p to single-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; forms heterodimer with Rad57p"   
Ortho button 966YDR077W   338   YDR077W SED1 SGDID:S000002484, Chr IV from 600793-601809, Genome Release 64-1-1, Verified ORF, "Major stress-induced structural GPI-cell wall glycoprotein in stationary-phase cells, associates with translating ribosomes, possible role in mitochondrial genome maintenance; ORF contains two distinct variable minisatellites"   
Ortho button 967YDR078C   223   YDR078C SHU2 SGDID:S000002485, Chr IV from 602869-602198, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in a Rad51p-, Rad54p-dependent pathway for homologous recombination repair, important for error-free repair of spontaneous and induced DNA lesions to protect the genome from mutation; associates with Shu1p, Psy3p, and Csm2p"   
Ortho button 968YDR079C-A   72   YDR079C-A TFB5 SGDID:S000007603, Chr IV from 603811-603593, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the RNA polymerase II general transcription and DNA repair factor TFIIH; involved in transcription initiation and in nucleotide-excision repair; homolog of Chlamydomonas reinhardtii REX1-S protein involved in DNA repair"   
Ortho button 969YDR079W   111   YDR079W PET100 SGDID:S000002486, Chr IV from 603064-603399, Genome Release 64-1-1, Verified ORF, "Chaperone that specifically facilitates the assembly of cytochrome c oxidase, integral to the mitochondrial inner membrane; interacts with a subcomplex of subunits VII, VIIa, and VIII (Cox7p, Cox9p, and Cox8p) but not with the holoenzyme"   
Ortho button 970YDR080W   992   YDR080W VPS41 SGDID:S000002487, Chr IV from 604008-606986, Genome Release 64-1-1, Verified ORF, "Vacuolar membrane protein that is a subunit of the homotypic vacuole fusion and vacuole protein sorting (HOPS) complex; essential for membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of protein transport"   
Ortho button 971YDR081C   925   YDR081C PDC2 SGDID:S000002488, Chr IV from 610081-607304, Genome Release 64-1-1, reverse complement, Verified ORF, "Transcription factor required for the synthesis of the glycolytic enzyme pyruvate decarboxylase, required for high level expression of both the THI and the PDC genes"   
Ortho button 972YDR082W   494   YDR082W STN1 SGDID:S000002489, Chr IV from 610441-611925, Genome Release 64-1-1, Verified ORF, "Telomere end-binding and capping protein, plays a key role with Pol12p in linking telomerase action with completion of lagging strand synthesis, and in a regulatory step required for telomere capping"   
Ortho button 973YDR083W   392   YDR083W RRP8 SGDID:S000002490, Chr IV from 612073-613251, Genome Release 64-1-1, Verified ORF, "Nucleolar protein involved in rRNA processing, pre-rRNA cleavage at site A2; also involved in telomere maintenance; mutation is synthetically lethal with a gar1 mutation"   
Ortho button 974YDR084C   199   YDR084C TVP23 SGDID:S000002491, Chr IV from 614004-613405, Genome Release 64-1-1, reverse complement, Verified ORF, "Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern"   
Ortho button 975YDR085C   620   YDR085C AFR1 SGDID:S000002492, Chr IV from 616150-614288, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein required for pheromone-induced projection (shmoo) formation; regulates septin architecture during mating; has an RVXF motif that mediates targeting of Glc7p to mating projections; interacts with Cdc12p"   
Ortho button 976YDR086C   80   YDR086C SSS1 SGDID:S000002493, Chr IV from 617170-616928, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p) that forms a channel for passage of secretory proteins through the endoplasmic reticulum membrane, and of the Ssh1p complex (Ssh1p-Sbh2p-Sss1p); interacts with Ost4p and Wbp1p"   
Ortho button 977YDR087C   278   YDR087C RRP1 SGDID:S000002494, Chr IV from 618306-617470, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential evolutionarily conserved nucleolar protein necessary for biogenesis of 60S ribosomal subunits and processing of pre-rRNAs to mature rRNAs, associated with several distinct 66S pre-ribosomal particles"   
Ortho button 978YDR088C   382   YDR088C SLU7 SGDID:S000002495, Chr IV from 619645-618497, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA splicing factor, required for ATP-independent portion of 2nd catalytic step of spliceosomal RNA splicing; interacts with Prp18p; contains zinc knuckle domain"   
Ortho button 979YDR089W   869   YDR089W YDR089W SGDID:S000002496, Chr IV from 622112-624721, Genome Release 64-1-1, Uncharacterized ORF, "Protein of unknown function; deletion confers resistance to Nickel"   
Ortho button 980YDR090C   310   YDR090C YDR090C SGDID:S000002497, Chr IV from 625998-625066, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 981YDR091C   608   YDR091C RLI1 SGDID:S000002498, Chr IV from 628534-626708, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential iron-sulfur protein required for ribosome biogenesis and translation initiation and termination; facilitates binding of a multifactor complex (MFC) of initiation factors to the small ribosomal subunit; predicted ABC family ATPase"   
Ortho button 982YDR092W   153   YDR092W UBC13 SGDID:S000002499, Chr IV from 629876-629905,630174-630605, Genome Release 64-1-1, Verified ORF, "Ubiquitin-conjugating enzyme involved in the error-free DNA postreplication repair pathway; interacts with Mms2p to assemble ubiquitin chains at the Ub Lys-63 residue; DNA damage triggers redistribution from the cytoplasm to the nucleus"   
Ortho button 983YDR093W   1612   YDR093W DNF2 SGDID:S000002500, Chr IV from 631282-636120, Genome Release 64-1-1, Verified ORF, "Aminophospholipid translocase (flippase) that localizes primarily to the plasma membrane; contributes to endocytosis, protein transport and cell polarity; type 4 P-type ATPase"   
Ortho button 984YDR096W   894   YDR096W GIS1 SGDID:S000002503, Chr IV from 637139-639823, Genome Release 64-1-1, Verified ORF, "JmjC domain-containing histone demethylase and transcription factor; involved in expression of genes during nutrient limitation; negatively regulates DPP1 and PHR1; activity is modulated by limited proteasome-mediated proteolysis; has a JmjC and a JmjN domain in the N-terminal region that interact, promoting Gis1p stability and proper transcriptional activity; contains transactivating domains TAD1 and TAD2 downstream of the Jmj domains and a C-terminal DNA binding domain"   
Ortho button 985YDR097C   1242   YDR097C MSH6 SGDID:S000002504, Chr IV from 643837-640109, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein required for mismatch repair in mitosis and meiosis, forms a complex with Msh2p to repair both single-base & insertion-deletion mispairs; potentially phosphorylated by Cdc28p"   
Ortho button 986YDR098C   285   YDR098C GRX3 SGDID:S000002505, Chr IV from 645035-644178, Genome Release 64-1-1, reverse complement, Verified ORF, "Hydroperoxide and superoxide-radical responsive glutathione-dependent oxidoreductase; monothiol glutaredoxin subfamily member along with Grx4p and Grx5p; protects cells from oxidative damage"   
Ortho button 987YDR098C-A   440   YDR098C-A YDR098C-A SGDID:S000007390, Chr IV from 651126-649804, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
Ortho button 988YDR098C-B   1755   YDR098C-B YDR098C-B SGDID:S000007391, Chr IV from 649820-645858,651126-649822, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
Ortho button 989YDR099W   273   YDR099W BMH2 SGDID:S000002506, Chr IV from 653607-654428, Genome Release 64-1-1, Verified ORF, "14-3-3 protein, minor isoform; controls proteome at post-transcriptional level, binds proteins and DNA, involved in regulation of many processes including exocytosis, vesicle transport, Ras/MAPK signaling, and rapamycin-sensitive signaling"   
Ortho button 990YDR100W   143   YDR100W TVP15 SGDID:S000002507, Chr IV from 655013-655444, Genome Release 64-1-1, Verified ORF, "Integral membrane protein localized to late Golgi vesicles along with the v-SNARE Tlg2p"   
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