Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 5401 - 5430
1LocusLengthLocus description
Ortho button 5401YPL001W   374   YPL001W HAT1 SGDID:S000005922, Chr XVI from 554605-555729, Genome Release 64-1-1, Verified ORF, "Catalytic subunit of the Hat1p-Hat2p histone acetyltransferase complex that uses the cofactor acetyl coenzyme A, to acetylate free nuclear and cytoplasmic histone H4; involved in telomeric silencing and DNA double-strand break repair"   
Ortho button 5402YPL002C   233   YPL002C SNF8 SGDID:S000005923, Chr XVI from 554328-553627, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the ESCRT-II complex, which is involved in ubiquitin-dependent sorting of proteins into the endosome; appears to be functionally related to SNF7; involved in glucose derepression"   
Ortho button 5403YPL003W   462   YPL003W ULA1 SGDID:S000005924, Chr XVI from 552020-553408, Genome Release 64-1-1, Verified ORF, "Protein that acts together with Uba3p to activate Rub1p before its conjugation to proteins (neddylation), which may play a role in protein degradation"   
Ortho button 5404YPL004C   341   YPL004C LSP1 SGDID:S000005925, Chr XVI from 551657-550632, Genome Release 64-1-1, reverse complement, Verified ORF, "Primary component of eisosomes, which are large immobile patch structures at the cell cortex associated with endocytosis, along with Pil1p and Sur7p; null mutants show activation of Pkc1p/Ypk1p stress resistance pathways; member of the BAR domain family"   
Ortho button 5405YPL005W   606   YPL005W AEP3 SGDID:S000005926, Chr XVI from 548486-550306, Genome Release 64-1-1, Verified ORF, "Protein that may facilitate use of unformylated tRNA-Met in mitochondrial translation initiation; localized to the matrix face of the mitochondrial inner membrane; stabilizes the bicistronic AAP1-ATP6 mRNA"   
Ortho button 5406YPL006W   1170   YPL006W NCR1 SGDID:S000005927, Chr XVI from 544631-548143, Genome Release 64-1-1, Verified ORF, "Vacuolar membrane protein that transits through the biosynthetic vacuolar protein sorting pathway, involved in sphingolipid metabolism; glycoprotein and functional orthologue of human Niemann Pick C1 (NPC1) protein"   
Ortho button 5407YPL007C   588   YPL007C TFC8 SGDID:S000005928, Chr XVI from 543848-542082, Genome Release 64-1-1, reverse complement, Verified ORF, "One of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); part of TFIIIC TauB domain that binds BoxB promoter sites of tRNA and other genes; linker between TauB and TauA domains; human homolog is TFIIIC-90"   
Ortho button 5408YPL008W   861   YPL008W CHL1 SGDID:S000005929, Chr XVI from 539385-541970, Genome Release 64-1-1, Verified ORF, "Probable DNA helicase involved in sister-chromatid cohesion and genome integrity; interacts with ECO1 and CTF18; mutants are defective in silencing, rDNA recombination, aging and the heat shock response; FANCJ-like helicase family member"   
Ortho button 5409YPL009C   1038   YPL009C TAE2 SGDID:S000005930, Chr XVI from 538936-535820, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function, involved in protein translation; may interact with ribosomes, based on co-purification experiments; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm"   
Ortho button 5410YPL010W   189   YPL010W RET3 SGDID:S000005931, Chr XVI from 535018-535587, Genome Release 64-1-1, Verified ORF, "Zeta subunit of the coatomer complex (COPI), which coats Golgi-derived transport vesicles; involved in retrograde transport between Golgi and ER"   
Ortho button 5411YPL011C   353   YPL011C TAF3 SGDID:S000005932, Chr XVI from 534703-533642, Genome Release 64-1-1, reverse complement, Verified ORF, "TFIID subunit (47 kDa), involved in promoter binding and RNA polymerase II transcription initiation"   
Ortho button 5412YPL012W   1228   YPL012W RRP12 SGDID:S000005933, Chr XVI from 529723-533409, Genome Release 64-1-1, Verified ORF, "Protein required for export of the ribosomal subunits; associates with the RNA components of the pre-ribosomes; has a role in nuclear import in association with Pse1p; contains HEAT-repeats"   
Ortho button 5413YPL013C   121   YPL013C MRPS16 SGDID:S000005934, Chr XVI from 529350-528985, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial ribosomal protein of the small subunit"   
Ortho button 5414YPL014W   381   YPL014W YPL014W SGDID:S000005935, Chr XVI from 527547-528692, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and to the nucleus"   
Ortho button 5415YPL015C   357   YPL015C HST2 SGDID:S000005936, Chr XVI from 526883-525810, Genome Release 64-1-1, reverse complement, Verified ORF, "Cytoplasmic member of the silencing information regulator 2 (Sir2) family of NAD(+)-dependent protein deacetylases; modulates nucleolar (rDNA) and telomeric silencing; possesses NAD(+)-dependent histone deacetylase activity in vitro"   
Ortho button 5416YPL016W   1314   YPL016W SWI1 SGDID:S000005937, Chr XVI from 521014-524958, Genome Release 64-1-1, Verified ORF, "Subunit of the SWI/SNF chromatin remodeling complex, which regulates transcription by remodeling chromosomes; required for transcription of many genes, including ADH1, ADH2, GAL1, HO, INO1 and SUC2; can form the prion [SWI+]"   
Ortho button 5417YPL017C   499   YPL017C IRC15 SGDID:S000005938, Chr XVI from 520233-518734, Genome Release 64-1-1, reverse complement, Verified ORF, "Microtubule associated protein; regulates microtubule dynamics; required for accurate meiotic chromosome segregation; null mutant displays large budded cells due to delayed mitotic progression, increased levels of spontaneous Rad52 foci"   
Ortho button 5418YPL018W   369   YPL018W CTF19 SGDID:S000005939, Chr XVI from 517651-518760, Genome Release 64-1-1, Verified ORF, "Outer kinetochore protein, required for accurate mitotic chromosome segregation; component of the kinetochore sub-complex COMA (Ctf19p, Okp1p, Mcm21p, Ame1p) that functions as a platform for kinetochore assembly"   
Ortho button 5419YPL019C   835   YPL019C VTC3 SGDID:S000005940, Chr XVI from 517018-514511, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the vacuolar transporter chaperone (VTC) complex involved in membrane trafficking, vacuolar polyphosphate accumulation, microautophagy and non-autophagic vacuolar fusion"   
Ortho button 5420YPL020C   621   YPL020C ULP1 SGDID:S000005941, Chr XVI from 514178-512313, Genome Release 64-1-1, reverse complement, Verified ORF, "Protease that specifically cleaves Smt3p protein conjugates; required for cell cycle progression; associates with nucleoporins and may interact with septin rings during telophase; sequestered to the nucleolus under stress conditions"   
Ortho button 5421YPL021W   187   YPL021W ECM23 SGDID:S000005942, Chr XVI from 511101-511664, Genome Release 64-1-1, Verified ORF, "Non-essential protein of unconfirmed function; affects pre-rRNA processing, may act as a negative regulator of the transcription of genes involved in pseudohyphal growth; homologous to Srd1p"   
Ortho button 5422YPL022W   1100   YPL022W RAD1 SGDID:S000005943, Chr XVI from 506697-509999, Genome Release 64-1-1, Verified ORF, "Single-stranded DNA endonuclease (with Rad10p), cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human XPF protein"   
Ortho button 5423YPL023C   657   YPL023C MET12 SGDID:S000005944, Chr XVI from 506312-504339, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein with methylenetetrahydrofolate reductase (MTHFR) activity in vitro; null mutant has no phenotype and is prototrophic for methionine; MET13 encodes major isozyme of MTHFR"   
Ortho button 5424YPL024W   241   YPL024W RMI1 SGDID:S000005945, Chr XVI from 503517-504242, Genome Release 64-1-1, Verified ORF, "Subunit of the RecQ (Sgs1p) - Topo III (Top3p) complex; stimulates superhelical relaxing and ssDNA binding activities of Top3p; involved in response to DNA damage; null mutants display increased rates of recombination and delayed S phase"   
Ortho button 5425YPL026C   502   YPL026C SKS1 SGDID:S000005947, Chr XVI from 502183-500675, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative serine/threonine protein kinase; involved in the adaptation to low concentrations of glucose independent of the SNF3 regulated pathway"   
Ortho button 5426YPL027W   245   YPL027W SMA1 SGDID:S000005948, Chr XVI from 499665-500402, Genome Release 64-1-1, Verified ORF, "Protein of unknown function involved in the assembly of the prospore membrane during sporulation; interacts with Spo14p"   
Ortho button 5427YPL028W   398   YPL028W ERG10 SGDID:S000005949, Chr XVI from 498096-499292, Genome Release 64-1-1, Verified ORF, "Acetyl-CoA C-acetyltransferase (acetoacetyl-CoA thiolase), cytosolic enzyme that transfers an acetyl group from one acetyl-CoA molecule to another, forming acetoacetyl-CoA; involved in the first step in mevalonate biosynthesis"   
Ortho button 5428YPL029W   737   YPL029W SUV3 SGDID:S000005950, Chr XVI from 495506-497719, Genome Release 64-1-1, Verified ORF, "ATP-dependent RNA helicase, component of the mitochondrial degradosome along with the RNase Dss1p; the degradosome associates with the ribosome and mediates RNA turnover; also required during splicing of the COX1 AI5_beta intron"   
Ortho button 5429YPL030W   567   YPL030W TRM44 SGDID:S000005951, Chr XVI from 493543-495246, Genome Release 64-1-1, Verified ORF, "tRNA(Ser) Um(44) 2'-O-methyltransferase; involved in maintaining levels of the tRNA-Ser species tS(CGA) and tS(UGA); conserved among metazoans and fungi but there does not appear to be a homolog in plants; TRM44 is a non-essential gene"   
Ortho button 5430YPL031C   305   YPL031C PHO85 SGDID:S000005952, Chr XVI from 492918-492018,493037-493021, Genome Release 64-1-1, reverse complement, Verified ORF, "Cyclin-dependent kinase, with ten cyclin partners; involved in regulating the cellular response to nutrient levels and environmental conditions and progression through the cell cycle"   
Eliminate entries with:
Find entries with:
Locus ID:
Description:
Minimum length: