Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 5161 - 5190
1LocusLengthLocus description
Ortho button 5161YOR142W-A   440   YOR142W-A YOR142W-A SGDID:S000007351, Chr XV from 595112-596434, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
Ortho button 5162YOR142W-B   1755   YOR142W-B YOR142W-B SGDID:S000007352, Chr XV from 595112-596416,596418-600380, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
Ortho button 5163YOR143C   319   YOR143C THI80 SGDID:S000005669, Chr XV from 602342-601383, Genome Release 64-1-1, reverse complement, Verified ORF, "Thiamine pyrophosphokinase, phosphorylates thiamine to produce the coenzyme thiamine pyrophosphate (thiamine diphosphate)"   
Ortho button 5164YOR144C   791   YOR144C ELG1 SGDID:S000005670, Chr XV from 605092-602717, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of an alternative replication factor C complex important for DNA replication and genome integrity; suppresses spontaneous DNA damage; involved in homologous recombination-mediated repair and telomere homeostasis"   
Ortho button 5165YOR145C   274   YOR145C PNO1 SGDID:S000005671, Chr XV from 606171-605347, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential nucleolar protein required for pre-18S rRNA processing, interacts with Dim1p, an 18S rRNA dimethyltransferase, and also with Nob1p, which is involved in proteasome biogenesis; contains a KH domain"   
Ortho button 5166YOR147W   622   YOR147W MDM32 SGDID:S000005673, Chr XV from 606607-608475, Genome Release 64-1-1, Verified ORF, "Mitochondrial inner membrane protein with similarity to Mdm31p, required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MDM10, MDM12, and MDM34"   
Ortho button 5167YOR148C   185   YOR148C SPP2 SGDID:S000005674, Chr XV from 609197-608640, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential protein that promotes the first step of splicing and is required for the final stages of spliceosome maturation; interacts with Prp2p, which may release Spp2p from the spliceosome following the first cleavage reaction"   
Ortho button 5168YOR149C   516   YOR149C SMP3 SGDID:S000005675, Chr XV from 611388-609838, Genome Release 64-1-1, reverse complement, Verified ORF, "Alpha 1,2-mannosyltransferase involved in glycosyl phosphatidyl inositol (GPI) biosynthesis; required for addition of the fourth, side branching mannose to the GPI core structure"   
Ortho button 5169YOR150W   163   YOR150W MRPL23 SGDID:S000005676, Chr XV from 611999-612490, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the large subunit"   
Ortho button 5170YOR151C   1224   YOR151C RPB2 SGDID:S000005677, Chr XV from 616671-612997, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA polymerase II second largest subunit B150, part of central core; similar to bacterial beta subunit"   
Ortho button 5171YOR152C   256   YOR152C YOR152C SGDID:S000005678, Chr XV from 618288-617518, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; YOR152C is not an essential gene"   
Ortho button 5172YOR153W   1511   YOR153W PDR5 SGDID:S000005679, Chr XV from 619840-624375, Genome Release 64-1-1, Verified ORF, "Plasma membrane ATP-binding cassette (ABC) transporter, multidrug transporter actively regulated by Pdr1p; also involved in steroid transport, cation resistance, and cellular detoxification during exponential growth"   
Ortho button 5173YOR154W   587   YOR154W SLP1 SGDID:S000005680, Chr XV from 624729-626492, Genome Release 64-1-1, Uncharacterized ORF, "Integral membrane protein of unknown function; member of the SUN-like family of proteins; genetic interactions suggest a role in folding of ER membrane proteins"   
Ortho button 5174YOR155C   450   YOR155C ISN1 SGDID:S000005681, Chr XV from 627980-626628, Genome Release 64-1-1, reverse complement, Verified ORF, "Inosine 5'-monophosphate (IMP)-specific 5'-nucleotidase, catalyzes the breakdown of IMP to inosine, does not show similarity to known 5'-nucleotidases from other organisms"   
Ortho button 5175YOR156C   726   YOR156C NFI1 SGDID:S000005682, Chr XV from 630540-628360, Genome Release 64-1-1, reverse complement, Verified ORF, "SUMO E3 ligase, catalyzes the covalent attachment of SUMO (Smt3p) to proteins; primary E3 ligase for Sir4p; sumoylates Yku70p/Yku80p and Sir4p in vivo to promote chromatin anchoring; promotes telomere anchoring to the nuclear envelope; involved in maintenance of proper telomere length"   
Ortho button 5176YOR157C   261   YOR157C PUP1 SGDID:S000005683, Chr XV from 631751-630966, Genome Release 64-1-1, reverse complement, Verified ORF, "Beta 2 subunit of the 20S proteasome; endopeptidase with trypsin-like activity that cleaves after basic residues; synthesized as a proprotein before being proteolytically processed for assembly into 20S particle; human homolog is subunit Z"   
Ortho button 5177YOR158W   318   YOR158W PET123 SGDID:S000005684, Chr XV from 632164-633120, Genome Release 64-1-1, Verified ORF, "Mitochondrial ribosomal protein of the small subunit; PET123 exhibits genetic interactions with PET122, which encodes a COX3 mRNA-specific translational activator"   
Ortho button 5178YOR159C   94   YOR159C SME1 SGDID:S000005685, Chr XV from 633566-633282, Genome Release 64-1-1, reverse complement, Verified ORF, "Core Sm protein Sm E; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Smd3p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm E"   
Ortho button 5179YOR160W   972   YOR160W MTR10 SGDID:S000005686, Chr XV from 633839-636757, Genome Release 64-1-1, Verified ORF, "Nuclear import receptor, mediates the nuclear localization of proteins involved in mRNA-nucleus export; promotes dissociation of mRNAs from the nucleus-cytoplasm mRNA shuttling protein Npl3p; required for retrograde import of mature tRNAs"   
Ortho button 5180YOR161C   539   YOR161C PNS1 SGDID:S000005687, Chr XV from 638558-636939, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function; has similarity to Torpedo californica tCTL1p, which is postulated to be a choline transporter, neither null mutation nor overexpression affects choline transport"   
Ortho button 5181YOR161C-C   48   YOR161C-C YOR161C-C SGDID:S000028712, Chr XV from 639267-639121, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching"   
Ortho button 5182YOR162C   810   YOR162C YRR1 SGDID:S000005688, Chr XV from 641992-639560, Genome Release 64-1-1, reverse complement, Verified ORF, "Zn2-Cys6 zinc-finger transcription factor that activates genes involved in multidrug resistance; paralog of Yrm1p, acting on an overlapping set of target genes"   
Ortho button 5183YOR163W   188   YOR163W DDP1 SGDID:S000005689, Chr XV from 642741-643307, Genome Release 64-1-1, Verified ORF, "Polyphosphate phosphatase; hydrolyzes diphosphorylated inositol polyphosphates and diadenosine polyphosphates; has high specificity for diadenosine hexa- and pentaphosphates; exhibits endopolyphosphatase activity with a high affinity for polyphosphates, an activity also observed for its human DIPP homologs; member of the MutT family of nucleotide hydrolases"   
Ortho button 5184YOR164C   312   YOR164C GET4 SGDID:S000005690, Chr XV from 644332-643394, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein with a role in insertion of tail-anchored proteins into the ER membrane; forms a complex with Mdy2p; highly conserved across species and homologous to human gene C7orf20"   
Ortho button 5185YOR165W   776   YOR165W SEY1 SGDID:S000005691, Chr XV from 644566-646896, Genome Release 64-1-1, Verified ORF, "GTPase with a role in ER morphology; interacts physically and genetically with Yop1p and Rtn1p; possible functional ortholog of mammalian atlastins, defects in which cause a form of hereditary spastic paraplegia; homolog of Arabidopsis RHD3"   
Ortho button 5186YOR166C   458   YOR166C SWT1 SGDID:S000005692, Chr XV from 648502-647126, Genome Release 64-1-1, reverse complement, Verified ORF, "RNA endoribonuclease involved in perinuclear mRNP quality control via the turnover of aberrant, unprocessed pre-mRNAs; interacts with subunits of THO/TREX, TREX-2, and RNA polymerase II; contains a PIN (PilT N terminus) domain"   
Ortho button 5187YOR167C   67   YOR167C RPS28A SGDID:S000005693, Chr XV from 649007-648804, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps28Bp and has similarity to rat S28 ribosomal protein"   
Ortho button 5188YOR168W   809   YOR168W GLN4 SGDID:S000005694, Chr XV from 649303-651732, Genome Release 64-1-1, Verified ORF, "Glutamine tRNA synthetase, monomeric class I tRNA synthetase that catalyzes the specific glutaminylation of tRNA(Glu); N-terminal domain proposed to be involved in enzyme-tRNA interactions"   
Ortho button 5189YOR171C   624   YOR171C LCB4 SGDID:S000005697, Chr XV from 653884-652010, Genome Release 64-1-1, reverse complement, Verified ORF, "Sphingoid long-chain base kinase, responsible for synthesis of long-chain base phosphates, which function as signaling molecules, regulates synthesis of ceramide from exogenous long-chain bases, localizes to the Golgi and late endosomes"   
Ortho button 5190YOR172W   786   YOR172W YRM1 SGDID:S000005698, Chr XV from 654210-656570, Genome Release 64-1-1, Verified ORF, "Zn2-Cys6 zinc-finger transcription factor that activates genes involved in multidrug resistance; paralog of Yrr1p, acting on an overlapping set of target genes"   
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