Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 4021 - 4050
1LocusLengthLocus description
Ortho button 4021YML010W   1063   YML010W SPT5 SGDID:S000004470, Chr XIII from 247677-250868, Genome Release 64-1-1, Verified ORF, "Protein involved in regulating Pol I and Pol II transcription and pre-mRNA processing; forms a complex with Spt4p; contains a C-terminal repeat domain that is a target for phosphorylation by Sgv1p"   
Ortho button 4022YML011C   177   YML011C RAD33 SGDID:S000004472, Chr XIII from 247428-246895, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in nucleotide excision repair; green fluorescent protein (GFP)-fusion protein localizes to the nucleus"   
Ortho button 4023YML012W   211   YML012W ERV25 SGDID:S000004473, Chr XIII from 246116-246751, Genome Release 64-1-1, Verified ORF, "Protein that forms a heterotrimeric complex with Erp1, Erp2p, and Emp24, member of the p24 family involved in endoplasmic reticulum to Golgi transport"   
Ortho button 4024YML013W   584   YML013W UBX2 SGDID:S000004475, Chr XIII from 244149-245903, Genome Release 64-1-1, Verified ORF, "Protein involved in ER-associated protein degradation; proposed to coordinate the assembly of proteins involved in ERAD; contains a UBX (ubiquitin regulatory X) domain and a ubiquitin-associated (UBA) domain"   
Ortho button 4025YML014W   279   YML014W TRM9 SGDID:S000004476, Chr XIII from 243225-244064, Genome Release 64-1-1, Verified ORF, "tRNA methyltransferase, catalyzes esterification of modified uridine nucleotides in tRNA(Arg3) and tRNA(Glu), likely as part of a complex with Trm112p; deletion confers resistance to zymocin"   
Ortho button 4026YML015C   346   YML015C TAF11 SGDID:S000004477, Chr XIII from 243029-241989, Genome Release 64-1-1, reverse complement, Verified ORF, "TFIID subunit (40 kDa), involved in RNA polymerase II transcription initiation, similar to histone H3 with atypical histone fold motif of Spt3-like transcription factors"   
Ortho button 4027YML016C   692   YML016C PPZ1 SGDID:S000004478, Chr XIII from 241536-239458, Genome Release 64-1-1, reverse complement, Verified ORF, "Serine/threonine protein phosphatase Z, isoform of Ppz2p; involved in regulation of potassium transport, which affects osmotic stability, cell cycle progression, and halotolerance"   
Ortho button 4028YML017W   593   YML017W PSP2 SGDID:S000004479, Chr XIII from 236588-236591,236954-238731, Genome Release 64-1-1, Verified ORF, "Asn rich cytoplasmic protein that contains RGG motifs; high-copy suppressor of group II intron-splicing defects of a mutation in MRS2 and of a conditional mutation in POL1 (DNA polymerase alpha); possible role in mitochondrial mRNA splicing"   
Ortho button 4029YML018C   393   YML018C YML018C SGDID:S000004480, Chr XIII from 235952-234771, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the membrane of the vacuole; physical interaction with Atg27p suggests a possible role in autophagy; YML018C is not an essential gene"   
Ortho button 4030YML019W   332   YML019W OST6 SGDID:S000004481, Chr XIII from 233457-234455, Genome Release 64-1-1, Verified ORF, "Subunit of the oligosaccharyltransferase complex of the ER lumen, which catalyzes asparagine-linked glycosylation of newly synthesized proteins; similar to and partially functionally redundant with Ost3p"   
Ortho button 4031YML020W   664   YML020W YML020W SGDID:S000004482, Chr XIII from 231149-233143, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 4032YML021C   359   YML021C UNG1 SGDID:S000004483, Chr XIII from 230813-229734, Genome Release 64-1-1, reverse complement, Verified ORF, "Uracil-DNA glycosylase, required for repair of uracil in DNA formed by spontaneous cytosine deamination, not required for strand-specific mismatch repair, cell-cycle regulated, expressed in late G1, localizes to mitochondria and nucleus"   
Ortho button 4033YML022W   187   YML022W APT1 SGDID:S000004484, Chr XIII from 228937-229500, Genome Release 64-1-1, Verified ORF, "Adenine phosphoribosyltransferase, catalyzes the formation of AMP from adenine and 5-phosphoribosylpyrophosphate; involved in the salvage pathway of purine nucleotide biosynthesis"   
Ortho button 4034YML023C   556   YML023C NSE5 SGDID:S000004485, Chr XIII from 228664-226994, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential subunit of the Mms21-Smc5-Smc6 complex; required for cell viability and DNA repair"   
Ortho button 4035YML024W   136   YML024W RPS17A SGDID:S000004486, Chr XIII from 225889-225891,226290-226697, Genome Release 64-1-1, Verified ORF, "Ribosomal protein 51 (rp51) of the small (40s) subunit; nearly identical to Rps17Bp and has similarity to rat S17 ribosomal protein"   
Ortho button 4036YML025C   286   YML025C YML6 SGDID:S000004487, Chr XIII from 225239-224406,225365-225339, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial ribosomal protein of the large subunit, has similarity to E. coli L4 ribosomal protein and human mitoribosomal MRP-L4 protein; essential for viability, unlike most other mitoribosomal proteins"   
Ortho button 4037YML026C   146   YML026C RPS18B SGDID:S000004488, Chr XIII from 223380-222987,223828-223782, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps18Ap and has similarity to E. coli S13 and rat S18 ribosomal proteins"   
Ortho button 4038YML027W   385   YML027W YOX1 SGDID:S000004489, Chr XIII from 221406-222563, Genome Release 64-1-1, Verified ORF, "Homeodomain-containing transcriptional repressor, binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; potential Cdc28p substrate"   
Ortho button 4039YML028W   196   YML028W TSA1 SGDID:S000004490, Chr XIII from 220138-220728, Genome Release 64-1-1, Verified ORF, "Thioredoxin peroxidase, acts as both a ribosome-associated and free cytoplasmic antioxidant; self-associates to form a high-molecular weight chaperone complex under oxidative stress; deletion results in mutator phenotype"   
Ortho button 4040YML029W   838   YML029W USA1 SGDID:S000004491, Chr XIII from 217362-219878, Genome Release 64-1-1, Verified ORF, "Scaffold subunit of the Hrd1p ubiquitin ligase that also promotes ligase oligomerization; involved in ER-associated protein degradation (ERAD); interacts with the U1 snRNP-specific protein, Snp1p"   
Ortho button 4041YML030W   159   YML030W AIM31 SGDID:S000004492, Chr XIII from 216435-216914, Genome Release 64-1-1, Verified ORF, "Putative protein of unknown function; GFP-fusion protein localizes to mitochondria; may interact with respiratory chain complexes III or IV; null mutant is viable and displays reduced frequency of mitochondrial genome loss"   
Ortho button 4042YML031W   655   YML031W NDC1 SGDID:S000004493, Chr XIII from 214189-216156, Genome Release 64-1-1, Verified ORF, "Nuclear envelope protein with multiple putative transmembrane domains, required for nuclear pore complex assembly and spindle pole body duplication; required for meiosis II"   
Ortho button 4043YML032C   471   YML032C RAD52 SGDID:S000004494, Chr XIII from 213930-212515, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein that stimulates strand exchange by facilitating Rad51p binding to single-stranded DNA; anneals complementary single-stranded DNA; involved in the repair of double-strand breaks in DNA during vegetative growth and meiosis"   
Ortho button 4044YML034W   834   YML034W SRC1 SGDID:S000004497, Chr XIII from 209525-211444,211571-212155, Genome Release 64-1-1, Verified ORF, "Inner nuclear membrane protein; functions in regulation of subtelomeric genes and is linked to TREX (transcription export) factors; SRC1 produces 2 splice variant proteins with different functions; alternative splicing of SRC1 pre-mRNA is promoted by Hub1p; mutant has aneuploidy tolerance"   
Ortho button 4045YML035C   810   YML035C AMD1 SGDID:S000004498, Chr XIII from 208860-206428, Genome Release 64-1-1, reverse complement, Verified ORF, "AMP deaminase, tetrameric enzyme that catalyzes the deamination of AMP to form IMP and ammonia; may be involved in regulation of intracellular adenine nucleotide pools"   
Ortho button 4046YML036W   181   YML036W CGI121 SGDID:S000004500, Chr XIII from 205642-206097,206204-206293, Genome Release 64-1-1, Verified ORF, "Component of the EKC/KEOPS complex with Bud32p, Kae1p, Pcc1p, and Gon7p; EKC/KEOPS complex is required for t6A tRNA modification and may have roles in telomere maintenance and transcription; Cgi121p is dispensable for tRNA modification"   
Ortho button 4047YML037C   340   YML037C YML037C SGDID:S000004501, Chr XIII from 205408-204386, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function with some characteristics of a transcriptional activator; may be a target of Dbf2p-Mob1p kinase; GFP-fusion protein co-localizes with clathrin-coated vesicles; YML037C is not an essential gene"   
Ortho button 4048YML038C   442   YML038C YMD8 SGDID:S000004502, Chr XIII from 204103-202775, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative nucleotide sugar transporter, has similarity to Vrg4p"   
Ortho button 4049YML039W   1755   YML039W YML039W SGDID:S000004503, Chr XIII from 196628-197932,197934-201896, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
Ortho button 4050YML040W   440   YML040W YML040W SGDID:S000004504, Chr XIII from 196628-197950, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
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