Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 3931 - 3960
1LocusLengthLocus description
Ortho button 3931YLR385C   132   YLR385C SWC7 SGDID:S000004377, Chr XII from 893390-892992, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function, component of the Swr1p complex that incorporates Htz1p into chromatin"   
Ortho button 3932YLR386W   880   YLR386W VAC14 SGDID:S000004378, Chr XII from 893628-896270, Genome Release 64-1-1, Verified ORF, "Protein involved in regulated synthesis of PtdIns(3,5)P(2), in control of trafficking of some proteins to the vacuole lumen via the MVB, and in maintenance of vacuole size and acidity; interacts with Fig4p; activator of Fab1p"   
Ortho button 3933YLR387C   432   YLR387C REH1 SGDID:S000004379, Chr XII from 897672-896374, Genome Release 64-1-1, reverse complement, Verified ORF, "Cytoplasmic 60S subunit biogenesis factor, associates with pre-60S particles; similar to Rei1p and shares partially redundant function in cytoplasmic 60S subunit maturation; contains dispersed C2H2 zinc finger domains"   
Ortho button 3934YLR388W   56   YLR388W RPS29A SGDID:S000004380, Chr XII from 898651-898821, Genome Release 64-1-1, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps29Bp and has similarity to rat S29 and E. coli S14 ribosomal proteins"   
Ortho button 3935YLR389C   1027   YLR389C STE23 SGDID:S000004381, Chr XII from 902660-899577, Genome Release 64-1-1, reverse complement, Verified ORF, "Metalloprotease involved, with homolog Axl1p, in N-terminal processing of pro-a-factor to the mature form; expressed in both haploids and diploids; member of the insulin-degrading enzyme family"   
Ortho button 3936YLR390W   112   YLR390W ECM19 SGDID:S000004382, Chr XII from 903066-903404, Genome Release 64-1-1, Verified ORF, "Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies"   
Ortho button 3937YLR390W-A   238   YLR390W-A CCW14 SGDID:S000006429, Chr XII from 903724-904440, Genome Release 64-1-1, Verified ORF, "Covalently linked cell wall glycoprotein, present in the inner layer of the cell wall"   
Ortho button 3938YLR392C   518   YLR392C ART10 SGDID:S000004384, Chr XII from 906305-904749, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function that contains 2 PY motifs and is ubiquinated by Rsp5p; overexpression confers resistance to arsenite; green fluorescent protein (GFP)-fusion protein localizes it to the cytoplasm; non-essential gene"   
Ortho button 3939YLR393W   279   YLR393W ATP10 SGDID:S000004385, Chr XII from 907079-907918, Genome Release 64-1-1, Verified ORF, "Mitochondrial inner membrane protein required for assembly of the F0 sector of mitochondrial F1F0 ATP synthase, interacts genetically with ATP6"   
Ortho button 3940YLR394W   482   YLR394W CST9 SGDID:S000004386, Chr XII from 907950-909398, Genome Release 64-1-1, Verified ORF, "SUMO E3 ligase; required for synaptonemal complex formation; localizes to synapsis initiation sites on meiotic chromosomes; potential Cdc28p substrate"   
Ortho button 3941YLR395C   78   YLR395C COX8 SGDID:S000004387, Chr XII from 909965-909729, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit VIII of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain"   
Ortho button 3942YLR396C   691   YLR396C VPS33 SGDID:S000004388, Chr XII from 912310-910235, Genome Release 64-1-1, reverse complement, Verified ORF, "ATP-binding protein that is a subunit of the HOPS complex and of the CORVET tethering complex; essential for protein sorting, vesicle docking and fusion at the vacuole"   
Ortho button 3943YLR397C   780   YLR397C AFG2 SGDID:S000004389, Chr XII from 914892-912550, Genome Release 64-1-1, reverse complement, Verified ORF, "ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex; is essential for pre-60S maturation and release of several preribosome maturation factors; may be involved in degradation of aberrant mRNAs"   
Ortho button 3944YLR398C   1287   YLR398C SKI2 SGDID:S000004390, Chr XII from 919019-915156, Genome Release 64-1-1, reverse complement, Verified ORF, "Ski complex component and putative RNA helicase, mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay"   
Ortho button 3945YLR399C   686   YLR399C BDF1 SGDID:S000004391, Chr XII from 921596-919536, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in transcription initiation at TATA-containing promoters; associates with the basal transcription factor TFIID; contains two bromodomains; corresponds to the C-terminal region of mammalian TAF1; redundant with Bdf2p"   
Ortho button 3946YLR401C   668   YLR401C DUS3 SGDID:S000004393, Chr XII from 924448-922442, Genome Release 64-1-1, reverse complement, Verified ORF, "Dihydrouridine synthase, member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus4p; contains a consensus oleate response element (ORE) in its promoter region"   
Ortho button 3947YLR403W   683   YLR403W SFP1 SGDID:S000004395, Chr XII from 925568-927619, Genome Release 64-1-1, Verified ORF, "Transcription factor that controls expression of ribosome biogenesis genes in response to nutrients and stress, regulates G2/M transitions during mitotic cell cycle and DNA-damage response, modulates cell size; regulated by TORC1 and Mrs6p; can form the [ISP+] prion"   
Ortho button 3948YLR404W   285   YLR404W FLD1 SGDID:S000004396, Chr XII from 928743-929600, Genome Release 64-1-1, Verified ORF, "Seipin protein involved in lipid droplet morphology, number, and size; proposed to be involved in lipid metabolism; related to the human BSCL2 which is associated with lipodystrophy"   
Ortho button 3949YLR405W   367   YLR405W DUS4 SGDID:S000004397, Chr XII from 929789-930892, Genome Release 64-1-1, Verified ORF, "Dihydrouridine synthase, member of a widespread family of conserved proteins including Smm1p, Dus1p, and Dus3p"   
Ortho button 3950YLR406C   113   YLR406C RPL31B SGDID:S000004398, Chr XII from 931349-931065,931755-931699, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein component of the large (60S) ribosomal subunit, nearly identical to Rpl31Ap and has similarity to rat L31 ribosomal protein; associates with the karyopherin Sxm1p; loss of both Rpl31p and Rpl39p confers lethality"   
Ortho button 3951YLR406C-A   49   YLR406C-A YLR406C-A SGDID:S000028683, Chr XII from 932355-932206, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 3952YLR407W   228   YLR407W YLR407W SGDID:S000004399, Chr XII from 932967-933653, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; null mutant displays elongated buds and a large fraction of budded cells have only one nucleus"   
Ortho button 3953YLR408C   122   YLR408C BLS1 SGDID:S000004400, Chr XII from 934253-933885, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; likely member of BLOC complex involved in endosomal cargo sorting; green fluorescent protein (GFP)-fusion protein localizes to the endosome; YLR408C is not an essential gene"   
Ortho button 3954YLR409C   939   YLR409C UTP21 SGDID:S000004401, Chr XII from 937233-934414, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of U3-containing 90S preribosome and Small Subunit (SSU) processome complexes involved in production of 18S rRNA and assembly of small ribosomal subunit; synthetic defect with STI1 Hsp90 cochaperone; human homolog linked to glaucoma"   
Ortho button 3955YLR410W   1146   YLR410W VIP1 SGDID:S000004402, Chr XII from 937541-940981, Genome Release 64-1-1, Verified ORF, "Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; IP7 production is important for phosphate signaling; involved in cortical actin cytoskeleton function, and invasive pseudohyphal growth analogous to S. pombe asp1"   
Ortho button 3956YLR410W-A   438   YLR410W-A YLR410W-A SGDID:S000007379, Chr XII from 941483-942799, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
Ortho button 3957YLR410W-B   1770   YLR410W-B YLR410W-B SGDID:S000007380, Chr XII from 941483-942775,942777-946796, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
Ortho button 3958YLR411W   241   YLR411W CTR3 SGDID:S000004403, Chr XII from 947253-947978, Genome Release 64-1-1, Verified ORF, "High-affinity copper transporter of the plasma membrane, acts as a trimer; gene is disrupted by a Ty2 transposon insertion in many laboratory strains of S. cerevisiae"   
Ortho button 3959YLR412C-A   68   YLR412C-A YLR412C-A SGDID:S000028572, Chr XII from 950473-950267, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 3960YLR412W   274   YLR412W BER1 SGDID:S000004404, Chr XII from 948368-949192, Genome Release 64-1-1, Verified ORF, "Protein involved in microtubule-related processes, N-acetylation; GFP-fusion protein localizes to the cytoplasm and is induced in response to the DNA-damaging agent MMS; YLR412W is not an essential gene; similar to Arabidopsis SRR1 gene"   
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