Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 3811 - 3840
1LocusLengthLocus description
Ortho button 3811YLR253W   569   YLR253W YLR253W SGDID:S000004243, Chr XII from 642627-644336, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; transcription is periodic during the metabolic cycle; YLR253W is not an essential gene"   
Ortho button 3812YLR254C   189   YLR254C NDL1 SGDID:S000004244, Chr XII from 644973-644404, Genome Release 64-1-1, reverse complement, Verified ORF, "Homolog of nuclear distribution factor NudE, NUDEL; interacts with Pac1p and regulates dynein targeting to microtubule plus ends"   
Ortho button 3813YLR256W   1502   YLR256W HAP1 SGDID:S000004246, Chr XII from 646415-650923, Genome Release 64-1-1, Verified ORF, "Zinc finger transcription factor involved in the complex regulation of gene expression in response to levels of heme and oxygen; the S288C sequence differs from other strain backgrounds due to a Ty1 insertion in the carboxy terminus"   
Ortho button 3814YLR256W-A   440   YLR256W-A YLR256W-A SGDID:S000007377, Chr XII from 651117-652439, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
Ortho button 3815YLR257W   321   YLR257W YLR257W SGDID:S000004247, Chr XII from 658826-659791, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 3816YLR258W   705   YLR258W GSY2 SGDID:S000004248, Chr XII from 660716-662833, Genome Release 64-1-1, Verified ORF, "Glycogen synthase, similar to Gsy1p; expression induced by glucose limitation, nitrogen starvation, heat shock, and stationary phase; activity regulated by cAMP-dependent, Snf1p and Pho85p kinases as well as by the Gac1p-Glc7p phosphatase"   
Ortho button 3817YLR259C   572   YLR259C HSP60 SGDID:S000004249, Chr XII from 665002-663284, Genome Release 64-1-1, reverse complement, Verified ORF, "Tetradecameric mitochondrial chaperonin required for ATP-dependent folding of precursor polypeptides and complex assembly; prevents aggregation and mediates protein refolding after heat shock; role in mtDNA transmission; phosphorylated"   
Ortho button 3818YLR260W   687   YLR260W LCB5 SGDID:S000004250, Chr XII from 665844-667907, Genome Release 64-1-1, Verified ORF, "Minor sphingoid long-chain base kinase, paralog of Lcb4p responsible for few percent of the total activity, possibly involved in synthesis of long-chain base phosphates, which function as signaling molecules"   
Ortho button 3819YLR262C   215   YLR262C YPT6 SGDID:S000004252, Chr XII from 668891-668244, Genome Release 64-1-1, reverse complement, Verified ORF, "Rab family GTPase, Ras-like GTP binding protein involved in the secretory pathway, required for fusion of endosome-derived vesicles with the late Golgi, maturation of the vacuolar carboxypeptidase Y; has similarity to the human GTPase, Rab6"   
Ortho button 3820YLR262C-A   64   YLR262C-A TMA7 SGDID:S000007246, Chr XII from 669662-669468, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown that associates with ribosomes; null mutant exhibits translation defects, altered polyribosome profiles, and resistance to the translation inhibitor anisomcyin"   
Ortho button 3821YLR263W   827   YLR263W RED1 SGDID:S000004253, Chr XII from 670340-672823, Genome Release 64-1-1, Verified ORF, "Protein component of the synaptonemal complex axial elements, involved in chromosome segregation during the first meiotic division; critical for coupling checkpoint signaling to SC formation; interacts with Hop1p, Mec3p and Ddc1p"   
Ortho button 3822YLR264C-A   38   YLR264C-A YLR264C-A SGDID:S000028808, Chr XII from 673944-673828, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 3823YLR264W   67   YLR264W RPS28B SGDID:S000004254, Chr XII from 673131-673334, Genome Release 64-1-1, Verified ORF, "Protein component of the small (40S) ribosomal subunit; nearly identical to Rps28Ap and has similarity to rat S28 ribosomal protein"   
Ortho button 3824YLR265C   342   YLR265C NEJ1 SGDID:S000004255, Chr XII from 675455-674427, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in regulation of nonhomologous end joining; interacts with DNA ligase IV components Dnl4p and Lif1p; repressed by MAT heterozygosity; regulates cellular distribution of Lif1p"   
Ortho button 3825YLR266C   701   YLR266C PDR8 SGDID:S000004256, Chr XII from 677724-675619, Genome Release 64-1-1, reverse complement, Verified ORF, "Transcription factor; targets include ATP-binding cassette (ABC) transporters, major facilitator superfamily transporters, and other genes involved in the pleiotropic drug resistance (PDR) phenomenon"   
Ortho button 3826YLR267W   570   YLR267W BOP2 SGDID:S000004257, Chr XII from 678212-679924, Genome Release 64-1-1, Uncharacterized ORF, "Protein of unknown function"   
Ortho button 3827YLR268W   214   YLR268W SEC22 SGDID:S000004258, Chr XII from 680200-680844, Genome Release 64-1-1, Verified ORF, "R-SNARE protein; assembles into SNARE complex with Bet1p, Bos1p and Sed5p; cycles between the ER and Golgi complex; involved in anterograde and retrograde transport between the ER and Golgi; synaptobrevin homolog"   
Ortho button 3828YLR270W   350   YLR270W DCS1 SGDID:S000004260, Chr XII from 681186-682238, Genome Release 64-1-1, Verified ORF, "Non-essential hydrolase involved in mRNA decapping, may function in a feedback mechanism to regulate deadenylation, contains pyrophosphatase activity and a HIT (histidine triad) motif; interacts with neutral trehalase Nth1p"   
Ortho button 3829YLR271W   274   YLR271W YLR271W SGDID:S000004261, Chr XII from 682737-683561, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus and is induced in response to the DNA-damaging agent MMS"   
Ortho button 3830YLR272C   1176   YLR272C YCS4 SGDID:S000004262, Chr XII from 687202-683672, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus"   
Ortho button 3831YLR273C   648   YLR273C PIG1 SGDID:S000004263, Chr XII from 691029-689083, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative targeting subunit for the type-1 protein phosphatase Glc7p that tethers it to the Gsy2p glycogen synthase"   
Ortho button 3832YLR274W   775   YLR274W MCM5 SGDID:S000004264, Chr XII from 691555-693882, Genome Release 64-1-1, Verified ORF, "Component of the hexameric MCM complex, which is important for priming origins of DNA replication in G1 and becomes an active ATP-dependent helicase that promotes DNA melting and elongation when activated by Cdc7p-Dbf4p in S-phase"   
Ortho button 3833YLR275W   110   YLR275W SMD2 SGDID:S000004265, Chr XII from 694378-694382,694473-694800, Genome Release 64-1-1, Verified ORF, "Core Sm protein Sm D2; part of heteroheptameric complex (with Smb1p, Smd1p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D2"   
Ortho button 3834YLR276C   594   YLR276C DBP9 SGDID:S000004266, Chr XII from 696830-695046, Genome Release 64-1-1, reverse complement, Verified ORF, "ATP-dependent RNA helicase of the DEAD-box family involved in biogenesis of the 60S ribosomal subunit"   
Ortho button 3835YLR277C   779   YLR277C YSH1 SGDID:S000004267, Chr XII from 699495-697156, Genome Release 64-1-1, reverse complement, Verified ORF, "Putative endoribonuclease, subunit of the mRNA cleavage and polyadenylation specificity complex; required for 3' processing, splicing, and transcriptional termination of mRNAs and snoRNAs"   
Ortho button 3836YLR278C   1341   YLR278C YLR278C SGDID:S000004268, Chr XII from 704024-699999, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Zinc-cluster protein; GFP-fusion protein localizes to the nucleus; mutant shows moderate growth defect on caffeine; has a prion-domain like fragment that increases frequency of [URE3]; YLR278C is not an essential gene"   
Ortho button 3837YLR281C   155   YLR281C YLR281C SGDID:S000004271, Chr XII from 704960-704493, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR281C is not an essential gene"   
Ortho button 3838YLR283W   314   YLR283W YLR283W SGDID:S000004273, Chr XII from 705186-706130, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to mitochondria; YLR283W is not an essential gene"   
Ortho button 3839YLR284C   280   YLR284C ECI1 SGDID:S000004274, Chr XII from 707040-706198, Genome Release 64-1-1, reverse complement, Verified ORF, "Peroxisomal delta3,delta2-enoyl-CoA isomerase, hexameric protein that converts 3-hexenoyl-CoA to trans-2-hexenoyl-CoA, essential for the beta-oxidation of unsaturated fatty acids, oleate-induced"   
Ortho button 3840YLR285C-A   56   YLR285C-A YLR285C-A SGDID:S000028569, Chr XII from 708338-708168, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; identified by fungal homology and RT-PCR"   
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