Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 3721 - 3750
1LocusLengthLocus description
Ortho button 3721YLR157W-D   70   YLR157W-D YLR157W-D SGDID:S000028677, Chr XII from 475764-475976, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching"   
Ortho button 3722YLR157W-E   54   YLR157W-E YLR157W-E SGDID:S000028678, Chr XII from 481873-482037, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; partially overlaps a Ty1 element"   
Ortho button 3723YLR158C   362   YLR158C ASP3-3 SGDID:S000004148, Chr XII from 483637-482549, Genome Release 64-1-1, reverse complement, Verified ORF, "Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; reference strain S288C has four copies of ASP3"   
Ortho button 3724YLR159C-A   43   YLR159C-A YLR159C-A SGDID:S000028566, Chr XII from 485842-485711, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-5"   
Ortho button 3725YLR159W   114   YLR159W YLR159W SGDID:S000004149, Chr XII from 485345-485689, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames encoded near the ribosomal DNA region of chromosome 12"   
Ortho button 3726YLR160C   362   YLR160C ASP3-4 SGDID:S000004150, Chr XII from 487289-486201, Genome Release 64-1-1, reverse complement, Verified ORF, "Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; reference strain S288C has four copies of ASP3"   
Ortho button 3727YLR161W   114   YLR161W YLR161W SGDID:S000004151, Chr XII from 488997-489341, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; YLR156W, YLR159W, and YLR161W are three identical open reading frames encoded near the ribosomal DNA region of chromosome 12"   
Ortho button 3728YLR162W   118   YLR162W YLR162W SGDID:S000004152, Chr XII from 489573-489929, Genome Release 64-1-1, Verified ORF, "Putative protein of unknown function; overexpression confers resistance to the antimicrobial peptide MiAMP1 and causes growth arrest, apoptosis, and increased sensitivity to cobalt chloride"   
Ortho button 3729YLR162W-A   62   YLR162W-A RRT15 SGDID:S000028567, Chr XII from 490406-490594, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; identified in a screen for mutants with decreased levels of rDNA transcription"   
Ortho button 3730YLR163C   462   YLR163C MAS1 SGDID:S000004153, Chr XII from 493254-491866, Genome Release 64-1-1, reverse complement, Verified ORF, "Smaller subunit of the mitochondrial processing protease (MPP), essential processing enzyme that cleaves the N-terminal targeting sequences from mitochondrially imported proteins"   
Ortho button 3731YLR164W   168   YLR164W YLR164W SGDID:S000004154, Chr XII from 493883-494389, Genome Release 64-1-1, Verified ORF, "Mitochondrial inner membrane protein of unknown function; similar to Tim18p and Sdh4p; expression induced by nitrogen limitation in a GLN3, GAT1-dependent manner"   
Ortho button 3732YLR165C   254   YLR165C PUS5 SGDID:S000004155, Chr XII from 495258-494494, Genome Release 64-1-1, reverse complement, Verified ORF, "Pseudouridine synthase, catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability"   
Ortho button 3733YLR166C   871   YLR166C SEC10 SGDID:S000004156, Chr XII from 498044-495429, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential 100kDa subunit of the exocyst complex (Sec3p, Sec5p, Sec6p, Sec8p, Sec10p, Sec15p, Exo70p, and Exo84p), which has the essential function of mediating polarized targeting of secretory vesicles to active sites of exocytosis"   
Ortho button 3734YLR167W   152   YLR167W RPS31 SGDID:S000004157, Chr XII from 498947-499405, Genome Release 64-1-1, Verified ORF, "Fusion protein that is cleaved to yield a ribosomal protein of the small (40S) subunit and ubiquitin; ubiquitin may facilitate assembly of the ribosomal protein into ribosomes; interacts genetically with translation factor eIF2B"   
Ortho button 3735YLR168C   230   YLR168C UPS2 SGDID:S000004158, Chr XII from 500270-499578, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial intermembrane space protein involved in regulation of mitochondrial cardiolipin and phosphatidylethanolamine levels; null has defects in mitochondrial morphology; similar to Ups1p, Ups3p and to human PRELI"   
Ortho button 3736YLR170C   156   YLR170C APS1 SGDID:S000004160, Chr XII from 501049-500579, Genome Release 64-1-1, reverse complement, Verified ORF, "Small subunit of the clathrin-associated adaptor complex AP-1, which is involved in protein sorting at the trans-Golgi network; homolog of the sigma subunit of the mammalian clathrin AP-1 complex"   
Ortho button 3737YLR172C   300   YLR172C DPH5 SGDID:S000004162, Chr XII from 502162-501260, Genome Release 64-1-1, reverse complement, Verified ORF, "Methyltransferase required for synthesis of diphthamide, which is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); not essential for viability; GFP-Dph5p fusion protein localizes to the cytoplasm"   
Ortho button 3738YLR173W   608   YLR173W YLR173W SGDID:S000004163, Chr XII from 502421-504247, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 3739YLR174W   412   YLR174W IDP2 SGDID:S000004164, Chr XII from 504591-505829, Genome Release 64-1-1, Verified ORF, "Cytosolic NADP-specific isocitrate dehydrogenase, catalyzes oxidation of isocitrate to alpha-ketoglutarate; levels are elevated during growth on non-fermentable carbon sources and reduced during growth on glucose"   
Ortho button 3740YLR175W   483   YLR175W CBF5 SGDID:S000004165, Chr XII from 506134-507585, Genome Release 64-1-1, Verified ORF, "Pseudouridine synthase catalytic subunit of box H/ACA small nucleolar ribonucleoprotein particles (snoRNPs), acts on both large and small rRNAs and on snRNA U2; mutations in human ortholog dyskerin cause the disorder dyskeratosis congenita"   
Ortho button 3741YLR176C   811   YLR176C RFX1 SGDID:S000004166, Chr XII from 510232-507797, Genome Release 64-1-1, reverse complement, Verified ORF, "Major transcriptional repressor of DNA-damage-regulated genes, recruits repressors Tup1p and Cyc8p to their promoters; involved in DNA damage and replication checkpoint pathway; similar to a family of mammalian DNA binding RFX1-4 proteins"   
Ortho button 3742YLR177W   628   YLR177W YLR177W SGDID:S000004167, Chr XII from 511054-512940, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; phosphorylated by Dbf2p-Mob1p in vitro; some strains contain microsatellite polymophisms at this locus; YLR177W is not an essential gene"   
Ortho button 3743YLR178C   219   YLR178C TFS1 SGDID:S000004168, Chr XII from 513821-513162, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein that interacts with and inhibits carboxypeptidase Y and Ira2p; phosphatidylethanolamine-binding protein (PEBP) family member; targets to vacuolar membranes during stationary phase; acetylated by NatB N-terminal acetyltransferase"   
Ortho button 3744YLR179C   201   YLR179C YLR179C SGDID:S000004169, Chr XII from 514713-514108, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function with similarity to Tfs1p; transcription is activated by paralogous proteins Yrm1p and Yrr1p along with proteins involved in multidrug resistance; GFP-tagged protein localizes to the cytoplasm and nucleus"   
Ortho button 3745YLR180W   382   YLR180W SAM1 SGDID:S000004170, Chr XII from 515262-516410, Genome Release 64-1-1, Verified ORF, "S-adenosylmethionine synthetase, catalyzes transfer of the adenosyl group of ATP to the sulfur atom of methionine; one of two differentially regulated isozymes (Sam1p and Sam2p)"   
Ortho button 3746YLR181C   330   YLR181C VTA1 SGDID:S000004171, Chr XII from 517670-516678, Genome Release 64-1-1, reverse complement, Verified ORF, "Multivesicular body (MVB) protein involved in endosomal protein sorting; regulates Vps4p activity by promoting its oligomerization; has an N-terminal Vps60- and Did2- binding domain, a linker region, and a C-terminal Vps4p binding domain"   
Ortho button 3747YLR182W   803   YLR182W SWI6 SGDID:S000004172, Chr XII from 517940-520351, Genome Release 64-1-1, Verified ORF, "Transcription cofactor, forms complexes with Swi4p and Mbp1p to regulate transcription at the G1/S transition; involved in meiotic gene expression; cell wall stress induces phosphorylation by Mpk1p, which regulates Swi6p localization"   
Ortho button 3748YLR183C   489   YLR183C TOS4 SGDID:S000004173, Chr XII from 522012-520543, Genome Release 64-1-1, reverse complement, Verified ORF, "Forkhead Associated domain containing protein and putative transcription factor found associated with chromatin; target of SBF transcription factor; expression is periodic and peaks in G1; similar to PLM2"   
Ortho button 3749YLR185W   88   YLR185W RPL37A SGDID:S000004175, Chr XII from 522663-522669,523029-523288, Genome Release 64-1-1, Verified ORF, "Protein component of the large (60S) ribosomal subunit, has similarity to Rpl37Bp and to rat L37 ribosomal protein"   
Ortho button 3750YLR186W   252   YLR186W EMG1 SGDID:S000004176, Chr XII from 523632-524390, Genome Release 64-1-1, Verified ORF, "Member of the alpha/beta knot fold methyltransferase superfamily; required for maturation of 18S rRNA and for 40S ribosome production; interacts with RNA and with S-adenosylmethionine; associates with spindle/microtubules; forms homodimers"   
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