Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 3691 - 3720
1LocusLengthLocus description
Ortho button 3691YLR135W   748   YLR135W SLX4 SGDID:S000004125, Chr XII from 413281-415527, Genome Release 64-1-1, Verified ORF, "Endonuclease involved in processing DNA during recombination and repair; cleaves branched structures in a complex with Slx1p; involved in Rad1p/Rad10p-dependent removal of 3'-nonhomologous tails during DSBR via single-strand annealing"   
Ortho button 3692YLR136C   285   YLR136C TIS11 SGDID:S000004126, Chr XII from 416658-415801, Genome Release 64-1-1, reverse complement, Verified ORF, "mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis"   
Ortho button 3693YLR137W   367   YLR137W RKM5 SGDID:S000004127, Chr XII from 417006-418109, Genome Release 64-1-1, Verified ORF, "Protein lysine methyltransferase; monomethylates Lys-46 of the ribosomal large subunit Rpl1a/Rpl1b; member of the seven beta-strand methyltransferase superfamily; orthologs only found among fungal species"   
Ortho button 3694YLR138W   985   YLR138W NHA1 SGDID:S000004128, Chr XII from 418437-421394, Genome Release 64-1-1, Verified ORF, "Na+/H+ antiporter involved in sodium and potassium efflux through the plasma membrane; required for alkali cation tolerance at acidic pH"   
Ortho button 3695YLR139C   643   YLR139C SLS1 SGDID:S000004129, Chr XII from 423473-421542, Genome Release 64-1-1, reverse complement, Verified ORF, "Mitochondrial membrane protein that coordinates expression of mitochondrially-encoded genes; may facilitate delivery of mRNA to membrane-bound translation machinery"   
Ortho button 3696YLR141W   363   YLR141W RRN5 SGDID:S000004131, Chr XII from 423683-424774, Genome Release 64-1-1, Verified ORF, "Protein involved in transcription of rDNA by RNA polymerase I; transcription factor, member of UAF (upstream activation factor) family along with Rrn9p and Rrn10p"   
Ortho button 3697YLR142W   476   YLR142W PUT1 SGDID:S000004132, Chr XII from 425186-426616, Genome Release 64-1-1, Verified ORF, "Proline oxidase, nuclear-encoded mitochondrial protein involved in utilization of proline as sole nitrogen source; PUT1 transcription is induced by Put3p in the presence of proline and the absence of a preferred nitrogen source"   
Ortho button 3698YLR143W   685   YLR143W YLR143W SGDID:S000004133, Chr XII from 427329-429386, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-tagged protein localizes to the cytoplasm; YLR143W is not an essential gene"   
Ortho button 3699YLR144C   779   YLR144C ACF2 SGDID:S000004134, Chr XII from 432016-429677, Genome Release 64-1-1, reverse complement, Verified ORF, "Intracellular beta-1,3-endoglucanase, expression is induced during sporulation; may have a role in cortical actin cytoskeleton assembly"   
Ortho button 3700YLR145W   201   YLR145W RMP1 SGDID:S000004135, Chr XII from 432168-432773, Genome Release 64-1-1, Verified ORF, "Subunit of RNase MRP, which processes pre-rRNA and has a role in cell cycle-regulated degradation of daughter cell-specific mRNAs; unlike most subunits, not shared between RNase MRP and nuclear RNase P"   
Ortho button 3701YLR146C   300   YLR146C SPE4 SGDID:S000004136, Chr XII from 433725-432823, Genome Release 64-1-1, reverse complement, Verified ORF, "Spermine synthase, required for the biosynthesis of spermine and also involved in biosynthesis of pantothenic acid"   
Ortho button 3702YLR146W-A   62   YLR146W-A YLR146W-A SGDID:S000113566, Chr XII from 433870-434058, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 3703YLR147C   101   YLR147C SMD3 SGDID:S000004137, Chr XII from 434463-434158, Genome Release 64-1-1, reverse complement, Verified ORF, "Core Sm protein Sm D3; part of heteroheptameric complex (with Smb1p, Smd1p, Smd2p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; homolog of human Sm D3"   
Ortho button 3704YLR148W   918   YLR148W PEP3 SGDID:S000004138, Chr XII from 434641-437397, Genome Release 64-1-1, Verified ORF, "Component of CORVET tethering complex; vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis"   
Ortho button 3705YLR149C   730   YLR149C YLR149C SGDID:S000004139, Chr XII from 439823-437631, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; overexpression causes a cell cycle delay or arrest; null mutation results in a decrease in plasma membrane electron transport; YLR149C is not an essential gene"   
Ortho button 3706YLR150W   273   YLR150W STM1 SGDID:S000004140, Chr XII from 440467-441288, Genome Release 64-1-1, Verified ORF, "Protein required for optimal translation under nutrient stress; perturbs association of Yef3p with ribosomes; involved in TOR signaling; binds G4 quadruplex and purine motif triplex nucleic acid; helps maintain telomere structure"   
Ortho button 3707YLR151C   340   YLR151C PCD1 SGDID:S000004141, Chr XII from 442737-441715, Genome Release 64-1-1, reverse complement, Verified ORF, "Peroxisomal nudix pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function to remove potentially toxic oxidized CoA disulfide from peroxisomes to maintain the capacity for beta-oxidation of fatty acids"   
Ortho button 3708YLR152C   576   YLR152C YLR152C SGDID:S000004142, Chr XII from 444688-442958, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; YLR152C is not an essential gene"   
Ortho button 3709YLR153C   683   YLR153C ACS2 SGDID:S000004143, Chr XII from 447575-445524, Genome Release 64-1-1, reverse complement, Verified ORF, "Acetyl-coA synthetase isoform which, along with Acs1p, is the nuclear source of acetyl-coA for histone acetylation; mutants affect global transcription; required for growth on glucose; expressed under anaerobic conditions"   
Ortho button 3710YLR154C   110   YLR154C RNH203 SGDID:S000004144, Chr XII from 448314-447982, Genome Release 64-1-1, reverse complement, Verified ORF, "Ribonuclease H2 subunit, required for RNase H2 activity; related to human AGS3 that causes Aicardi-Goutieres syndrome"   
Ortho button 3711YLR154C-G   49   YLR154C-G YLR154C-G SGDID:S000028561, Chr XII from 462671-462522, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF is contained within RDN25-2 and RDN37-2"   
Ortho button 3712YLR154C-H   43   YLR154C-H YLR154C-H SGDID:S000028562, Chr XII from 468958-468827, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-2"   
Ortho button 3713YLR154W-C   124   YLR154W-C TAR1 SGDID:S000028422, Chr XII from 454696-455070, Genome Release 64-1-1, Verified ORF, "Mitochondrial protein potentially involved in regulation of respiratory metabolism; interacts genetically with RPO41 and physically with Coq5p; encoded within the 25S rRNA gene on the opposite strand"   
Ortho button 3714YLR155C   362   YLR155C ASP3-1 SGDID:S000004145, Chr XII from 470405-469317, Genome Release 64-1-1, reverse complement, Verified ORF, "Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; reference strain S288C has four copies of ASP3"   
Ortho button 3715YLR156C-A   43   YLR156C-A YLR156C-A SGDID:S000028564, Chr XII from 472610-472479, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-3"   
Ortho button 3716YLR156W   114   YLR156W YLR156W SGDID:S000004146, Chr XII from 472113-472457, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; exhibits a two-hybrid interaction with Jsn1p in a large-scale analysis"   
Ortho button 3717YLR157C   362   YLR157C ASP3-2 SGDID:S000004147, Chr XII from 474057-472969, Genome Release 64-1-1, reverse complement, Verified ORF, "Cell-wall L-asparaginase II involved in asparagine catabolism; expression induced during nitrogen starvation; ORF contains a short non-coding RNA that enhances expression of full-length gene; reference strain S288C has four copies of ASP3"   
Ortho button 3718YLR157C-A   440   YLR157C-A YLR157C-A SGDID:S000007373, Chr XII from 481601-480279, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
Ortho button 3719YLR157C-B   1755   YLR157C-B YLR157C-B SGDID:S000007374, Chr XII from 480295-476333,481601-480297, Genome Release 64-1-1, reverse complement, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
Ortho button 3720YLR157C-C   43   YLR157C-C YLR157C-C SGDID:S000028565, Chr XII from 482190-482059, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function identified by fungal homology comparisons and RT-PCR; this ORF partially overlaps RND5-4"   
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