Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 3061 - 3090
1LocusLengthLocus description
Ortho button 3061YJR027W   1755   YJR027W YJR027W SGDID:S000003788, Chr X from 472760-474061,474063-478028, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
Ortho button 3062YJR028W   440   YJR028W YJR028W SGDID:S000003789, Chr X from 478344-479666, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
Ortho button 3063YJR029W   1755   YJR029W YJR029W SGDID:S000003790, Chr X from 478344-479644,479646-483612, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
Ortho button 3064YJR030C   745   YJR030C YJR030C SGDID:S000003791, Chr X from 486196-483959, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; expression repressed in carbon limited vs carbon replete chemostat cultures; YJR030C is a non-essential gene"   
Ortho button 3065YJR031C   1408   YJR031C GEA1 SGDID:S000003792, Chr X from 490812-486586, Genome Release 64-1-1, reverse complement, Verified ORF, "Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs), involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; similar to but not functionally redundant with Gea2p"   
Ortho button 3066YJR032W   393   YJR032W CPR7 SGDID:S000003793, Chr X from 491081-492262, Genome Release 64-1-1, Verified ORF, "Peptidyl-prolyl cis-trans isomerase (cyclophilin), catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; binds to Hsp82p and contributes to chaperone activity"   
Ortho button 3067YJR033C   1357   YJR033C RAV1 SGDID:S000003794, Chr X from 496451-492378, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the RAVE complex (Rav1p, Rav2p, Skp1p), which promotes assembly of the V-ATPase holoenzyme; required for transport between the early and late endosome/PVC and for localization of TGN membrane proteins; potential Cdc28p substrate"   
Ortho button 3068YJR034W   108   YJR034W PET191 SGDID:S000003795, Chr X from 496683-497009, Genome Release 64-1-1, Verified ORF, "Protein required for assembly of cytochrome c oxidase; exists as an oligomer that is integral to the mitochondrial inner membrane and faces the intermembrane space; contains a twin Cx9C motif"   
Ortho button 3069YJR035W   1085   YJR035W RAD26 SGDID:S000003796, Chr X from 497355-500612, Genome Release 64-1-1, Verified ORF, "Protein involved in transcription-coupled nucleotide excision repair of UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein"   
Ortho button 3070YJR036C   892   YJR036C HUL4 SGDID:S000003797, Chr X from 503391-500713, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein with similarity to hect domain E3 ubiquitin-protein ligases, not essential for viability"   
Ortho button 3071YJR039W   1121   YJR039W YJR039W SGDID:S000003800, Chr X from 503936-507301, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies"   
Ortho button 3072YJR040W   779   YJR040W GEF1 SGDID:S000003801, Chr X from 507746-510085, Genome Release 64-1-1, Verified ORF, "Voltage-gated chloride channel localized to the golgi, the endosomal system, and plasma membrane, and involved in cation homeostasis; highly homologous to vertebrate voltage-gated chloride channels"   
Ortho button 3073YJR041C   1174   YJR041C URB2 SGDID:S000003802, Chr X from 513763-510239, Genome Release 64-1-1, reverse complement, Verified ORF, "Nucleolar protein required for normal metabolism of the rRNA primary transcript, proposed to be involved in ribosome biogenesis"   
Ortho button 3074YJR042W   744   YJR042W NUP85 SGDID:S000003803, Chr X from 514055-516289, Genome Release 64-1-1, Verified ORF, "Subunit of the Nup84p subcomplex of the nuclear pore complex (NPC); required for assembly of the subcomplex and also for formation of the nucleocytoplasmic Gsp1p concentration gradient that plays a role in nuclear trafficking; the Nup84 subcomplex has a role in transcription elongation"   
Ortho button 3075YJR043C   350   YJR043C POL32 SGDID:S000003804, Chr X from 517513-516461, Genome Release 64-1-1, reverse complement, Verified ORF, "Third subunit of DNA polymerase delta, involved in chromosomal DNA replication; required for error-prone DNA synthesis in the presence of DNA damage and processivity; interacts with Hys2p, PCNA (Pol30p), and Pol1p"   
Ortho button 3076YJR044C   140   YJR044C VPS55 SGDID:S000003805, Chr X from 519185-518763, Genome Release 64-1-1, reverse complement, Verified ORF, "Late endosomal protein involved in late endosome to vacuole trafficking; functional homolog of human obesity receptor gene-related protein (OB-RGRP)"   
Ortho button 3077YJR045C   654   YJR045C SSC1 SGDID:S000003806, Chr X from 521602-519638, Genome Release 64-1-1, reverse complement, Verified ORF, "Hsp70 family ATPase, constituent of the import motor component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); involved in protein translocation and folding; subunit of SceI endonuclease"   
Ortho button 3078YJR046W   604   YJR046W TAH11 SGDID:S000003807, Chr X from 522048-523862, Genome Release 64-1-1, Verified ORF, "DNA replication licensing factor, required for pre-replication complex assembly"   
Ortho button 3079YJR047C   157   YJR047C ANB1 SGDID:S000003808, Chr X from 525381-524908, Genome Release 64-1-1, reverse complement, Verified ORF, "Translation elongation factor eIF-5A, previously thought to function in translation initiation; similar to and functionally redundant with Hyp2p; undergoes an essential hypusination modification; expressed under anaerobic conditions"   
Ortho button 3080YJR048W   109   YJR048W CYC1 SGDID:S000003809, Chr X from 526335-526664, Genome Release 64-1-1, Verified ORF, "Cytochrome c, isoform 1; electron carrier of the mitochondrial intermembrane space that transfers electrons from ubiquinone-cytochrome c oxidoreductase to cytochrome c oxidase during cellular respiration"   
Ortho button 3081YJR049C   530   YJR049C UTR1 SGDID:S000003810, Chr X from 528476-526884, Genome Release 64-1-1, reverse complement, Verified ORF, "ATP-NADH kinase; phosphorylates both NAD and NADH; active as a hexamer; enhances the activity of ferric reductase (Fre1p)"   
Ortho button 3082YJR050W   235   YJR050W ISY1 SGDID:S000003811, Chr X from 528697-529404, Genome Release 64-1-1, Verified ORF, "Member of NineTeen Complex (NTC) that contains Prp19p and stabilizes U6 snRNA in catalytic forms of spliceosome containing U2, U5, and U6 snRNAs, interacts with Prp16p to modulate splicing fidelity; isy1 syf2 cells have defective spindles"   
Ortho button 3083YJR051W   501   YJR051W OSM1 SGDID:S000003812, Chr X from 529861-531366, Genome Release 64-1-1, Verified ORF, "Fumarate reductase, catalyzes the reduction of fumarate to succinate, required for the reoxidation of intracellular NADH under anaerobic conditions; mutations cause osmotic sensitivity"   
Ortho button 3084YJR052W   565   YJR052W RAD7 SGDID:S000003813, Chr X from 532062-533759, Genome Release 64-1-1, Verified ORF, "Protein that recognizes and binds damaged DNA in an ATP-dependent manner (with Rad16p) during nucleotide excision repair; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex"   
Ortho button 3085YJR053W   574   YJR053W BFA1 SGDID:S000003814, Chr X from 534027-535751, Genome Release 64-1-1, Verified ORF, "Component of the GTPase-activating Bfa1p-Bub2p complex involved in multiple cell cycle checkpoint pathways that control exit from mitosis"   
Ortho button 3086YJR054W   497   YJR054W YJR054W SGDID:S000003815, Chr X from 536056-537549, Genome Release 64-1-1, Uncharacterized ORF, "Vacuolar protein of unknown function; potential Cdc28p substrate"   
Ortho button 3087YJR055W   164   YJR055W HIT1 SGDID:S000003816, Chr X from 538772-539266, Genome Release 64-1-1, Verified ORF, "Protein of unknown function, required for growth at high temperature"   
Ortho button 3088YJR056C   236   YJR056C YJR056C SGDID:S000003817, Chr X from 542502-541792, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to both the cytoplasm and the nucleus"   
Ortho button 3089YJR057W   216   YJR057W CDC8 SGDID:S000003818, Chr X from 544062-544712, Genome Release 64-1-1, Verified ORF, "Thymidylate and uridylate kinase, functions in de novo biosynthesis of pyrimidine deoxyribonucleotides; converts dTMP to dTDP and dUMP to dUTP; essential for mitotic and meiotic DNA replication; homologous to S. pombe Tmp1p"   
Ortho button 3090YJR058C   147   YJR058C APS2 SGDID:S000003819, Chr X from 545175-544732, Genome Release 64-1-1, reverse complement, Verified ORF, "Small subunit of the clathrin-associated adaptor complex AP-2, which is involved in protein sorting at the plasma membrane; related to the sigma subunit of the mammalian plasma membrane clathrin-associated protein (AP-2) complex"   
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