Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 2851 - 2880
1LocusLengthLocus description
Ortho button 2851YJL025W   514   YJL025W RRN7 SGDID:S000003562, Chr X from 393967-395511, Genome Release 64-1-1, Verified ORF, "Component of the core factor (CF) rDNA transcription factor complex; CF is required for transcription of 35S rRNA genes by RNA polymerase I and is composed of Rrn6p, Rrn7p, and Rrn11p"   
Ortho button 2852YJL026W   399   YJL026W RNR2 SGDID:S000003563, Chr X from 392404-393603, Genome Release 64-1-1, Verified ORF, "Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits"   
Ortho button 2853YJL027C   138   YJL027C YJL027C SGDID:S000003564, Chr X from 392249-391833, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 2854YJL028W   111   YJL028W YJL028W SGDID:S000003565, Chr X from 391311-391646, Genome Release 64-1-1, Verified ORF, "Protein of unknown function; may interact with ribosomes, based on co-purification experiments"   
Ortho button 2855YJL029C   822   YJL029C VPS53 SGDID:S000003566, Chr X from 390853-388385, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the GARP (Golgi-associated retrograde protein) complex, Vps51p-Vps52p-Vps53p-Vps54p, which is required for the recycling of proteins from endosomes to the late Golgi; required for vacuolar protein sorting"   
Ortho button 2856YJL030W   196   YJL030W MAD2 SGDID:S000003567, Chr X from 387657-388247, Genome Release 64-1-1, Verified ORF, "Component of the spindle-assembly checkpoint complex; delays the onset of anaphase in cells with defects in mitotic spindle assembly; forms a complex with Mad1p; regulates APC/C activity during prometaphase and metaphase of meiosis I"   
Ortho button 2857YJL031C   327   YJL031C BET4 SGDID:S000003568, Chr X from 387348-386368,387438-387436, Genome Release 64-1-1, reverse complement, Verified ORF, "Alpha subunit of Type II geranylgeranyltransferase required for vesicular transport between the endoplasmic reticulum and the Golgi; provides a membrane attachment moiety to Rab-like proteins Ypt1p and Sec4p"   
Ortho button 2858YJL033W   770   YJL033W HCA4 SGDID:S000003570, Chr X from 383837-386149, Genome Release 64-1-1, Verified ORF, "Putative nucleolar DEAD box RNA helicase; high-copy number suppression of a U14 snoRNA processing mutant suggests an involvement in 18S rRNA synthesis"   
Ortho button 2859YJL034W   682   YJL034W KAR2 SGDID:S000003571, Chr X from 381327-383375, Genome Release 64-1-1, Verified ORF, "ATPase involved in protein import into the ER, also acts as a chaperone to mediate protein folding in the ER and may play a role in ER export of soluble proteins; regulates the unfolded protein response via interaction with Ire1p"   
Ortho button 2860YJL035C   250   YJL035C TAD2 SGDID:S000003572, Chr X from 381001-380249, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of tRNA-specific adenosine-34 deaminase, forms a heterodimer with Tad3p that converts adenosine to inosine at the wobble position of several tRNAs"   
Ortho button 2861YJL036W   423   YJL036W SNX4 SGDID:S000003573, Chr X from 378825-380096, Genome Release 64-1-1, Verified ORF, "Sorting nexin, involved in retrieval of late-Golgi SNAREs from post-Golgi endosomes to the trans-Golgi network and in cytoplasm to vacuole transport; contains a PX phosphoinositide-binding domain; forms complexes with Snx41p and with Atg20p"   
Ortho button 2862YJL037W   224   YJL037W IRC18 SGDID:S000003574, Chr X from 376662-377336, Genome Release 64-1-1, Verified ORF, "Putative protein of unknown function; expression induced in respiratory-deficient cells and in carbon-limited chemostat cultures; similar to adjacent ORF, YJL038C; null mutant displays increased levels of spontaneous Rad52p foci"   
Ortho button 2863YJL038C   219   YJL038C LOH1 SGDID:S000003575, Chr X from 375774-375115, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein of unknown function with proposed roles in maintenance of genome integrity and also in spore wall assembly; induced during sporulation; repressed during vegetative growth by Sum1p and Hst1p; sequence similar to IRC1"   
Ortho button 2864YJL039C   1683   YJL039C NUP192 SGDID:S000003576, Chr X from 373799-368748, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential structural subunit of the nuclear pore complex (NPC), localizes to the nuclear periphery of nuclear pores, homologous to human p205"   
Ortho button 2865YJL041W   823   YJL041W NSP1 SGDID:S000003577, Chr X from 365784-365784,365903-368373, Genome Release 64-1-1, Verified ORF, "Essential component of the nuclear pore complex, which mediates nuclear import and export, found in both the Nup82 and Nic96 complexes"   
Ortho button 2866YJL042W   1398   YJL042W MHP1 SGDID:S000003578, Chr X from 361249-365445, Genome Release 64-1-1, Verified ORF, "Microtubule-associated protein involved in assembly and stabilization of microtubules; overproduction results in cell cycle arrest at G2 phase; similar to Drosophila protein MAP and to mammalian MAP4 proteins"   
Ortho button 2867YJL043W   257   YJL043W YJL043W SGDID:S000003579, Chr X from 360130-360903, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; YJL043W is a non-essential gene"   
Ortho button 2868YJL044C   458   YJL044C GYP6 SGDID:S000003580, Chr X from 359676-358300, Genome Release 64-1-1, reverse complement, Verified ORF, "GTPase-activating protein (GAP) for the yeast Rab family member, Ypt6p; involved in vesicle mediated protein transport"   
Ortho button 2869YJL045W   634   YJL045W YJL045W SGDID:S000003581, Chr X from 356024-357928, Genome Release 64-1-1, Verified ORF, "Minor succinate dehydrogenase isozyme; homologous to Sdh1p, the major isozyme reponsible for the oxidation of succinate and transfer of electrons to ubiquinone; induced during the diauxic shift in a Cat8p-dependent manner"   
Ortho button 2870YJL046W   409   YJL046W AIM22 SGDID:S000003582, Chr X from 352386-353615, Genome Release 64-1-1, Verified ORF, "Putative lipoate-protein ligase, required along with Lip2 and Lip5 for lipoylation of Lat1p and Kgd2p; similar to E. coli LplA; null mutant displays reduced frequency of mitochondrial genome loss"   
Ortho button 2871YJL047C   842   YJL047C RTT101 SGDID:S000003583, Chr X from 352108-349580, Genome Release 64-1-1, reverse complement, Verified ORF, "Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex with a role in anaphase progression; implicated in Mms22-dependent DNA repair; involved with Mms1p in nonfunctional rRNA decay; modified by the ubiquitin-like protein, Rub1p"   
Ortho button 2872YJL047C-A   44   YJL047C-A YJL047C-A SGDID:S000028804, Chr X from 349178-349044, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 2873YJL048C   396   YJL048C UBX6 SGDID:S000003584, Chr X from 348637-347447, Genome Release 64-1-1, reverse complement, Verified ORF, "UBX (ubiquitin regulatory X) domain-containing protein that interacts with Cdc48p, transcription is repressed when cells are grown in media containing inositol and choline"   
Ortho button 2874YJL049W   450   YJL049W YJL049W SGDID:S000003585, Chr X from 345973-347325, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function; YJL049W is a non-essential gene"   
Ortho button 2875YJL050W   1073   YJL050W MTR4 SGDID:S000003586, Chr X from 342522-345743, Genome Release 64-1-1, Verified ORF, "ATP-dependent 3'-5' RNA helicase of the Dead-box family, involved in nuclear RNA processing and degradation both as a component of the TRAMP complex and in TRAMP independent processes; has a KOW domain that shows RNA binding activity"   
Ortho button 2876YJL051W   822   YJL051W IRC8 SGDID:S000003587, Chr X from 339787-342255, Genome Release 64-1-1, Verified ORF, "Bud tip localized protein of unknown function; mRNA is targeted to the bud by a She2p dependent transport system; mRNA is cell cycle regulated via Fkh2p, peaking in G2/M phase; null mutant displays increased levels of spontaneous Rad52p foc"   
Ortho button 2877YJL052C-A   39   YJL052C-A YJL052C-A SGDID:S000007610, Chr X from 338003-337884, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function, identified based on comparison to related yeast species"   
Ortho button 2878YJL052W   332   YJL052W TDH1 SGDID:S000003588, Chr X from 338271-339269, Genome Release 64-1-1, Verified ORF, "Glyceraldehyde-3-phosphate dehydrogenase, isozyme 1, involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall"   
Ortho button 2879YJL053W   379   YJL053W PEP8 SGDID:S000003589, Chr X from 335898-337037, Genome Release 64-1-1, Verified ORF, "Vacuolar protein sorting protein that forms part of the multimeric membrane-associated retromer complex along with Vps35p, Vps29p, Vps17p, and Vps5p; essential for endosome-to-Golgi retrograde protein transport"   
Ortho button 2880YJL054W   478   YJL054W TIM54 SGDID:S000003590, Chr X from 334265-335701, Genome Release 64-1-1, Verified ORF, "Component of the mitochondrial TIM22 complex involved in insertion of polytopic proteins into the inner membrane"   
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