Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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Genome Summary: Searched sequences
Species:
Saccharomyces cerevisiae S288C
Number of sequences:
5887
records
Previous ‹‹ ›› Next Total records: 0 1171 - 1200
1LocusLengthLocus description
Ortho button 1171YDR288W   303   YDR288W NSE3 SGDID:S000002696, Chr IV from 1037195-1038106, Genome Release 64-1-1, Verified ORF, "Essential subunit of the Mms21-Smc5-Smc6 complex; protein of unknown function; required for DNA repair and growth"   
Ortho button 1172YDR289C   409   YDR289C RTT103 SGDID:S000002697, Chr IV from 1039509-1038280, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein that interacts with exonuclease Rat1p and Rai1p and plays a role in transcription termination by RNA polymerase II, has an RPR domain (carboxy-terminal domain interacting domain); also involved in regulation of Ty1 transposition"   
Ortho button 1173YDR291W   1077   YDR291W HRQ1 SGDID:S000002699, Chr IV from 1039728-1042961, Genome Release 64-1-1, Uncharacterized ORF, "Putative RecQ helicase; belongs to the widely conserved RecQ family of proteins which are involved in maintaining genomic integrity; similar to the human RecQ4p implicated in Rothmund-Thomson syndrome(RTS)"   
Ortho button 1174YDR292C   621   YDR292C SRP101 SGDID:S000002700, Chr IV from 1045011-1043146, Genome Release 64-1-1, reverse complement, Verified ORF, "Signal recognition particle (SRP) receptor alpha subunit; contain GTPase domains; involved in SRP-dependent protein targeting; interacts with the beta subunit, Srp102p"   
Ortho button 1175YDR293C   1250   YDR293C SSD1 SGDID:S000002701, Chr IV from 1049392-1045640, Genome Release 64-1-1, reverse complement, Verified ORF, "Translational repressor with a role in cell wall polar growth and integrity; regulated by Cbk1p phosphorylation to effect bud-specific translational control of specific mRNAs; interacts with TOR pathway components"   
Ortho button 1176YDR294C   589   YDR294C DPL1 SGDID:S000002702, Chr IV from 1052228-1050459, Genome Release 64-1-1, reverse complement, Verified ORF, "Dihydrosphingosine phosphate lyase, regulates intracellular levels of sphingolipid long-chain base phosphates (LCBPs), degrades phosphorylated long chain bases, prefers C16 dihydrosphingosine-l-phosphate as a substrate"   
Ortho button 1177YDR295C   674   YDR295C HDA2 SGDID:S000002703, Chr IV from 1054647-1052623, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex containing an Hda1p homodimer and an Hda2p-Hda3p heterodimer; involved in telomere maintenance"   
Ortho button 1178YDR296W   226   YDR296W MHR1 SGDID:S000002704, Chr IV from 1055212-1055892, Genome Release 64-1-1, Verified ORF, "Protein involved in homologous recombination in mitochondria; required for recombination-dependent mtDNA partitioning; involved in stimulation of mitochondrial DNA replication in response to oxidative stress"   
Ortho button 1179YDR297W   349   YDR297W SUR2 SGDID:S000002705, Chr IV from 1056551-1057600, Genome Release 64-1-1, Verified ORF, "Sphinganine C4-hydroxylase, catalyses the conversion of sphinganine to phytosphingosine in sphingolipid biosyntheis"   
Ortho button 1180YDR298C   212   YDR298C ATP5 SGDID:S000002706, Chr IV from 1058814-1058176, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit 5 of the stator stalk of mitochondrial F1F0 ATP synthase, which is an evolutionarily conserved enzyme complex required for ATP synthesis; homologous to bovine subunit OSCP (oligomycin sensitivity-conferring protein); phosphorylated"   
Ortho button 1181YDR299W   534   YDR299W BFR2 SGDID:S000002707, Chr IV from 1059627-1061231, Genome Release 64-1-1, Verified ORF, "Essential protein that is a component of 90S preribosomes; may be involved in rRNA processing; multicopy suppressor of sensitivity to Brefeldin A; expression is induced during lag phase and also by cold shock"   
Ortho button 1182YDR300C   428   YDR300C PRO1 SGDID:S000002708, Chr IV from 1062791-1061505, Genome Release 64-1-1, reverse complement, Verified ORF, "Gamma-glutamyl kinase, catalyzes the first step in proline biosynthesis"   
Ortho button 1183YDR301W   1357   YDR301W CFT1 SGDID:S000002709, Chr IV from 1063352-1067425, Genome Release 64-1-1, Verified ORF, "RNA-binding subunit of the mRNA cleavage and polyadenylation factor; involved in poly(A) site recognition and required for both pre-mRNA cleavage and polyadenylation, 51% sequence similarity with mammalian AAUAA-binding subunit of CPSF"   
Ortho button 1184YDR302W   219   YDR302W GPI11 SGDID:S000002710, Chr IV from 1067731-1068390, Genome Release 64-1-1, Verified ORF, "ER membrane protein involved in a late step of glycosylphosphatidylinositol (GPI) anchor assembly; involved in the addition of phosphoethanolamine to the multiply mannosylated GPI intermediate; human PIG-Fp is a functional homolog"   
Ortho button 1185YDR303C   885   YDR303C RSC3 SGDID:S000002711, Chr IV from 1071386-1068729, Genome Release 64-1-1, reverse complement, Verified ORF, "Component of the RSC chromatin remodeling complex; essential gene required for maintenance of proper ploidy and regulation of ribosomal protein genes and the cell wall/stress response; highly similar to Rsc30p"   
Ortho button 1186YDR304C   225   YDR304C CPR5 SGDID:S000002712, Chr IV from 1072557-1071880, Genome Release 64-1-1, reverse complement, Verified ORF, "Peptidyl-prolyl cis-trans isomerase (cyclophilin) of the endoplasmic reticulum, catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; transcriptionally induced in response to unfolded proteins in the ER"   
Ortho button 1187YDR305C   217   YDR305C HNT2 SGDID:S000002713, Chr IV from 1073312-1072746,1073488-1073402, Genome Release 64-1-1, reverse complement, Verified ORF, "Dinucleoside triphosphate hydrolase; has similarity to the tumor suppressor FHIT and belongs to the histidine triad (HIT) superfamily of nucleotide-binding proteins"   
Ortho button 1188YDR306C   478   YDR306C YDR306C SGDID:S000002714, Chr IV from 1075171-1073735, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "F-box protein of unknown function; interacts with Sgt1p via a Leucine-Rich Repeat (LRR) domain"   
Ortho button 1189YDR307W   662   YDR307W YDR307W SGDID:S000002715, Chr IV from 1075865-1077853, Genome Release 64-1-1, Uncharacterized ORF, "Putative protein of unknown function"   
Ortho button 1190YDR308C   140   YDR308C SRB7 SGDID:S000002716, Chr IV from 1078449-1078027, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of the RNA polymerase II mediator complex; associates with core polymerase subunits to form the RNA polymerase II holoenzyme; essential for transcriptional regulation; target of the global repressor Tup1p"   
Ortho button 1191YDR309C   383   YDR309C GIC2 SGDID:S000002717, Chr IV from 1080199-1079048, Genome Release 64-1-1, reverse complement, Verified ORF, "Redundant rho-like GTPase Cdc42p effector; homolog of Gic1p; involved in initiation of budding and cellular polarization; interacts with Cdc42p via the Cdc42/Rac-interactive binding (CRIB) domain and with PI(4,5)P2 via a polybasic region"   
Ortho button 1192YDR310C   1062   YDR310C SUM1 SGDID:S000002718, Chr IV from 1084316-1081128, Genome Release 64-1-1, reverse complement, Verified ORF, "Transcriptional repressor required for mitotic repression of middle sporulation-specific genes; also acts as general replication initiation factor; involved in telomere maintenance, chromatin silencing; regulated by pachytene checkpoint"   
Ortho button 1193YDR311W   642   YDR311W TFB1 SGDID:S000002719, Chr IV from 1085065-1086993, Genome Release 64-1-1, Verified ORF, "Subunit of TFIIH and nucleotide excision repair factor 3 complexes, required for nucleotide excision repair, target for transcriptional activators"   
Ortho button 1194YDR312W   453   YDR312W SSF2 SGDID:S000002720, Chr IV from 1087581-1088942, Genome Release 64-1-1, Verified ORF, "Protein required for ribosomal large subunit maturation, functionally redundant with Ssf1p; member of the Brix family"   
Ortho button 1195YDR313C   286   YDR313C PIB1 SGDID:S000002721, Chr IV from 1090079-1089219, Genome Release 64-1-1, reverse complement, Verified ORF, "RING-type ubiquitin ligase of the endosomal and vacuolar membranes, binds phosphatidylinositol(3)-phosphate; contains a FYVE finger domain"   
Ortho button 1196YDR314C   692   YDR314C RAD34 SGDID:S000002722, Chr IV from 1092511-1090433, Genome Release 64-1-1, reverse complement, Verified ORF, "Protein involved in nucleotide excision repair (NER); homologous to RAD4"   
Ortho button 1197YDR315C   281   YDR315C IPK1 SGDID:S000002723, Chr IV from 1093586-1092741, Genome Release 64-1-1, reverse complement, Verified ORF, "Inositol 1,3,4,5,6-pentakisphosphate 2-kinase, nuclear protein required for synthesis of 1,2,3,4,5,6-hexakisphosphate (phytate), which is integral to cell function; has 2 motifs conserved in other fungi; ipk1 gle1 double mutant is inviable"   
Ortho button 1198YDR316W   471   YDR316W OMS1 SGDID:S000002724, Chr IV from 1093763-1095178, Genome Release 64-1-1, Verified ORF, "Protein integral to the mitochondrial membrane; has a conserved methyltransferase motif; multicopy suppressor of respiratory defects caused by OXA1 mutations"   
Ortho button 1199YDR316W-A   440   YDR316W-A YDR316W-A SGDID:S000007398, Chr IV from 1096064-1097386, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag gene co-transcribed with TYB Pol; translated as TYA or TYA-TYB polyprotein; Gag is a nucleocapsid protein that is the structural constituent of virus-like particles (VLPs); similar to retroviral Gag"   
Ortho button 1200YDR316W-B   1755   YDR316W-B YDR316W-B SGDID:S000007399, Chr IV from 1096064-1097368,1097370-1101332, Genome Release 64-1-1, transposable_element_gene, "Retrotransposon TYA Gag and TYB Pol genes; transcribed/translated as one unit; polyprotein is processed to make a nucleocapsid-like protein (Gag), reverse transcriptase (RT), protease (PR), and integrase (IN); similar to retroviral genes"   
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