Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Candida albicans WO1
Locus:
CAWG_00015
Length:
73
Number of sequences:
5931
Description:
DNA-directed RNA polymerases I
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P40422    70   RPAB4_YEAST DNA-directed RNA polymerases I, I...681e-24     92.8     56     81GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IC:SGD.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006360; P:transcription from RNA polymerase I promoter; IMP:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006383; P:transcription from RNA polymerase III promoter; IMP:SGD.
2P48011    63   RPAB4_SCHPO DNA-directed RNA polymerases I, I...620.0000000000002     63.5     48     63GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IGI:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; IGI:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:PomBase.
GO:0006360; P:transcription from RNA polymerase I promoter; IGI:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IGI:PomBase.::GO:0006383; P:transcription from RNA polymerase III promoter; IGI:PomBase.
3P53803    58   RPAB4_HUMAN DNA-directed RNA polymerases I, I...420.000000001     53.5     50     69GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; TAS:ProtInc.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006356; P:regulation of transcription from RNA polymerase I promoter; TAS:ProtInc.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
4Q3ZBC0    58   RPAB4_BOVIN DNA-directed RNA polymerases I, I...420.000000001     53.5     50     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
5Q54R66    46   RPAB4_DICDI DNA-directed RNA polymerases I, I...420.000000001     53.1     45     69GO:0005736; C:DNA-directed RNA polymerase I complex; ISS:dictyBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:dictyBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; ISS:dictyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:dictyBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006360; P:transcription from RNA polymerase I promoter; ISS:dictyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:dictyBase.::GO:0006383; P:transcription from RNA polymerase III promoter; ISS:dictyBase.
6Q63871    58   RPAB4_MOUSE DNA-directed RNA polymerases I, I...420.000000001     53.5     50     69GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
7Q3IMF0    44   RPOP_NATPD DNA-directed RNA polymerase subuni...410.001     37     34     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
8Q9HSG9    44   RPOP_HALSA DNA-directed RNA polymerase subuni...340.005     35     38     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
9B0R2Y0    44   RPOP_HALS3 DNA-directed RNA polymerase subuni...340.005     35     38     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
10Q5V1M2    44   RPOP_HALMA DNA-directed RNA polymerase subuni...330.005     35     39     61
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
11B9LTN3    44   RPOP_HALLT DNA-directed RNA polymerase subuni...320.007     34.7     41     59
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
12Q18KN3    44   RPOP_HALWD DNA-directed RNA polymerase subuni...360.011     33.9     36     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
13O74105    49   RPOP_PYRHO DNA-directed RNA polymerase subuni...360.017     33.5     39     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
14Q9V201    49   RPOP_PYRAB DNA-directed RNA polymerase subuni...360.035     32.7     39     56
GO:0003677; F:DNA binding; IEA:HAMAP.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:HAMAP.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
15B6YTZ7    49   RPOP_THEON DNA-directed RNA polymerase subuni...360.037     32.7     36     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
16Q0W2Y5    45   RPOP_UNCMA DNA-directed RNA polymerase subuni...330.044     32.3     39     58
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
17Q5JDM8    49   RPOP_PYRKO DNA-directed RNA polymerase subuni...360.14     30.8     33     56
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
18Q8TZI3    49   RPOP_PYRFU DNA-directed RNA polymerase subuni...360.2     30.4     36     53
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
19Q4JAE8    48   RPOP_SULAC DNA-directed RNA polymerase subuni...360.21     30.4     36     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
20Q8TYC4    51   RPOP_METKA DNA-directed RNA polymerase subuni...440.25     30.4     34     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
21Q975R9    48   RPOP_SULTO DNA-directed RNA polymerase subuni...360.34     30     36     47
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
22P61934    45   RPOP_METMA DNA-directed RNA polymerase subuni...420.37     29.6     33     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
23Q469M0    45   RPOP_METBF DNA-directed RNA polymerase subuni...420.37     29.6     33     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
24P61933    45   RPOP_METAC DNA-directed RNA polymerase subuni...420.37     29.6     33     50
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
25Q12ZB4    46   RPOP_METBU DNA-directed RNA polymerase subuni...350.46     29.6     37     51
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
26Q97ZX7    48   RPOP_SULSO DNA-directed RNA polymerase subuni...350.6     29.3     31     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
27C3N740    48   RPOP_SULIY DNA-directed RNA polymerase subuni...350.6     29.3     31     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
28C3NGJ6    48   RPOP_SULIN DNA-directed RNA polymerase subuni...350.6     29.3     31     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
29C3MWV9    48   RPOP_SULIM DNA-directed RNA polymerase subuni...350.6     29.3     31     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
30C3MQX1    48   RPOP_SULIL DNA-directed RNA polymerase subuni...350.6     29.3     31     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
31C4KI98    48   RPOP_SULIK DNA-directed RNA polymerase subuni...350.6     29.3     31     54
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
records
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