Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Coccidiodis immitis RMSCC 3703
Locus:
CISG_00003
Length:
353
Number of sequences:
10463
Description:
transcription initiation factor IIB
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1O13749    340   TF2B_SCHPO Transcription initiation factor II...3349e-112     336     54     66GO:0005634; C:nucleus; IDA:PomBase.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:PomBase.
2Q05959    357   TF2B_KLULA Transcription initiation factor II...3354e-83     263     42     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
3P29055    345   TF2B_YEAST Transcription initiation factor II...3352e-74     240     39     56GO:0005634; C:nucleus; IDA:SGD.
GO:0001139; F:core RNA polymerase II recruiting transcription factor activity; IDA:SGD.::GO:0000993; F:RNA polymerase II core binding; IDA:SGD.::GO:0017025; F:TBP-class protein binding; IDA:SGD.::GO:0001129; F:TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly; IDA:SGD.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:2000679; P:positive regulation of transcription regulatory region DNA binding; IDA:SGD.::GO:0001113; P:transcriptional open complex formation at RNA polymerase II promoter; IMP:SGD.::GO:0001174; P:transcriptional start site selection at RNA polymerase II promoter; IMP:SGD.
4Q54FD6    325   TF2B_DICDI Transcription initiation factor II...3247e-72     233     41     58GO:0005654; C:nucleoplasm; ISS:dictyBase.
GO:0001139; F:core RNA polymerase II recruiting transcription factor activity; ISS:dictyBase.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
5P29054    316   TF2B_XENLA Transcription initiation factor II...800.59     35.4     29     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
6P62916    316   TF2B_RAT Transcription initiation factor IIB ...800.64     35.4     28     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
7P62915    316   TF2B_MOUSE Transcription initiation factor II...800.64     35.4     28     51GO:0005634; C:nucleus; IDA:MGI.
GO:0003677; F:DNA binding; IDA:MGI.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
8Q5R886    316   TF2B_PONAB Transcription initiation factor II...800.62     35.4     28     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
9Q4R3J5    316   TF2B_MACFA Transcription initiation factor II...800.62     35.4     28     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
10Q00403    316   TF2B_HUMAN Transcription initiation factor II...800.62     35.4     28     51GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0046966; F:thyroid hormone receptor binding; IPI:UniProtKB.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
11Q2KIN8    316   TF2B_BOVIN Transcription initiation factor II...800.6     35.4     28     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
12P29052    315   TF2B_DROME Transcription initiation factor II...3124e-64     212     39     55GO:0005667; C:transcription factor complex; ISS:FlyBase.
GO:0008134; F:transcription factor binding; IPI:FlyBase.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051101; P:regulation of DNA binding; IDA:FlyBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0001174; P:transcriptional start site selection at RNA polymerase II promoter; IDA:FlyBase.
13O16991    306   TF2B_CAEEL Transcription initiation factor II...2983e-59     199     40     58GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
14Q8SRP3    312   TF2B_ENCCU Transcription initiation factor II...3106e-56     191     37     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
15Q8W0W3    312   TF2B_ORYSJ Transcription initiation factor II...3297e-51     177     36     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
16P48513    313   TF2B_SOYBN Transcription initiation factor II...3308e-49     172     35     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
17Q9SS44    312   TF2B2_ARATH Transcription initiation factor I...3291e-48     171     35     51GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
18Q9NHP7    293   TF2B_DROVI Transcription initiation factor II...809.4     31.6     28     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
19P48512    312   TF2B1_ARATH Transcription initiation factor I...3281e-45     163     33     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
20P61999    300   TF2B_PYRWO Transcription initiation factor II...3087e-41     150     31     50
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
21P61998    300   TF2B_PYRFU Transcription initiation factor II...3087e-41     150     31     50
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
22Q9HJM7    312   TF2B1_THEAC Transcription initiation factor I...3149e-40     148     30     49
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
23O59151    300   TF2B_PYRHO Transcription initiation factor II...3082e-39     147     31     49
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
24Q9V0V5    300   TF2B_PYRAB Transcription initiation factor II...3082e-39     146     31     49
GO:0003700; F:sequence-specific DNA binding transcription factor activity; IEA:HAMAP.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:HAMAP.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:HAMAP.
25Q979Q3    312   TF2B1_THEVO Transcription initiation factor I...3144e-39     146     30     49
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
26O28970    326   TF2B_ARCFU Transcription initiation factor II...3145e-39     146     31     47
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
27Q5JGN1    300   TF2B1_PYRKO Transcription initiation factor I...3138e-39     145     29     50
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
28Q2NEL6    311   TF2B_METST Transcription initiation factor II...3133e-38     144     29     49
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
29O26971    310   TF2B_METTH Transcription initiation factor II...803.2     33.1     30     46
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
30B8GJQ9    334   TF2B_METPE Transcription initiation factor II...3142e-36     139     31     49
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
31A5UKA1    310   TF2B_METS3 Transcription initiation factor II...3198e-36     137     28     47
GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
records
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