Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Coccidiodis immitis RMSCC 2394
Locus:
CIRG_00007
Length:
1144
Number of sequences:
10408
Description:
DNA damage binding protein 1b
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q9M0V3    1088   DDB1A_ARATH DNA damage-binding protein 1a OS=...11707e-142     462     30     50GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0010100; P:negative regulation of photomorphogenesis; IGI:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IPI:TAIR.::GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
2O49552    1088   DDB1B_ARATH DNA damage-binding protein 1b OS=...11645e-136     447     30     49GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:TAIR.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
3Q6QNU4    1090   DDB1_SOLLC DNA damage-binding protein 1 OS=So...11718e-134     441     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
4Q6E7D1    1095   DDB1_SOLCE DNA damage-binding protein 1 OS=ch...11763e-132     437     29     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0009585; P:red, far-red light phototransduction; IEA:UniProtKB-KW.
5Q6P6Z0    1140   DDB1_XENLA DNA damage-binding protein 1 OS=Xe...12196e-130     432     28     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
6P33194    1140   DDB1_CHLAE DNA damage-binding protein 1 OS=Ch...12194e-125     419     27     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
7Q16531    1140   DDB1_HUMAN DNA damage-binding protein 1 OS=Ho...12195e-125     418     27     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003684; F:damaged DNA binding; TAS:ProtInc.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000075; P:cell cycle checkpoint; IMP:UniProtKB.::GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; IMP:UniProtKB.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
8Q5R649    1140   DDB1_PONAB DNA damage-binding protein 1 OS=Po...12199e-125     417     27     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
9A1A4K3    1140   DDB1_BOVIN DNA damage-binding protein 1 OS=Bo...12191e-124     417     27     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
10Q3U1J4    1140   DDB1_MOUSE DNA damage-binding protein 1 OS=Mu...12191e-124     417     27     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IDA:MGI.
11Q9ESW0    1140   DDB1_RAT DNA damage-binding protein 1 OS=Ratt...12193e-124     416     27     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003684; F:damaged DNA binding; IMP:RGD.
GO:0006281; P:DNA repair; TAS:RGD.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
12Q805F9    1140   DDB1_CHICK DNA damage-binding protein 1 OS=Ga...12191e-121     409     27     48GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; TAS:Reactome.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
13O13807    1072   DDB1_SCHPO DNA damage-binding protein 1 OS=Sc...11654e-100     348     26     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0070912; C:Ddb1-Ckn1 complex; IDA:PomBase.::GO:0070913; C:Ddb1-Wdr21 complex; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0034644; P:cellular response to UV; IMP:PomBase.::GO:0006279; P:premeiotic DNA replication; TAS:PomBase.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IMP:PomBase.::GO:0006282; P:regulation of DNA repair; IMP:PomBase.::GO:0040020; P:regulation of meiosis; IGI:PomBase.::GO:0007090; P:regulation of S phase of mitotic cell cycle; IMP:PomBase.::GO:0006283; P:transcription-coupled nucleotide-excision repair; IMP:PomBase.
14Q9XYZ5    1140   DDB1_DROME DNA damage-binding protein 1 OS=Dr...12112e-97     341     26     46GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007307; P:eggshell chorion gene amplification; IDA:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0043161; P:proteasomal ubiquitin-dependent protein catabolic process; TAS:UniProtKB.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; ISS:UniProtKB.::GO:0035220; P:wing disc development; IMP:UniProtKB.
15B0M0P5    1181   DDB1_DICDI DNA damage-binding protein 1 OS=Di...12206e-95     334     25     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:dictyBase.
GO:0003684; F:damaged DNA binding; ISS:dictyBase.::GO:0005515; F:protein binding; IPI:dictyBase.
GO:0006289; P:nucleotide-excision repair; ISS:dictyBase.
16Q21554    1134   DDB1_CAEEL DNA damage-binding protein 1 OS=Ca...12278e-80     289     25     44GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0007276; P:gamete generation; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0030163; P:protein catabolic process; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
17Q4PGM6    1221   RSE1_USTMA Pre-mRNA-splicing factor RSE1 OS=U...8260.00000000003     72     19     38GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
18Q9UTT2    1206   RSE1_SCHPO Pre-mRNA-splicing factor prp12 OS=...7900.000000008     63.9     20     38GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase.
GO:0030620; F:U2 snRNA binding; ISS:PomBase.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.::GO:0000245; P:spliceosomal complex assembly; ISS:PomBase.
19Q15393    1217   SF3B3_HUMAN Splicing factor 3B subunit 3 OS=H...8170.0000003     58.9     20     36GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0030532; C:small nuclear ribonucleoprotein complex; TAS:ProtInc.::GO:0005689; C:U12-type spliceosomal complex; IDA:UniProtKB.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006461; P:protein complex assembly; TAS:ProtInc.
20A0JN52    1217   SF3B3_BOVIN Splicing factor 3B subunit 3 OS=B...8170.0000003     58.9     20     36
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
21Q921M3    1217   SF3B3_MOUSE Splicing factor 3B subunit 3 OS=M...8170.0000003     58.9     20     36
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
22Q2TZ19    1393   CFT1_ASPOR Protein cft1 OS=Aspergillus oryzae...4430.0000003     58.5     23     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
23Q10569    1444   CPSF1_BOVIN Cleavage and polyadenylation spec...4070.007     44.7     21     39GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
24P0CR22    1217   RSE1_CRYNJ Pre-mRNA-splicing factor RSE1 OS=A...7000.0000005     58.2     22     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
25P0CR23    1217   RSE1_CRYNB Pre-mRNA-splicing factor RSE1 OS=(...7000.0000005     58.2     22     39GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
26Q9EPU4    1441   CPSF1_MOUSE Cleavage and polyadenylation spec...4040.003     45.4     21     39GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
27Q5RBI5    1217   SF3B3_PONAB Splicing factor 3B subunit 3 OS=P...8170.0000005     57.8     20     36GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
28Q4WLI5    1225   RSE1_ASPFU Pre-mRNA-splicing factor rse1 OS=A...2110.0000006     57.8     24     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
29Q5BDG7    1339   CFT1_EMENI Protein cft1 OS=194 / M139) (Asper...4490.0000009     57.4     23     40GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
30Q10570    1443   CPSF1_HUMAN Cleavage and polyadenylation spec...4040.005     44.7     20     39GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006379; P:mRNA cleavage; IDA:UniProtKB.::GO:0006406; P:mRNA export from nucleus; TAS:Reactome.::GO:0006378; P:mRNA polyadenylation; IDA:UniProtKB.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
31Q1LVE8    1217   SF3B3_DANRE Splicing factor 3B subunit 3 OS=D...5490.000009     53.9     20     36GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003676; F:nucleic acid binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
records
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