Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR189W
Length:
1432
Number of sequences:
5887
Description:
YPR189W SKI3 SGDID:S000006393, Chr XVI from 912664-916962, Genome Release 64-1-1, Verified ORF, "Ski complex component and TPR protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
91Q8VBW8    186   TTC36_MOUSE Tetratricopeptide repeat protein ...874.8     34.3     28     45
GO:0005488; F:binding; IEA:InterPro.
92Q8IYB4    626   PEX5R_HUMAN PEX5-related protein OS=Homo sapi...934.9     35.4     25     49GO:0005829; C:cytosol; IBA:RefGenome.::GO:0005778; C:peroxisomal membrane; IBA:RefGenome.
GO:0005052; F:peroxisome matrix targeting signal-1 binding; IBA:RefGenome.
GO:0016558; P:protein import into peroxisome matrix; IBA:RefGenome.::GO:0043949; P:regulation of cAMP-mediated signaling; ISS:UniProtKB.
93P89105    1077   CTR9_YEAST RNA polymerase-associated protein ...1294.9     35.4     29     46GO:0016593; C:Cdc73/Paf1 complex; IPI:SGD.::GO:0035327; C:transcriptionally active chromatin; IDA:SGD.
GO:0000993; F:RNA polymerase II core binding; IPI:SGD.::GO:0001076; F:RNA polymerase II transcription factor binding transcription factor activity; IPI:SGD.::GO:0045142; F:triplex DNA binding; IDA:SGD.
GO:0031124; P:mRNA 3'-end processing; IMP:SGD.::GO:2001255; P:positive regulation of histone H3-K36 trimethylation; IMP:SGD.::GO:2001165; P:positive regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues; IMP:SGD.::GO:2001209; P:positive regulation of transcription elongation from RNA polymerase I promoter; IDA:SGD.::GO:0031938; P:regulation of chromatin silencing at telomere; IMP:SGD.::GO:2001173; P:regulation of histone H2B conserved C-terminal lysine ubiquitination; IDA:SGD.::GO:0051569; P:regulation of histone H3-K4 methylation; IMP:SGD.::GO:0034401; P:regulation of transcription by chromatin organization; IMP:SGD.::GO:0060260; P:regulation of transcription initiation from RNA polymerase II promoter; IMP:SGD.::GO:0000114; P:regulation of transcription involved in G1 phase of mitotic cell cycle; IMP:SGD.::GO:0031126; P:snoRNA 3'-end processing; IMP:SGD.::GO:0001015; P:snoRNA transcription from an RNA polymerase II promoter; IMP:SGD.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; IMP:SGD.
94Q6YZI0    927   SPY_ORYSJ Probable UDP-N-acetylglucosamine--p...935.1     35.4     25     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009740; P:gibberellic acid mediated signaling pathway; IEA:UniProtKB-KW.
95Q8BRH0    920   TMTC3_MOUSE Transmembrane and TPR repeat-cont...1235.4     35     28     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
96Q9SUR9    350   SGT1A_ARATH Protein SGT1 homolog A OS=Arabido...835.4     34.7     29     45GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0071365; P:cellular response to auxin stimulus; IMP:UniProtKB.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:2000072; P:regulation of defense response to fungus, incompatible interaction; IMP:UniProtKB.
97Q8ZLB8    1180   BCSC_SALTY Cellulose synthase operon protein ...2525.7     35     23     39GO:0019867; C:outer membrane; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.
GO:0030244; P:cellulose biosynthetic process; IEA:UniProtKB-KW.
98P16522    626   CDC23_YEAST Anaphase-promoting complex subuni...2106     35     23     40GO:0005680; C:anaphase-promoting complex; IDA:SGD.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.
GO:0030332; F:cyclin binding; IPI:SGD.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0016567; P:protein ubiquitination; IDA:SGD.::GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IEA:InterPro.
99O36033    817   YLM1_SCHPO TPR repeat-containing protein C19B...656     35     26     51GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0005488; F:binding; IEA:InterPro.
100Q54MD1    641   PEX5_DICDI Peroxisomal targeting signal 1 rec...696     35     26     52GO:0005829; C:cytosol; IBA:RefGenome.::GO:0005778; C:peroxisomal membrane; IBA:RefGenome.
GO:0005052; F:peroxisome matrix targeting signal-1 binding; IBA:RefGenome.
GO:0016558; P:protein import into peroxisome matrix; IBA:RefGenome.
101Q6ZXV5    915   TMTC3_HUMAN Transmembrane and TPR repeat-cont...976.3     35     20     55GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
102Q8IUR5    882   TMTC1_HUMAN Transmembrane and TPR repeat-cont...796.6     35     25     51GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
103O14607    1347   UTY_HUMAN Histone demethylase UTY OS=Homo sap...656.9     35     22     57GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
104Q9C6T2    606   PPR68_ARATH Pentatricopeptide repeat-containi...967     34.7     31     47
GO:0005488; F:binding; IEA:InterPro.
105O70546    1401   KDM6A_MOUSE Lysine-specific demethylase 6A OS...707.1     35     21     56GO:0035097; C:histone methyltransferase complex; IDA:MGI.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
106P41842    771   YO91_CAEEL TPR repeat-containing protein T20B...737.5     34.7     27     45
GO:0005488; F:binding; IEA:InterPro.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0048477; P:oogenesis; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
107O15550    1401   KDM6A_HUMAN Lysine-specific demethylase 6A OS...707.6     34.7     21     56
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0051568; P:histone H3-K4 methylation; ISS:UniProtKB.
108Q9EQ16    351   CXCR6_MOUSE C-X-C chemokine receptor type 6 O...598     34.3     27     54GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0016494; F:C-X-C chemokine receptor activity; IDA:MGI.
109Q9M8Y0    977   SEC_ARATH Probable UDP-N-acetylglucosamine--p...1578.6     34.7     21     41
GO:0005488; F:binding; IEA:InterPro.::GO:0016757; F:transferase activity, transferring glycosyl groups; IDA:TAIR.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006493; P:protein O-linked glycosylation; IDA:TAIR.
110Q20144    690   TMTC1_CAEEL Transmembrane and TPR repeat-cont...909.1     34.3     19     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
111Q3SZV0    188   TTC36_BOVIN Tetratricopeptide repeat protein ...959.2     33.5     24     45
GO:0005488; F:binding; IEA:InterPro.
112P79457    1212   UTY_MOUSE Histone demethylase UTY OS=Mus musc...689.5     34.7     22     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
records
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