Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR189W
Length:
1432
Number of sequences:
5887
Description:
YPR189W SKI3 SGDID:S000006393, Chr XVI from 912664-916962, Genome Release 64-1-1, Verified ORF, "Ski complex component and TPR protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61O34452    206   YRRB_BACSU TPR repeat-containing protein yrrB...1510.41     37.7     20     42
GO:0005488; F:binding; IEA:InterPro.
62A7Z061    825   CDC27_BOVIN Cell division cycle protein 27 ho...600.45     38.9     33     57GO:0005680; C:anaphase-promoting complex; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0070979; P:protein K11-linked ubiquitination; ISS:UniProtKB.
63A2A6Q5    825   CDC27_MOUSE Cell division cycle protein 27 ho...600.45     38.9     33     57GO:0005680; C:anaphase-promoting complex; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0070979; P:protein K11-linked ubiquitination; ISS:UniProtKB.
64Q7SGD2    695   CLF1_NEUCR Pre-mRNA-splicing factor clf-1 OS=...760.45     38.5     24     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
65P30260    824   CDC27_HUMAN Cell division cycle protein 27 ho...600.47     38.5     33     57GO:0005680; C:anaphase-promoting complex; IDA:UniProtKB.::GO:0005813; C:centrosome; IDA:MGI.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005876; C:spindle microtubule; IDA:MGI.
GO:0019903; F:protein phosphatase binding; IPI:BHF-UCL.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; TAS:Reactome.::GO:0008283; P:cell proliferation; TAS:ProtInc.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; TAS:Reactome.::GO:0007091; P:mitotic metaphase/anaphase transition; IMP:MGI.::GO:0051436; P:negative regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0051437; P:positive regulation of ubiquitin-protein ligase activity involved in mitotic cell cycle; TAS:Reactome.::GO:0070979; P:protein K11-linked ubiquitination; IDA:UniProtKB.
66Q4V8A2    824   CDC27_RAT Cell division cycle protein 27 homo...600.48     38.5     33     57GO:0005680; C:anaphase-promoting complex; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0070979; P:protein K11-linked ubiquitination; ISS:UniProtKB.
67P31759    593   FRZF_MYXXA Protein methyltransferase FrzF OS=...780.51     38.5     29     47
GO:0005488; F:binding; IEA:InterPro.::GO:0008983; F:protein-glutamate O-methyltransferase activity; IEA:EC.
GO:0006935; P:chemotaxis; IEA:UniProtKB-KW.
68Q7K4B6    926   TMTC3_DROME Transmembrane and TPR repeat-cont...1280.52     38.5     24     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005488; F:binding; IEA:InterPro.
69O67178    761   Y1088_AQUAE Uncharacterized protein aq_1088 O...1180.63     38.1     22     50
GO:0005488; F:binding; IEA:InterPro.::GO:0008146; F:sulfotransferase activity; IEA:InterPro.
70Q66H45    186   TTC36_RAT Tetratricopeptide repeat protein 36...1020.66     37     28     44
GO:0005488; F:binding; IEA:InterPro.
71Q04737    248   Y751_SYNY3 TPR repeat-containing protein slr0...820.79     37     22     50
GO:0005488; F:binding; IEA:InterPro.
72Q9FMA3    728   PEX5_ARATH Peroxisome biogenesis protein 5 OS...1381     37.4     22     45GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.
GO:0006625; P:protein targeting to peroxisome; IGI:TAIR.::GO:0009733; P:response to auxin stimulus; IMP:TAIR.
73Q58823    567   Y1428_METJA TPR repeat-containing protein MJ1...881     37.4     22     50
GO:0005488; F:binding; IEA:InterPro.
74O82039    932   SPY_PETHY Probable UDP-N-acetylglucosamine--p...651.1     37.7     28     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009740; P:gibberellic acid mediated signaling pathway; IEA:UniProtKB-KW.
75Q9CZW5    611   TOM70_MOUSE Mitochondrial import receptor sub...1011.2     37.4     28     48GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
76Q04364    514   YMP8_YEAST TPR repeat-containing protein YMR0...921.2     37.4     25     48GO:0005829; C:cytosol; IBA:RefGenome.::GO:0005778; C:peroxisomal membrane; IBA:RefGenome.
GO:0005052; F:peroxisome matrix targeting signal-1 binding; IBA:RefGenome.
GO:0016558; P:protein import into peroxisome matrix; IBA:RefGenome.
77Q8LP10    918   SPY_EUSER Probable UDP-N-acetylglucosamine--p...891.2     37.4     22     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009740; P:gibberellic acid mediated signaling pathway; IEA:UniProtKB-KW.
78Q8RVB2    931   SPY_SOLLC Probable UDP-N-acetylglucosamine--p...651.3     37.4     28     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009740; P:gibberellic acid mediated signaling pathway; IEA:UniProtKB-KW.
79Q75Q39    610   TOM70_RAT Mitochondrial import receptor subun...1011.5     37     28     48GO:0016021; C:integral to membrane; TAS:RGD.::GO:0005741; C:mitochondrial outer membrane; TAS:RGD.
GO:0005488; F:binding; IEA:InterPro.
GO:0015031; P:protein transport; TAS:RGD.
80P19737    387   Y425_SYNP2 TPR repeat-containing protein SYNP...771.7     36.6     30     48
GO:0005488; F:binding; IEA:InterPro.
81O82422    944   SPY_HORVU Probable UDP-N-acetylglucosamine--p...771.8     36.6     23     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:UniProtKB-KW.
GO:0009740; P:gibberellic acid mediated signaling pathway; IEA:UniProtKB-KW.
82Q58741    314   Y1345_METJA TPR repeat-containing protein MJ1...1191.9     36.2     23     44
GO:0005488; F:binding; IEA:InterPro.
83Q86B11    592   CDC23_DICDI Anaphase-promoting complex subuni...681.9     36.6     25     50GO:0005680; C:anaphase-promoting complex; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IEA:InterPro.
84Q57711    338   Y941_METJA TPR repeat-containing protein MJ09...582.1     36.2     28     53
GO:0005488; F:binding; IEA:InterPro.
85P38042    758   CDC27_YEAST Anaphase-promoting complex subuni...852.3     36.2     27     49GO:0005680; C:anaphase-promoting complex; IDA:SGD.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0031145; P:anaphase-promoting complex-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0016567; P:protein ubiquitination; IDA:SGD.
86P42460    403   Y270_SYNE7 TPR repeat-containing protein Synp...442.4     36.2     39     59
GO:0005488; F:binding; IEA:InterPro.
87O77033    1390   CYC8_DICDI General transcriptional corepresso...663.5     35.8     24     53GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
88O23052    808   Y1515_ARATH Uncharacterized TPR repeat-contai...1073.6     35.8     24     46GO:0005886; C:plasma membrane; IDA:TAIR.::GO:0009506; C:plasmodesma; IDA:TAIR.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
89Q6YQX2    715   PNP_ONYPE Polyribonucleotide nucleotidyltrans...1144.3     35.4     28     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000175; F:3'-5'-exoribonuclease activity; IEA:InterPro.::GO:0004654; F:polyribonucleotide nucleotidyltransferase activity; IEA:EC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006402; P:mRNA catabolic process; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
90Q58350    318   Y940_METJA TPR repeat-containing protein MJ09...674.8     35     28     51
GO:0005488; F:binding; IEA:InterPro.
91Q8VBW8    186   TTC36_MOUSE Tetratricopeptide repeat protein ...874.8     34.3     28     45
GO:0005488; F:binding; IEA:InterPro.
records
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