Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR189W
Length:
1432
Number of sequences:
5887
Description:
YPR189W SKI3 SGDID:S000006393, Chr XVI from 912664-916962, Genome Release 64-1-1, Verified ORF, "Ski complex component and TPR protein, mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P17883    1432   SKI3_YEAST Superkiller protein 3 OS=Saccharom...14320     2937     100     100GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0055087; C:Ski complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0070478; P:nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay; IMP:SGD.::GO:0070481; P:nuclear-transcribed mRNA catabolic process, non-stop decay; IMP:SGD.::GO:0009615; P:response to virus; IEA:UniProtKB-KW.
2O94474    1389   SKI3_SCHPO Superkiller protein 3 OS=Schizosac...14601e-118     410     25     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0055087; C:Ski complex; ISS:PomBase.
GO:0005488; F:binding; IEA:InterPro.
GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:2000766; P:negative regulation of cytoplasmic translation; ISS:PomBase.
3Q6FM42    590   PEX5_CANGA Peroxisomal targeting signal recep...1410.0000001     60.1     30     49GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
4Q6DFB8    1564   TTC37_XENLA Tetratricopeptide repeat protein ...1390.0000005     58.5     30     54GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
5P35056    612   PEX5_YEAST Peroxisomal targeting signal recep...870.0000005     57.8     34     57GO:0005829; C:cytosol; IDA:SGD.::GO:0005778; C:peroxisomal membrane; IDA:SGD.
GO:0005052; F:peroxisome matrix targeting signal-1 binding; IDA:SGD.
GO:0016560; P:protein import into peroxisome matrix, docking; IMP:SGD.
6Q6PGP7    1564   TTC37_HUMAN Tetratricopeptide repeat protein ...890.000004     55.5     35     58GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0055087; C:Ski complex; IDA:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; IDA:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
7Q6CT48    566   PEX5_KLULA Peroxisomal targeting signal recep...860.000005     54.7     35     56GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
8Q01495    569   PEX5_PICAN Peroxisomal targeting signal recep...860.00002     52.8     28     57GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
9Q9VGU5    872   TTC14_DROME Tetratricopeptide repeat protein ...1110.00005     51.6     32     50
GO:0005488; F:binding; IEA:InterPro.
10Q752X0    569   PEX5_ASHGO Peroxisomal targeting signal recep...860.0001     50.4     33     57GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
11P33292    576   PEX5_PICPA Peroxisomal targeting signal recep...1250.0002     49.7     27     50GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
12P38825    639   TOM71_YEAST Protein TOM71 OS=Saccharomyces ce...3680.0003     48.9     21     41GO:0031307; C:integral to mitochondrial outer membrane; IDA:SGD.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IDA:SGD.
13O74711    592   PEX5_CANAL Peroxisomal targeting signal recep...860.0004     48.5     29     55GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0006635; P:fatty acid beta-oxidation; IMP:CGD.::GO:0016558; P:protein import into peroxisome matrix; IMP:CGD.
14P58938    1508   BCSC_XANAC Cellulose synthase operon protein ...2210.0005     48.5     24     43GO:0019867; C:outer membrane; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.
GO:0030244; P:cellulose biosynthetic process; IEA:UniProtKB-KW.::GO:0006011; P:UDP-glucose metabolic process; IEA:InterPro.
15Q99144    598   PEX5_YARLI Peroxisomal targeting signal recep...860.001     47.4     31     51GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
16Q6BM14    603   PEX5_DEBHA Peroxisomal targeting signal recep...860.002     46.2     27     55GO:0005778; C:peroxisomal membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0015031; P:protein transport; IEA:UniProtKB-KW.
17Q8TAM2    541   TTC8_HUMAN Tetratricopeptide repeat protein 8...2400.004     45.4     24     40GO:0034464; C:BBSome; IDA:BHF-UCL.::GO:0005813; C:centrosome; IDA:BHF-UCL.::GO:0060170; C:cilium membrane; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IDA:BHF-UCL.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0042384; P:cilium assembly; TAS:BHF-UCL.::GO:0048560; P:establishment of anatomical structure orientation; IMP:BHF-UCL.::GO:0050893; P:sensory processing; TAS:BHF-UCL.
18Q8VD72    515   TTC8_MOUSE Tetratricopeptide repeat protein 8...2380.006     44.7     24     39GO:0034464; C:BBSome; IDA:MGI.::GO:0005814; C:centriole; IEA:UniProtKB-SubCell.::GO:0060170; C:cilium membrane; IEA:UniProtKB-SubCell.::GO:0032391; C:photoreceptor connecting cilium; IDA:BHF-UCL.
GO:0005488; F:binding; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0045444; P:fat cell differentiation; IEP:BHF-UCL.
19Q5F3K0    844   TTC27_CHICK Tetratricopeptide repeat protein ...670.007     44.7     30     52
GO:0005488; F:binding; IEA:InterPro.
20B3DNN5    543   CDC16_ARATH Anaphase-promoting complex subuni...850.008     44.3     26     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010087; P:phloem or xylem histogenesis; IMP:TAIR.::GO:0032875; P:regulation of DNA endoreduplication; IMP:TAIR.
21Q17QZ7    847   TTC27_BOVIN Tetratricopeptide repeat protein ...670.009     44.3     30     51
GO:0005488; F:binding; IEA:InterPro.
22Q54DA8    564   STIP1_DICDI Protein STIP1 homolog OS=Dictyost...1680.009     43.9     26     45GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
GO:0030544; F:Hsp70 protein binding; ISS:dictyBase.
GO:0006457; P:protein folding; ISS:dictyBase.
23Q06AN9    717   CD27A_ARATH Cell division cycle protein 27 ho...1990.025     42.7     22     44GO:0005680; C:anaphase-promoting complex; IPI:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007276; P:gamete generation; IGI:TAIR.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0051302; P:regulation of cell division; IGI:TAIR.::GO:0051510; P:regulation of unidimensional cell growth; IGI:TAIR.
24Q5RBW9    843   TTC27_PONAB Tetratricopeptide repeat protein ...670.027     42.7     28     51
GO:0005488; F:binding; IEA:InterPro.
25Q6P3X3    843   TTC27_HUMAN Tetratricopeptide repeat protein ...670.027     42.7     28     51
GO:0005488; F:binding; IEA:InterPro.
26Q8NBP0    860   TTC13_HUMAN Tetratricopeptide repeat protein ...1090.03     42.7     28     46
GO:0005488; F:binding; IEA:InterPro.
27Q9STS3    579   CDC23_ARATH Anaphase-promoting complex subuni...620.031     42.4     29     56GO:0005680; C:anaphase-promoting complex; IEA:InterPro.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0031347; P:regulation of defense response; IMP:TAIR.::GO:0030071; P:regulation of mitotic metaphase/anaphase transition; IEA:InterPro.
28Q5ZMQ9    645   PEX5_CHICK Peroxisomal targeting signal 1 rec...710.033     42.4     28     56GO:0005829; C:cytosol; IBA:RefGenome.::GO:0005778; C:peroxisomal membrane; IBA:RefGenome.
GO:0005052; F:peroxisome matrix targeting signal-1 binding; IBA:RefGenome.
GO:0016558; P:protein import into peroxisome matrix; IBA:RefGenome.
29Q6B4Z3    1079   UTY_PANTR Histone demethylase UTY OS=Pan trog...1310.033     42.4     21     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0016702; F:oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen; IEA:UniProtKB-KW.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
30P44942    384   NRFF_HAEIN Formate-dependent nitrite reductas...830.041     41.6     28     53GO:0042597; C:periplasmic space; IEA:UniProtKB-SubCell.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
31Q8X5M0    1154   BCSC_ECO57 Putative cellulose synthase operon...1240.051     42     27     44GO:0019867; C:outer membrane; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.
GO:0030244; P:cellulose biosynthetic process; IEA:UniProtKB-KW.
records
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