Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR187W
Length:
155
Number of sequences:
5887
Description:
YPR187W RPO26 SGDID:S000006391, Chr XVI from 911257-911276,911353-911800, Genome Release 64-1-1, Verified ORF, "RNA polymerase subunit ABC23, common to RNA polymerases I, II, and III; part of central core; similar to bacterial omega subunit"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P20435    155   RPAB2_YEAST DNA-directed RNA polymerases I, I...1555e-111     319     100     100GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005736; C:DNA-directed RNA polymerase I complex; IDA:SGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:SGD.::GO:0005666; C:DNA-directed RNA polymerase III complex; IDA:SGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0006366; P:transcription from RNA polymerase II promoter; IMP:SGD.::GO:0042797; P:tRNA transcription from RNA polymerase III promoter; IDA:SGD.
2P36595    142   RPAB2_SCHPO DNA-directed RNA polymerases I, I...1553e-46     153     57     67GO:0005829; C:cytosol; IDA:PomBase.::GO:0005736; C:DNA-directed RNA polymerase I complex; IGI:PomBase.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; IGI:PomBase.::GO:0005666; C:DNA-directed RNA polymerase III complex; IGI:PomBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006354; P:transcription elongation, DNA-dependent; TAS:PomBase.::GO:0006360; P:transcription from RNA polymerase I promoter; IC:PomBase.::GO:0006366; P:transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006383; P:transcription from RNA polymerase III promoter; IC:PomBase.
3Q24320    131   RPAB2_DROME DNA-directed RNA polymerases I, I...803e-38     132     73     91GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:FlyBase.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; ISS:FlyBase.
GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:FlyBase.
4O88828    127   RPAB2_RAT DNA-directed RNA polymerases I, II,...766e-38     132     78     91GO:0005736; C:DNA-directed RNA polymerase I complex; TAS:RGD.::GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.::GO:0005666; C:DNA-directed RNA polymerase III complex; TAS:RGD.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; TAS:RGD.
GO:0006360; P:transcription from RNA polymerase I promoter; TAS:RGD.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0006383; P:transcription from RNA polymerase III promoter; TAS:RGD.
5P61219    127   RPAB2_MOUSE DNA-directed RNA polymerases I, I...766e-38     132     78     91GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IDA:MGI.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
6Q5R592    127   RPAB2_PONAB DNA-directed RNA polymerases I, I...767e-38     131     78     91GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
7P61218    127   RPAB2_HUMAN DNA-directed RNA polymerases I, I...767e-38     131     78     91GO:0005665; C:DNA-directed RNA polymerase II, core complex; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006386; P:termination of RNA polymerase III transcription; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006385; P:transcription elongation from RNA polymerase III promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
8P61217    127   RPAB2_CRIGR DNA-directed RNA polymerases I, I...767e-38     131     78     91GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
9Q32PE0    127   RPAB2_BOVIN DNA-directed RNA polymerases I, I...768e-38     131     78     91GO:0005665; C:DNA-directed RNA polymerase II, core complex; ISS:UniProtKB.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0006468; P:protein phosphorylation; ISS:GOC.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB.
10A8WSV7    138   RPAB2_CAEBR Probable DNA-directed RNA polymer...803e-36     127     69     86GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0032502; P:developmental process; ISS:UniProtKB.::GO:0000003; P:reproduction; ISS:UniProtKB.
11Q54FA8    133   RPAB2_DICDI DNA-directed RNA polymerases I, I...802e-35     125     73     86GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
12Q17684    137   RPAB2_CAEEL Probable DNA-directed RNA polymer...803e-35     125     68     86GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.::GO:0000003; P:reproduction; IMP:UniProtKB.
13Q9YDJ9    89   RPOK_AERPE DNA-directed RNA polymerase subuni...720.00000000000003     68.9     49     64GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
14A1RWX0    81   RPOK_THEPD DNA-directed RNA polymerase subuni...700.0000000000002     66.2     43     71GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
15Q5UQ32    396   RPO6_MIMIV DNA-directed RNA polymerase subuni...810.0000000000004     69.3     43     60GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
16Q8TT40    60   RPOK_METAC DNA-directed RNA polymerase subuni...510.000000000003     62.8     55     76GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
17Q8PW42    83   RPOK_METMA DNA-directed RNA polymerase subuni...510.00000000001     61.6     53     76GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
18Q8ZTF9    106   RPOK_PYRAE DNA-directed RNA polymerase subuni...720.00000000002     61.2     44     64GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
19A2SSV2    62   RPOK_METLZ DNA-directed RNA polymerase subuni...510.0000000007     56.2     53     73GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
20O26148    61   RPOK_METTH DNA-directed RNA polymerase subuni...520.000000001     55.5     52     75GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
21Q9HJ14    61   RPOK_THEAC DNA-directed RNA polymerase subuni...520.000000002     54.7     50     71GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
22O29134    75   RPOK_ARCFU DNA-directed RNA polymerase subuni...510.000000003     54.3     49     76GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
23P58232    61   RPOK_THEVO DNA-directed RNA polymerase subuni...520.000000005     53.9     50     69GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
24Q97ZJ9    95   RPOK_SULSO DNA-directed RNA polymerase subuni...590.000000008     53.9     42     64GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
25Q9HQJ0    60   RPOK_HALSA DNA-directed RNA polymerase subuni...530.00000001     52.4     43     70GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
26B0R4Y7    60   RPOK_HALS3 DNA-directed RNA polymerase subuni...530.00000001     52.4     43     70GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
27C3MUV8    95   RPOK_SULIM DNA-directed RNA polymerase subuni...590.00000001     53.1     42     64GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
28C4KH38    95   RPOK_SULIK DNA-directed RNA polymerase subuni...590.00000001     53.1     42     64GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
29C3N5H2    95   RPOK_SULIA DNA-directed RNA polymerase subuni...590.00000001     53.1     42     64GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
30Q8U0E8    57   RPOK_PYRFU DNA-directed RNA polymerase subuni...510.00000001     52.4     47     67GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
31B9LPW5    59   RPOK_HALLT DNA-directed RNA polymerase subuni...500.00000002     51.6     46     70GO:0030880; C:RNA polymerase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003899; F:DNA-directed RNA polymerase activity; IEA:UniProtKB-KW.
records
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