Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR179C
Length:
655
Number of sequences:
5887
Description:
YPR179C HDA3 SGDID:S000006383, Chr XVI from 895764-893797, Genome Release 64-1-1, reverse complement, Verified ORF, "Subunit of a possibly tetrameric trichostatin A-sensitive class II histone deacetylase complex that contains an Hda1p homodimer and an Hda2p-Hda3p heterodimer; required for the activity of the complex; has similarity to Hda2p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q06623    655   HDA3_YEAST HDA1 complex subunit 3 OS=Saccharo...6550     1350     100     100GO:0070823; C:HDA1 complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003677; F:DNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0007059; P:chromosome segregation; IMP:SGD.::GO:0031047; P:gene silencing by RNA; IMP:SGD.::GO:0010978; P:gene silencing involved in chronological cell aging; IMP:SGD.::GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
2Q758V8    637   HDA3_ASHGO HDA1 complex subunit 3 OS=Y-1056) ...6530     610     49     66GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3Q06629    674   HDA2_YEAST HDA1 complex subunit 2 OS=Saccharo...1640.0000000001     68.2     30     46GO:0070823; C:HDA1 complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003677; F:DNA binding; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0031047; P:gene silencing by RNA; IMP:SGD.::GO:0010978; P:gene silencing involved in chronological cell aging; IMP:SGD.::GO:0016575; P:histone deacetylation; IDA:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q75EZ7    665   HDA2_ASHGO HDA1 complex subunit 2 OS=Y-1056) ...1620.00000004     60.1     28     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5P41877    1009   ISW1_CAEEL Chromatin-remodeling complex ATPas...1790.008     43.1     27     41GO:0016585; C:chromatin remodeling complex; IEA:InterPro.::GO:0000790; C:nuclear chromatin; IDA:WormBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0031491; F:nucleosome binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; IEA:InterPro.::GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:WormBase.::GO:0002009; P:morphogenesis of an epithelium; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016246; P:RNA interference; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q5RF15    618   TNI3K_PONAB Serine/threonine-protein kinase T...1380.095     39.7     26     47GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
7O60264    1052   SMCA5_HUMAN SWI/SNF-related matrix-associated...950.12     39.3     31     43GO:0000793; C:condensed chromosome; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0016589; C:NURF complex; IDA:UniProtKB.::GO:0031213; C:RSF complex; IPI:UniProtKB.
GO:0005524; F:ATP binding; IDA:UniProtKB.::GO:0016887; F:ATPase activity; IDA:UniProtKB.::GO:0003677; F:DNA binding; IDA:UniProtKB.::GO:0004386; F:helicase activity; TAS:ProtInc.::GO:0031491; F:nucleosome binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0034080; P:CenH3-containing nucleosome assembly at centromere; TAS:Reactome.::GO:0016584; P:nucleosome positioning; IDA:UniProtKB.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; TAS:ProtInc.::GO:0006352; P:transcription initiation, DNA-dependent; IDA:UniProtKB.
8Q59H18    835   TNI3K_HUMAN Serine/threonine-protein kinase T...1380.13     39.3     26     47GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0008022; F:protein C-terminus binding; IPI:UniProtKB.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.::GO:0031013; F:troponin I binding; IPI:UniProtKB.
9Q91ZW3    1051   SMCA5_MOUSE SWI/SNF-related matrix-associated...950.13     39.3     31     43GO:0005677; C:chromatin silencing complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0031491; F:nucleosome binding; IEA:InterPro.
GO:0000183; P:chromatin silencing at rDNA; IDA:UniProtKB.::GO:0006302; P:double-strand break repair; IMP:BHF-UCL.::GO:0009790; P:embryo development; IMP:MGI.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:MGI.
10Q6URW6    2000   MYH14_MOUSE Myosin-14 OS=Mus musculus (Mouse)...2030.14     39.3     21     45GO:0030424; C:axon; IDA:MGI.::GO:0005737; C:cytoplasm; IDA:MGI.::GO:0030426; C:growth cone; IDA:MGI.::GO:0016459; C:myosin complex; IDA:MGI.::GO:0001725; C:stress fiber; IDA:MGI.
GO:0051015; F:actin filament binding; IDA:MGI.::GO:0030898; F:actin-dependent ATPase activity; IDA:MGI.::GO:0005524; F:ATP binding; IDA:MGI.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0000146; F:microfilament motor activity; IDA:MGI.
GO:0030048; P:actin filament-based movement; IDA:MGI.::GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
11Q24368    1027   ISWI_DROME Chromatin-remodeling complex ATPas...780.19     38.9     33     46GO:0016590; C:ACF complex; IDA:FlyBase.::GO:0008623; C:chromatin accessibility complex; IDA:FlyBase.::GO:0016589; C:NURF complex; IDA:FlyBase.::GO:0005700; C:polytene chromosome; IDA:FlyBase.::GO:0031213; C:RSF complex; IPI:FlyBase.::GO:0005667; C:transcription factor complex; IPI:FlyBase.
GO:0005524; F:ATP binding; ISS:FlyBase.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0003678; F:DNA helicase activity; TAS:FlyBase.::GO:0008094; F:DNA-dependent ATPase activity; IDA:FlyBase.::GO:0031491; F:nucleosome binding; IEA:InterPro.::GO:0070615; F:nucleosome-dependent ATPase activity; IDA:FlyBase.::GO:0008134; F:transcription factor binding; IPI:FlyBase.
GO:0043044; P:ATP-dependent chromatin remodeling; IEA:InterPro.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0035076; P:ecdysone receptor-mediated signaling pathway; IGI:FlyBase.::GO:0007517; P:muscle organ development; IMP:FlyBase.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:FlyBase.::GO:0035063; P:nuclear speck organization; IMP:FlyBase.::GO:0006334; P:nucleosome assembly; IDA:FlyBase.::GO:0042766; P:nucleosome mobilization; IDA:FlyBase.::GO:0016584; P:nucleosome positioning; IDA:FlyBase.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:FlyBase.::GO:0042752; P:regulation of circadian rhythm; IMP:FlyBase.::GO:0006351; P:transcription, DNA-dependent; IDA:FlyBase.
12P28370    1054   SMCA1_HUMAN Probable global transcription act...1920.19     38.9     24     40GO:0016589; C:NURF complex; IDA:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; TAS:ProtInc.::GO:0031491; F:nucleosome binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:HGNC.
GO:0043044; P:ATP-dependent chromatin remodeling; IEA:InterPro.::GO:0007420; P:brain development; IMP:HGNC.::GO:0030182; P:neuron differentiation; ISS:HGNC.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IMP:HGNC.::GO:0006351; P:transcription, DNA-dependent; IMP:HGNC.
13Q6PGB8    1046   SMCA1_MOUSE Probable global transcription act...1870.22     38.5     24     42
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0031491; F:nucleosome binding; IEA:InterPro.
GO:0043044; P:ATP-dependent chromatin remodeling; IEA:InterPro.::GO:0007420; P:brain development; ISS:HGNC.::GO:0030182; P:neuron differentiation; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; ISS:HGNC.::GO:0006351; P:transcription, DNA-dependent; ISS:HGNC.
14Q5GIG6    834   TNI3K_MOUSE Serine/threonine-protein kinase T...1380.23     38.5     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
15Q7TQP6    835   TNI3K_RAT Serine/threonine-protein kinase TNN...1380.3     38.1     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0004674; F:protein serine/threonine kinase activity; IEA:UniProtKB-KW.
16Q7ZU90    1026   CHD1L_DANRE Chromodomain-helicase-DNA-binding...1880.35     37.7     26     45GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0016887; F:ATPase activity; ISS:UniProtKB.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.
GO:0006338; P:chromatin remodeling; ISS:UniProtKB.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
17Q9VT70    317   NDE1_DROME Nuclear distribution protein nudE ...1600.57     36.6     25     50GO:0000776; C:kinetochore; IDA:FlyBase.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005635; C:nuclear envelope; IDA:FlyBase.::GO:0070732; C:spindle envelope; IDA:FlyBase.::GO:0031616; C:spindle pole centrosome; ISS:UniProtKB.
GO:0008017; F:microtubule binding; ISS:UniProtKB.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0051298; P:centrosome duplication; ISS:UniProtKB.::GO:0051642; P:centrosome localization; IMP:FlyBase.::GO:0007060; P:male meiosis chromosome segregation; IMP:FlyBase.::GO:0007080; P:mitotic metaphase plate congression; IMP:FlyBase.::GO:0007052; P:mitotic spindle organization; IMP:FlyBase.
18P22082    1703   SNF2_YEAST Transcription regulatory protein S...2140.96     36.6     21     42GO:0016514; C:SWI/SNF complex; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008094; F:DNA-dependent ATPase activity; IDA:SGD.::GO:0004386; F:helicase activity; IEA:UniProtKB-KW.::GO:0070577; F:histone acetyl-lysine binding; IDA:SGD.::GO:0031492; F:nucleosomal DNA binding; IDA:SGD.
GO:0043044; P:ATP-dependent chromatin remodeling; IDA:SGD.::GO:0044109; P:cellular alcohol catabolic process; IMP:SGD.::GO:0006261; P:DNA-dependent DNA replication; IMP:SGD.::GO:0006302; P:double-strand break repair; IMP:SGD.::GO:0042766; P:nucleosome mobilization; IDA:SGD.::GO:0031496; P:positive regulation of mating type switching; IMP:SGD.::GO:0061412; P:positive regulation of transcription from RNA polymerase II promoter in response to amino acid starvation; IMP:SGD.::GO:0042148; P:strand invasion; IMP:SGD.::GO:0005987; P:sucrose catabolic process; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q7U6T1    857   SYL_SYNPX Leucine--tRNA ligase OS=Synechococc...1321.3     35.8     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004823; F:leucine-tRNA ligase activity; IEA:EC.
GO:0006429; P:leucyl-tRNA aminoacylation; IEA:InterPro.
20Q7Z406    1995   MYH14_HUMAN Myosin-14 OS=Homo sapiens (Human)...2031.4     36.2     22     45GO:0016459; C:myosin complex; IEA:UniProtKB-KW.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003774; F:motor activity; IEA:InterPro.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0008360; P:regulation of cell shape; IEA:UniProtKB-KW.
21Q8CJ40    2009   CROCC_MOUSE Rootletin OS=Mus musculus (Mouse)...2181.6     35.8     19     43GO:0005814; C:centriole; IDA:UniProtKB.::GO:0035253; C:ciliary rootlet; IDA:MGI.
GO:0019894; F:kinesin binding; IPI:MGI.::GO:0005198; F:structural molecule activity; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0051297; P:centrosome organization; ISS:UniProtKB.
22Q5E7G5    859   SYA_VIBF1 Alanine--tRNA ligase OS=Vibrio fisc...931.7     35.4     26     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
23B2ULZ0    414   NUOD_AKKM8 NADH-quinone oxidoreductase subuni...681.8     35     35     50GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0051287; F:NAD binding; IEA:InterPro.::GO:0050136; F:NADH dehydrogenase (quinone) activity; IEA:EC.::GO:0048038; F:quinone binding; IEA:UniProtKB-KW.
GO:0006810; P:transport; IEA:UniProtKB-KW.
24Q6F8M7    379   CARA_ACIAD Carbamoyl-phosphate synthase small...482.1     35     40     60
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:EC.
GO:0006526; P:arginine biosynthetic process; IEA:UniProtKB-KW.::GO:0070409; P:carbamoyl phosphate biosynthetic process; IEA:InterPro.::GO:0006543; P:glutamine catabolic process; IEA:InterPro.::GO:0006221; P:pyrimidine nucleotide biosynthetic process; IEA:UniProtKB-KW.
25A5EW88    873   SYA_DICNV Alanine--tRNA ligase OS=Dichelobact...732.6     35     29     62GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0004813; F:alanine-tRNA ligase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
GO:0006419; P:alanyl-tRNA aminoacylation; IEA:InterPro.
26Q9JVZ6    377   CARA_NEIMA Carbamoyl-phosphate synthase small...482.9     34.7     40     60
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:EC.
GO:0006526; P:arginine biosynthetic process; IEA:UniProtKB-KW.::GO:0070409; P:carbamoyl phosphate biosynthetic process; IEA:InterPro.::GO:0006543; P:glutamine catabolic process; IEA:InterPro.::GO:0006221; P:pyrimidine nucleotide biosynthetic process; IEA:UniProtKB-KW.
27Q9JXX4    377   CARA_NEIMB Carbamoyl-phosphate synthase small...482.9     34.7     40     60
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:EC.
GO:0006526; P:arginine biosynthetic process; IEA:UniProtKB-KW.::GO:0070409; P:carbamoyl phosphate biosynthetic process; IEA:InterPro.::GO:0006543; P:glutamine catabolic process; IEA:InterPro.::GO:0006221; P:pyrimidine nucleotide biosynthetic process; IEA:UniProtKB-KW.
28Q9H251    3354   CAD23_HUMAN Cadherin-23 OS=Homo sapiens (Huma...763.4     34.7     32     50GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0032420; C:stereocilium; ISS:HGNC.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:HGNC.
GO:0006816; P:calcium ion transport; IMP:DFLAT.::GO:0016339; P:calcium-dependent cell-cell adhesion; NAS:UniProtKB.::GO:0051480; P:cytosolic calcium ion homeostasis; IMP:DFLAT.::GO:0050957; P:equilibrioception; IMP:HGNC.::GO:0007156; P:homophilic cell adhesion; IEA:InterPro.::GO:0045494; P:photoreceptor cell maintenance; IMP:HGNC.::GO:0050896; P:response to stimulus; IEA:UniProtKB-KW.::GO:0007605; P:sensory perception of sound; IMP:MGI.
29Q7UGJ6    389   CARA_RHOBA Carbamoyl-phosphate synthase small...513.7     34.3     35     59
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004088; F:carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity; IEA:EC.
GO:0006526; P:arginine biosynthetic process; IEA:UniProtKB-KW.::GO:0070409; P:carbamoyl phosphate biosynthetic process; IEA:InterPro.::GO:0006543; P:glutamine catabolic process; IEA:InterPro.::GO:0006221; P:pyrimidine nucleotide biosynthetic process; IEA:UniProtKB-KW.
30Q1KXR1    1705   YCF1_HELAN Putative membrane protein ycf1 OS=...823.8     34.7     26     54GO:0031969; C:chloroplast membrane; IEA:UniProtKB-SubCell.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
31Q5TZA2    2017   CROCC_HUMAN Rootletin OS=Homo sapiens (Human)...1354.1     34.3     21     51GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0005814; C:centriole; ISS:UniProtKB.::GO:0035253; C:ciliary rootlet; ISS:UniProtKB.::GO:0005886; C:plasma membrane; IDA:HPA.
GO:0019894; F:kinesin binding; ISS:UniProtKB.::GO:0005198; F:structural molecule activity; ISS:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0051297; P:centrosome organization; IDA:UniProtKB.::GO:0008104; P:protein localization; IMP:UniProtKB.
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