Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR178W
Length:
465
Number of sequences:
5887
Description:
YPR178W PRP4 SGDID:S000006382, Chr XVI from 892332-893729, Genome Release 64-1-1, Verified ORF, "Splicing factor, component of the U4/U6-U5 snRNP complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
991P90916    417   LIN53_CAEEL Probable histone-binding protein ...1178.7     32.3     23     44GO:0070176; C:DRM complex; IDA:UniProtKB.
GO:0042826; F:histone deacetylase binding; IPI:UniProtKB.
GO:0001708; P:cell fate specification; IMP:WormBase.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:UniProtKB.::GO:0048557; P:embryonic digestive tract morphogenesis; IGI:WormBase.::GO:0040035; P:hermaphrodite genitalia development; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; NAS:UniProtKB.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0045138; P:tail tip morphogenesis; IMP:WormBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
992O43379    1518   WDR62_HUMAN WD repeat-containing protein 62 O...748.7     32.7     27     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0000922; C:spindle pole; IDA:UniProtKB.
GO:0021987; P:cerebral cortex development; IMP:UniProtKB.::GO:0022008; P:neurogenesis; IMP:UniProtKB.
993Q58D20    485   NLE1_BOVIN Notchless protein homolog 1 OS=Bos...349     32.3     35     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
994Q8SRK1    384   HAT2_ENCCU Histone acetyltransferase type B s...1309.1     32.3     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.
995Q8VEJ4    485   NLE1_MOUSE Notchless protein homolog 1 OS=Mus...349.4     32.3     35     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0001826; P:inner cell mass cell differentiation; IMP:MGI.::GO:0007219; P:Notch signaling pathway; IDA:MGI.
996P36037    715   DOA1_YEAST Protein DOA1 OS=Saccharomyces cere...1059.4     32.3     24     48GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006303; P:double-strand break repair via nonhomologous end joining; IMP:SGD.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IMP:SGD.
997Q5RFF8    485   NLE1_PONAB Notchless protein homolog 1 OS=Pon...349.5     32.3     35     62GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
998B4JB43    326   EIF3I_DROGR Eukaryotic translation initiation...1879.6     32.3     22     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
999Q04491    297   SEC13_YEAST Protein transport protein SEC13 O...1049.7     32     20     44GO:0030127; C:COPII vesicle coat; IDA:SGD.::GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0031080; C:Nup107-160 complex; IDA:SGD.::GO:0035859; C:Seh1-associated complex; IDA:SGD.
GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0005198; F:structural molecule activity; IDA:SGD.
GO:0090114; P:COPII-coated vesicle budding; IDA:SGD.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006999; P:nuclear pore organization; IMP:SGD.::GO:0043547; P:positive regulation of GTPase activity; IDA:SGD.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
1000Q61Y48    416   LIN53_CAEBR Probable histone-binding protein ...1179.8     32.3     23     44GO:0017053; C:transcriptional repressor complex; ISS:UniProtKB.
GO:0042826; F:histone deacetylase binding; ISS:UniProtKB.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0009792; P:embryo development ending in birth or egg hatching; ISS:UniProtKB.::GO:0040035; P:hermaphrodite genitalia development; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
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