Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR178W
Length:
465
Number of sequences:
5887
Description:
YPR178W PRP4 SGDID:S000006382, Chr XVI from 892332-893729, Genome Release 64-1-1, Verified ORF, "Splicing factor, component of the U4/U6-U5 snRNP complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
871B8P4B0    438   LIS11_POSPM Nuclear distribution protein PAC1...771.8     34.7     27     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
872Q28DW0    333   CIAO1_XENTR Probable cytosolic iron-sulfur pr...531.8     34.7     32     51
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
873Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...1221.8     34.7     24     42GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
874Q2GTM8    341   EIF3I_CHAGB Eukaryotic translation initiation...1581.8     34.7     28     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
875Q9QXL2    1672   KI21A_MOUSE Kinesin-like protein KIF21A OS=Mu...1851.8     35     25     41GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0030425; C:dendrite; IEA:UniProtKB-SubCell.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
876Q92176    461   COR1A_BOVIN Coronin-1A OS=Bos taurus (Bovine)...1131.8     34.7     25     42GO:0030864; C:cortical actin cytoskeleton; ISS:RefGenome.::GO:0030027; C:lamellipodium; ISS:RefGenome.::GO:0001891; C:phagocytic cup; ISS:RefGenome.::GO:0030670; C:phagocytic vesicle membrane; IEA:UniProtKB-SubCell.
GO:0051015; F:actin filament binding; ISS:RefGenome.
GO:0030595; P:leukocyte chemotaxis; ISS:RefGenome.::GO:0051126; P:negative regulation of actin nucleation; ISS:RefGenome.::GO:0001845; P:phagolysosome assembly; ISS:RefGenome.::GO:0050918; P:positive chemotaxis; ISS:RefGenome.::GO:0008360; P:regulation of cell shape; ISS:RefGenome.::GO:0032796; P:uropod organization; ISS:RefGenome.
877A6RUL1    335   EIF3I_BOTFB Eukaryotic translation initiation...2431.8     34.7     22     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
878O22212    554   PRP4_ARATH U4/U6 small nuclear ribonucleoprot...1471.9     34.7     24     44GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0001709; P:cell fate determination; IMP:TAIR.::GO:0007267; P:cell-cell signaling; IMP:TAIR.::GO:0009560; P:embryo sac egg cell differentiation; IMP:TAIR.::GO:0008380; P:RNA splicing; IEA:InterPro.
879Q54MP8    2200   Y5837_DICDI Bromodomain and WD repeat-contain...1031.9     35     21     45
880Q9HC35    981   EMAL4_HUMAN Echinoderm microtubule-associated...1212     34.7     27     45GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0007017; P:microtubule-based process; NAS:UniProtKB.::GO:0007067; P:mitosis; NAS:UniProtKB.
881A7RWD2    327   CIAO1_NEMVE Probable cytosolic iron-sulfur pr...2102.1     34.3     20     34
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
882B4HRQ6    335   CIAO1_DROSE Probable cytosolic iron-sulfur pr...442.1     34.3     32     61
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
883B4N0L0    322   EIF3I_DROWI Eukaryotic translation initiation...1852.1     34.3     21     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
884Q13033    797   STRN3_HUMAN Striatin-3 OS=Homo sapiens (Human...922.1     34.7     23     47GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005794; C:Golgi apparatus; IDA:UniProtKB.::GO:0043025; C:neuronal cell body; ISS:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.::GO:0005634; C:nucleus; IDA:UniProtKB.::GO:0005886; C:plasma membrane; IDA:UniProtKB.::GO:0043234; C:protein complex; ISS:UniProtKB.
GO:0070016; F:armadillo repeat domain binding; IPI:UniProtKB.::GO:0005516; F:calmodulin binding; NAS:UniProtKB.::GO:0032403; F:protein complex binding; IDA:UniProtKB.::GO:0051721; F:protein phosphatase 2A binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IDA:UniProtKB.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0032355; P:response to estradiol stimulus; ISS:UniProtKB.
885Q7K4B3    794   ELP2_DROME Probable elongator complex protein...1692.1     34.7     24     38GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0000502; C:proteasome complex; ISS:UniProtKB.
GO:0061133; F:endopeptidase activator activity; ISS:UniProtKB.
GO:0043248; P:proteasome assembly; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.
886B4QFZ8    335   CIAO1_DROSI Probable cytosolic iron-sulfur pr...442.2     34.3     32     61
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
887Q8TAF3    677   WDR48_HUMAN WD repeat-containing protein 48 O...1272.2     34.7     25     39GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0016579; P:protein deubiquitination; IDA:UniProtKB.
888Q32PG3    677   WDR48_BOVIN WD repeat-containing protein 48 O...1272.2     34.7     25     39GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
889A7EF03    335   EIF3I_SCLS1 Eukaryotic translation initiation...2442.2     34.3     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
890Q6FLI3    579   CAF4_CANGA CCR4-associated factor 4 homolog O...1202.2     34.7     28     43GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
891Q8SRB0    334   GBLP_ENCCU Guanine nucleotide-binding protein...952.2     34.3     24     52
892B3NQR5    335   CIAO1_DROER Probable cytosolic iron-sulfur pr...442.3     34.3     32     61
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
893Q6CKE8    434   PRP46_KLULA Pre-mRNA-splicing factor PRP46 OS...1282.3     34.3     23     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
894Q4R2Z6    622   WDR48_MACFA WD repeat-containing protein 48 O...1272.3     34.3     25     39GO:0005764; C:lysosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0016579; P:protein deubiquitination; ISS:UniProtKB.
895Q7Z4S6    1674   KI21A_HUMAN Kinesin-like protein KIF21A OS=Ho...2412.3     34.7     23     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003777; F:microtubule motor activity; IEA:InterPro.
GO:0007018; P:microtubule-based movement; IEA:InterPro.
896Q5FW06    457   DCA10_XENTR DDB1- and CUL4-associated factor ...1162.3     34.3     21     48GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:UniProtKB.
897Q3U3T8    1523   WDR62_MOUSE WD repeat-containing protein 62 O...742.3     34.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005634; C:nucleus; ISS:UniProtKB.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
898O14775    395   GBB5_HUMAN Guanine nucleotide-binding protein...1292.4     34.3     22     41GO:0005834; C:heterotrimeric G-protein complex; NAS:UniProtKB.
GO:0003924; F:GTPase activity; NAS:UniProtKB.::GO:0004871; F:signal transducer activity; NAS:UniProtKB.
899A7RM20    321   EIF3I_NEMVE Eukaryotic translation initiation...1462.5     33.9     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
900P79083    328   EIF3I_SCHPO Eukaryotic translation initiation...2592.6     33.9     23     37GO:0005829; C:cytosol; IDA:PomBase.::GO:0016282; C:eukaryotic 43S preinitiation complex; IDA:PomBase.::GO:0071540; C:eukaryotic translation initiation factor 3 complex, eIF3e; IDA:PomBase.::GO:0071541; C:eukaryotic translation initiation factor 3 complex, eIF3m; IDA:PomBase.::GO:0034399; C:nuclear periphery; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0065007; P:biological regulation; NAS:PomBase.::GO:0071470; P:cellular response to osmotic stress; IMP:PomBase.::GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.
901P90587    601   WD66_PHYPO 66 kDa stress protein OS=Physarum ...1632.7     34.3     23     41
records
Previous ‹‹ ›› Next Total records: 1000 871 - 900
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::