Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR178W
Length:
465
Number of sequences:
5887
Description:
YPR178W PRP4 SGDID:S000006382, Chr XVI from 892332-893729, Genome Release 64-1-1, Verified ORF, "Splicing factor, component of the U4/U6-U5 snRNP complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
691C4JZS6    446   LIS11_UNCRE Nuclear distribution protein PAC1...640.14     38.1     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
692Q5ZMC3    476   WSDU1_CHICK WD repeat, SAM and U-box domain-c...1300.14     38.1     27     45GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
693Q9WUM4    474   COR1C_MOUSE Coronin-1C OS=Mus musculus (Mouse...1290.14     38.1     24     44GO:0015629; C:actin cytoskeleton; IBA:RefGenome.
GO:0051015; F:actin filament binding; IBA:RefGenome.
GO:0000147; P:actin cortical patch assembly; TAS:MGI.::GO:0006909; P:phagocytosis; TAS:MGI.
694Q28D01    614   WDR26_XENTR WD repeat-containing protein 26 O...2420.14     38.5     22     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
695B4JW81    331   CIAO1_DROGR Probable cytosolic iron-sulfur pr...420.15     37.7     36     67
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
696P25635    923   PWP2_YEAST Periodic tryptophan protein 2 OS=S...1870.15     38.5     23     41GO:0005737; C:cytoplasm; IDA:SGD.::GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000910; P:cytokinesis; IMP:SGD.::GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0030010; P:establishment of cell polarity; IMP:SGD.
697Q9UNX4    943   WDR3_HUMAN WD repeat-containing protein 3 OS=...1380.15     38.5     26     47GO:0031965; C:nuclear membrane; IDA:HPA.::GO:0005730; C:nucleolus; IDA:HPA.
698Q5F3D7    520   UTP15_CHICK U3 small nucleolar RNA-associated...1250.15     38.1     26     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
699Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...1150.15     38.5     23     42GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
700O13982    399   YEC8_SCHPO Uncharacterized WD repeat-containi...3010.16     38.1     20     39GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0000027; P:ribosomal large subunit assembly; ISS:PomBase.
701Q5H7C0    499   CDC20_PIG Cell division cycle protein 20 homo...1930.16     38.1     21     39GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051488; P:activation of anaphase-promoting complex activity; ISS:UniProtKB.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0090129; P:positive regulation of synapse maturation; ISS:UniProtKB.::GO:0031915; P:positive regulation of synaptic plasticity; ISS:UniProtKB.
702B8M0Q1    459   LIS1_TALSN Nuclear distribution protein nudF ...850.17     38.1     31     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
703B4KRQ4    679   WDR48_DROMO WD repeat-containing protein 48 h...1270.17     38.1     21     43
704Q5BJQ6    431   CSTF1_RAT Cleavage stimulation factor subunit...1260.17     37.7     21     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
705Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...1260.17     37.7     21     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
706Q8K057    777   IFT80_MOUSE Intraflagellar transport protein ...700.17     38.1     29     49GO:0005813; C:centrosome; IDA:MGI.::GO:0035085; C:cilium axoneme; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
707A6ZZZ8    645   CAF4_YEAS7 CCR4-associated factor 4 OS=Saccha...2280.18     38.1     23     38GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
708P69104    318   GBLP_TRYBR Guanine nucleotide-binding protein...330.19     37.4     45     67
709P69103    318   GBLP_TRYBB Guanine nucleotide-binding protein...330.19     37.4     45     67
710P78972    488   SLP1_SCHPO WD repeat-containing protein slp1 ...1380.19     37.7     25     51GO:0032153; C:cell division site; IDA:PomBase.::GO:0000778; C:condensed nuclear chromosome kinetochore; IDA:PomBase.::GO:0033597; C:mitotic checkpoint complex; IDA:PomBase.::GO:0005816; C:spindle pole body; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007092; P:activation of mitotic anaphase-promoting complex activity; TAS:PomBase.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0034613; P:cellular protein localization; IGI:PomBase.::GO:0033314; P:mitotic cell cycle DNA replication checkpoint; IGI:PomBase.::GO:0007094; P:mitotic cell cycle spindle assembly checkpoint; IGI:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IGI:PomBase.
711Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...1190.2     37.7     23     45GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
712Q292E8    335   CIAO1_DROPS Probable cytosolic iron-sulfur pr...420.21     37.4     36     64
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
713Q7S7L4    486   LIS12_NEUCR Nuclear distribution protein pac1...2010.21     37.7     20     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
714A8PTE4    674   MDV1_MALGO Mitochondrial division protein 1 O...1560.21     37.7     22     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
715Q5ZLG9    973   WDR59_CHICK WD repeat-containing protein 59 O...620.21     37.7     24     53
716A8Q2R5    660   WDR48_BRUMA WD repeat-containing protein 48 h...1150.22     37.7     25     43
717Q1DPU4    340   EIF3I_COCIM Eukaryotic translation initiation...2500.22     37.4     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
718Q1LZ08    668   WDR48_DROME WD repeat-containing protein 48 h...1270.23     37.7     21     42
719Q2TZG4    610   PFS2_ASPOR Polyadenylation factor subunit 2 O...1620.23     37.7     22     41GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
720Q1DIW7    668   MDV1_COCIM Mitochondrial division protein 1 O...850.23     37.7     31     51GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
721Q16K15    326   EIF3I_AEDAE Eukaryotic translation initiation...1330.23     37.4     23     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 1000 691 - 720
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::