Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR178W
Length:
465
Number of sequences:
5887
Description:
YPR178W PRP4 SGDID:S000006382, Chr XVI from 892332-893729, Genome Release 64-1-1, Verified ORF, "Splicing factor, component of the U4/U6-U5 snRNP complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
661O13168    535   TLE1_DANRE Protein groucho-1 OS=Danio rerio (...1070.074     39.3     23     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
662Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...1210.076     39.3     30     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
663A7RHG8    416   WDR12_NEMVE Ribosome biogenesis protein WDR12...1120.077     38.9     29     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
664P41318    303   LST8_YEAST Target of rapamycin complex subuni...1030.077     38.9     24     41GO:0010008; C:endosome membrane; IDA:SGD.::GO:0031234; C:extrinsic to internal side of plasma membrane; IDA:SGD.::GO:0000139; C:Golgi membrane; IDA:SGD.::GO:0000300; C:peripheral to membrane of membrane fraction; IDA:SGD.::GO:0031931; C:TORC1 complex; IPI:SGD.::GO:0031932; C:TORC2 complex; IPI:SGD.::GO:0005774; C:vacuolar membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030295; F:protein kinase activator activity; IMP:SGD.
GO:0030950; P:establishment or maintenance of actin cytoskeleton polarity; IMP:SGD.::GO:0031505; P:fungal-type cell wall organization; IMP:SGD.::GO:0031930; P:mitochondria-nucleus signaling pathway; IMP:SGD.::GO:0031929; P:TOR signaling cascade; IMP:SGD.::GO:0006810; P:transport; IMP:SGD.
665A1D7I5    340   EIF3I_NEOFI Eukaryotic translation initiation...2510.08     38.9     22     41GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
666Q0CXH9    336   EIF3I_ASPTN Eukaryotic translation initiation...2470.08     38.9     21     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
667Q5I0B9    622   ATG16_XENTR Autophagy-related protein 16 OS=X...1600.083     38.9     24     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
668B4J8H6    667   WDR48_DROGR WD repeat-containing protein 48 h...1260.085     38.9     22     42
669Q9NZJ0    730   DTL_HUMAN Denticleless protein homolog OS=Hom...800.085     39.3     26     49GO:0005813; C:centrosome; IDA:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; IDA:UniProtKB.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0031572; P:G2/M transition DNA damage checkpoint; IMP:UniProtKB.::GO:0006513; P:protein monoubiquitination; IDA:UniProtKB.::GO:0000209; P:protein polyubiquitination; IDA:UniProtKB.::GO:0009411; P:response to UV; IDA:UniProtKB.::GO:0019985; P:translesion synthesis; IDA:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; IDA:UniProtKB.
670Q8K3E5    1047   AHI1_MOUSE Jouberin OS=Mus musculus (Mouse). ...2580.088     39.3     17     39GO:0005912; C:adherens junction; ISS:UniProtKB.::GO:0005911; C:cell-cell junction; ISS:UniProtKB.::GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.::GO:0035844; P:cloaca development; IGI:UniProtKB.::GO:0001947; P:heart looping; IGI:UniProtKB.::GO:0030902; P:hindbrain development; IGI:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; IMP:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0071599; P:otic vesicle development; IGI:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; IGI:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; IMP:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; IGI:UniProtKB.::GO:0033365; P:protein localization to organelle; IMP:UniProtKB.::GO:0050795; P:regulation of behavior; IMP:UniProtKB.::GO:0010842; P:retina layer formation; IGI:UniProtKB.::GO:0065001; P:specification of axis polarity; IGI:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; IMP:UniProtKB.::GO:0016192; P:vesicle-mediated transport; IMP:UniProtKB.
671P07834    779   CDC4_YEAST Cell division control protein 4 OS...1620.09     38.9     23     40GO:0016363; C:nuclear matrix; IDA:SGD.::GO:0043224; C:nuclear SCF ubiquitin ligase complex; IDA:SGD.
GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000082; P:G1/S transition of mitotic cell cycle; IMP:SGD.::GO:0000086; P:G2/M transition of mitotic cell cycle; IGI:SGD.::GO:0007126; P:meiosis; IMP:SGD.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0042787; P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0031146; P:SCF-dependent proteasomal ubiquitin-dependent protein catabolic process; IDA:SGD.::GO:0030435; P:sporulation resulting in formation of a cellular spore; IEA:UniProtKB-KW.
672Q7S7N3    446   HAT2_NEUCR Histone acetyltransferase type B s...1380.092     38.9     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
673B4LJT7    331   CIAO1_DROVI Probable cytosolic iron-sulfur pr...450.1     38.5     33     67
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
674O35242    920   FAN_MOUSE Protein FAN OS=Mus musculus (Mouse)...1180.1     38.9     24     45
GO:0005123; F:death receptor binding; TAS:MGI.
675Q6CJ50    705   MDV1_KLULA Mitochondrial division protein 1 O...600.1     38.9     32     53GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
676B6GZA1    673   SCONB_PENCW Probable E3 ubiquitin ligase comp...740.1     38.9     31     55
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
677P36130    643   CAF4_YEAST CCR4-associated factor 4 OS=Saccha...2260.1     38.9     23     38GO:0030014; C:CCR4-NOT complex; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0000266; P:mitochondrial fission; IMP:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IMP:SGD.
678Q05048    431   CSTF1_HUMAN Cleavage stimulation factor subun...1260.11     38.5     21     45GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.
GO:0006379; P:mRNA cleavage; TAS:ProtInc.::GO:0006378; P:mRNA polyadenylation; TAS:ProtInc.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; TAS:Reactome.::GO:0006369; P:termination of RNA polymerase II transcription; TAS:Reactome.
679D1ZEM6    486   LIS12_SORMK Nuclear distribution protein PAC1...2010.11     38.5     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
680B7PY76    425   WDR12_IXOSC Ribosome biogenesis protein WDR12...1690.11     38.5     24     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
681Q5ZMV7    313   WDR82_CHICK WD repeat-containing protein 82 O...1310.11     38.1     24     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
682P0CS38    881   HIR1_CRYNJ Protein HIR1 OS=ATCC MYA-565) (Fil...2600.11     38.9     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
683P0CS39    881   HIR1_CRYNB Protein HIR1 OS=(Filobasidiella ne...2600.11     38.9     22     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
684B4MFM2    667   WDR48_DROVI WD repeat-containing protein 48 h...1270.12     38.5     21     43
685Q9FUY2    931   LEUNG_ARATH Transcriptional corepressor LEUNI...970.12     38.5     26     47GO:0005634; C:nucleus; IDA:TAIR.
GO:0046982; F:protein heterodimerization activity; IPI:TAIR.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IMP:TAIR.::GO:0080001; P:mucilage extrusion from seed coat; IMP:TAIR.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
686O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...1250.13     38.5     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
687Q5AXW3    654   MDV1_EMENI Mitochondrial division protein 1 O...1660.13     38.5     23     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
688A1CJY4    340   EIF3I_ASPCL Eukaryotic translation initiation...2500.13     38.1     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
689A4RDD7    341   EIF3I_MAGO7 Eukaryotic translation initiation...2660.13     38.1     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0043581; P:mycelium development; IEP:PAMGO_MGG.
690B4GDM7    335   CIAO1_DROPE Probable cytosolic iron-sulfur pr...450.14     38.1     33     64
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
691C4JZS6    446   LIS11_UNCRE Nuclear distribution protein PAC1...640.14     38.1     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
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