Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR178W
Length:
465
Number of sequences:
5887
Description:
YPR178W PRP4 SGDID:S000006382, Chr XVI from 892332-893729, Genome Release 64-1-1, Verified ORF, "Splicing factor, component of the U4/U6-U5 snRNP complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
511A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...1280.003     43.5     32     45GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
512O88879    1249   APAF_MOUSE Apoptotic protease-activating fact...2180.003     43.9     21     40GO:0005634; C:nucleus; IDA:MGI.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0016505; F:apoptotic protease activator activity; IPI:MGI.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0042802; F:identical protein binding; IPI:MGI.
GO:0006952; P:defense response; IEA:InterPro.::GO:0006309; P:DNA fragmentation involved in apoptotic nuclear change; IGI:MGI.::GO:0030900; P:forebrain development; IMP:MGI.::GO:0001843; P:neural tube closure; IMP:MGI.::GO:0051402; P:neuron apoptotic process; IGI:MGI.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
513Q6GPP0    622   WDR70_XENLA WD repeat-containing protein 70 O...1420.003     43.9     27     42
514Q6CB13    565   MDV1_YARLI Mitochondrial division protein 1 O...1620.003     43.5     25     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
515Q9I9H8    1261   APAF_DANRE Apoptotic protease-activating fact...740.003     43.9     30     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0043531; F:ADP binding; IEA:InterPro.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0006952; P:defense response; IEA:InterPro.::GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
516Q8CFD5    397   ERCC8_MOUSE DNA excision repair protein ERCC-...2110.003     43.5     21     42
GO:0009411; P:response to UV; IMP:MGI.::GO:0010165; P:response to X-ray; IMP:MGI.
517Q5R650    495   WDR37_PONAB WD repeat-containing protein 37 O...2080.003     43.5     21     33
518Q6KAU8    623   A16L2_MOUSE Autophagy-related protein 16-2 OS...2100.003     43.5     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
519Q26544    301   WSL17_SCHMA WD repeat-containing protein SL1-...1810.004     42.7     23     46
520Q922B6    594   TRAF7_MOUSE E3 ubiquitin-protein ligase TRAF7...1480.004     43.1     26     49GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; ISS:UniProtKB.
GO:0004842; F:ubiquitin-protein ligase activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0000185; P:activation of MAPKKK activity; ISS:UniProtKB.::GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0042981; P:regulation of apoptotic process; ISS:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
521B6GZD3    464   LIS12_PENCW Nuclear distribution protein nudF...1400.004     43.1     29     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
522Q54S79    942   WDR3_DICDI WD repeat-containing protein 3 hom...1640.004     43.5     23     44GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
523Q8VZS9    475   FZR1_ARATH Protein FIZZY-RELATED 1 OS=Arabido...1800.004     43.1     26     49GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0032877; P:positive regulation of DNA endoreduplication; IMP:TAIR.
524P40217    347   EIF3I_YEAST Eukaryotic translation initiation...1600.004     43.1     26     43GO:0005852; C:eukaryotic translation initiation factor 3 complex; IDA:SGD.::GO:0043614; C:multi-eIF complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003743; F:translation initiation factor activity; IDA:SGD.
GO:0002188; P:translation reinitiation; IMP:SGD.
525A6ZMK5    347   EIF3I_YEAS7 Eukaryotic translation initiation...1600.004     43.1     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
526Q5RHI5    647   DTL_DANRE Denticleless protein homolog OS=Dan...960.004     43.1     27     48GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IMP:ZFIN.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
527P97499    2629   TEP1_MOUSE Telomerase protein component 1 OS=...2030.004     43.5     22     39GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.::GO:0005625; C:soluble fraction; IDA:MGI.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IMP:UniProtKB.
528A2QEV8    337   EIF3I_ASPNC Eukaryotic translation initiation...790.004     42.7     24     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
529B2B766    468   LIS12_PODAN Nuclear distribution protein PAC1...1040.005     42.7     32     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
530C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...1010.005     42.7     28     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
531B3RQN1    432   WDR12_TRIAD Ribosome biogenesis protein WDR12...1950.005     42.7     22     45GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
532Q0D0X6    446   LIS1_ASPTN Nuclear distribution protein nudF ...2140.005     43.1     21     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
533Q6Q0C0    670   TRAF7_HUMAN E3 ubiquitin-protein ligase TRAF7...1390.005     42.7     26     48GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0000151; C:ubiquitin ligase complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0004842; F:ubiquitin-protein ligase activity; IDA:UniProtKB.::GO:0008270; F:zinc ion binding; NAS:UniProtKB.
GO:0000185; P:activation of MAPKKK activity; IDA:UniProtKB.::GO:0006915; P:apoptotic process; IDA:MGI.::GO:0043410; P:positive regulation of MAPK cascade; IDA:MGI.::GO:0042981; P:regulation of apoptotic process; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
534P14197    478   AAC3_DICDI WD repeat-containing protein AAC3 ...1080.005     42.7     24     47
535Q9UKT8    454   FBXW2_HUMAN F-box/WD repeat-containing protei...1210.005     42.7     26     46
GO:0004842; F:ubiquitin-protein ligase activity; TAS:ProtInc.
GO:0006508; P:proteolysis; TAS:ProtInc.
536Q58D00    454   FBXW2_BOVIN F-box/WD repeat-containing protei...1210.005     42.7     26     46
537Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...2900.005     43.1     19     38GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
538P49027    334   GBLPA_ORYSJ Guanine nucleotide-binding protei...2160.006     42.4     22     43GO:0005886; C:plasma membrane; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0050832; P:defense response to fungus; IMP:UniProtKB.::GO:0060267; P:positive regulation of respiratory burst; IMP:UniProtKB.
539P53622    1201   COPA_YEAST Coatomer subunit alpha OS=Saccharo...1240.007     42.7     27     41GO:0030126; C:COPI vesicle coat; IMP:SGD.
GO:0005198; F:structural molecule activity; IEA:InterPro.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0006888; P:ER to Golgi vesicle-mediated transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; IMP:SGD.
540Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...3470.008     42     22     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
541B6QC06    452   LIS12_PENMQ Nuclear distribution protein nudF...750.008     42     33     55GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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