Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR178W
Length:
465
Number of sequences:
5887
Description:
YPR178W PRP4 SGDID:S000006382, Chr XVI from 892332-893729, Genome Release 64-1-1, Verified ORF, "Splicing factor, component of the U4/U6-U5 snRNP complex"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
481C6HTE8    456   LIS1_AJECH Nuclear distribution protein PAC1 ...610.001     45.1     34     59GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
482C0NRC6    456   LIS1_AJECG Nuclear distribution protein PAC1 ...610.001     45.1     34     59GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
483P35606    906   COPB2_HUMAN Coatomer subunit beta' OS=Homo sa...2580.001     45.4     16     40GO:0015629; C:actin cytoskeleton; IDA:HPA.::GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0048205; P:COPI coating of Golgi vesicle; TAS:Reactome.::GO:0006891; P:intra-Golgi vesicle-mediated transport; IDA:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
484Q5R664    906   COPB2_PONAB Coatomer subunit beta' OS=Pongo a...2580.001     45.4     16     40GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
485P35605    906   COPB2_BOVIN Coatomer subunit beta' OS=Bos tau...2580.001     45.4     16     40GO:0030126; C:COPI vesicle coat; IDA:UniProtKB.
GO:0005080; F:protein kinase C binding; ISS:AgBase.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; TAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0006890; P:retrograde vesicle-mediated transport, Golgi to ER; TAS:UniProtKB.
486Q4R4I8    906   COPB2_MACFA Coatomer subunit beta' OS=Macaca ...2580.001     45.4     16     40GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
487Q55FR9    1221   COPA_DICDI Coatomer subunit alpha OS=Dictyost...2130.001     45.1     23     39GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
488O14170    703   POP2_SCHPO WD repeat-containing protein pop2 ...1910.001     45.1     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005635; C:nuclear envelope; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0032876; P:negative regulation of DNA endoreduplication; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.::GO:0006511; P:ubiquitin-dependent protein catabolic process; TAS:PomBase.
489B4LS78    419   WDR12_DROVI Ribosome biogenesis protein WDR12...2150.001     44.7     25     40GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
490Q9C1X0    297   YN55_SCHPO Uncharacterized WD repeat-containi...1160.001     44.7     23     47GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
491Q54KM3    754   CDH1_DICDI Anaphase-promoting complex subunit...1020.001     45.4     29     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
492Q8CBE3    496   WDR37_MOUSE WD repeat-containing protein 37 O...2710.001     45.1     20     36
493Q60584    422   FBXW2_MOUSE F-box/WD repeat-containing protei...1220.001     44.7     28     47GO:0005737; C:cytoplasm; IDA:MGI.
494Q2GSJ9    1080   HIR1_CHAGB Protein HIR1 OS=6347 / NRRL 1970) ...1480.001     45.1     24     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
495A8XZJ9    390   LIS1_CAEBR Lissencephaly-1 homolog OS=Caenorh...1040.002     44.3     25     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
496Q9CAA0    920   COB21_ARATH Coatomer subunit beta'-1 OS=Arabi...2080.002     44.3     22     39GO:0030663; C:COPI coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
497Q8L3Z8    483   FZR2_ARATH Protein FIZZY-RELATED 2 OS=Arabido...2420.002     44.3     19     40
GO:0005515; F:protein binding; IPI:TAIR.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016049; P:cell growth; IMP:TAIR.::GO:0042023; P:DNA endoreduplication; IMP:TAIR.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0010091; P:trichome branching; IMP:TAIR.
498Q09855    506   POF11_SCHPO F-box/WD repeat-containing protei...1540.002     44.3     24     43GO:0005829; C:cytosol; IDA:PomBase.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.
499A7THX0    706   MDV1_VANPO Mitochondrial division protein 1 O...2250.002     44.3     20     39GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
500A1CBP8    655   MDV1_ASPCL Mitochondrial division protein 1 O...2660.002     44.3     24     40GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
501Q09150    302   REC14_SCHPO Meiotic recombination protein rec...1610.002     43.9     25     43GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0055087; C:Ski complex; ISS:PomBase.
GO:0006402; P:mRNA catabolic process; ISS:PomBase.::GO:0007131; P:reciprocal meiotic recombination; IMP:PomBase.
502Q54LT8    293   STRAP_DICDI Serine-threonine kinase receptor-...2210.002     43.9     23     44
GO:0004872; F:receptor activity; ISS:dictyBase.
GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; ISS:dictyBase.
503B8M7Q5    667   SCONB_TALSN Probable E3 ubiquitin ligase comp...2440.002     44.3     21     38
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
504A4RJV3    661   MDV1_MAGO7 Mitochondrial division protein 1 O...800.002     44.7     29     55GO:0030015; C:CCR4-NOT core complex; ISS:PAMGO_MGG.::GO:0005741; C:mitochondrial outer membrane; ISS:PAMGO_MGG.
GO:0051020; F:GTPase binding; ISS:PAMGO_MGG.
GO:0000266; P:mitochondrial fission; ISS:PAMGO_MGG.::GO:0000002; P:mitochondrial genome maintenance; ISS:PAMGO_MGG.::GO:0006402; P:mRNA catabolic process; ISS:PAMGO_MGG.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:PAMGO_MGG.::GO:0006354; P:transcription elongation, DNA-dependent; ISS:PAMGO_MGG.::GO:0006352; P:transcription initiation, DNA-dependent; ISS:PAMGO_MGG.
505Q6P1W0    713   DTL_XENTR Denticleless protein homolog OS=Xen...1620.002     43.9     24     46GO:0005813; C:centrosome; ISS:UniProtKB.::GO:0031464; C:Cul4A-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0031465; C:Cul4B-RING ubiquitin ligase complex; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006513; P:protein monoubiquitination; ISS:UniProtKB.::GO:0000209; P:protein polyubiquitination; ISS:UniProtKB.::GO:0009411; P:response to UV; ISS:UniProtKB.::GO:0019985; P:translesion synthesis; ISS:UniProtKB.::GO:0006511; P:ubiquitin-dependent protein catabolic process; ISS:UniProtKB.
506O14186    846   YDSB_SCHPO Uncharacterized WD repeat-containi...1790.002     44.3     25     36GO:0005829; C:cytosol; IDA:PomBase.::GO:0005778; C:peroxisomal membrane; NAS:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
507B2RZ17    454   FBXW2_RAT F-box/WD repeat-containing protein ...1210.002     43.9     26     46
508Q8NAA4    619   A16L2_HUMAN Autophagy-related protein 16-2 OS...2670.002     44.7     22     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0006914; P:autophagy; IEA:UniProtKB-KW.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
509A7TNS8    669   CAF4_VANPO CCR4-associated factor 4 homolog O...1650.002     44.3     22     42GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
510A9VDW7    506   CIAO1_MONBE Probable cytosolic iron-sulfur pr...2180.003     43.5     21     42
511A0AUS0    487   WSDU1_DANRE WD repeat, SAM and U-box domain-c...1280.003     43.5     32     45GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
records
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