Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR137W
Length:
573
Number of sequences:
5887
Description:
YPR137W RRP9 SGDID:S000006341, Chr XVI from 802359-804080, Genome Release 64-1-1, Verified ORF, "Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
691Q6NVM2    655   KTNB1_XENTR Katanin p80 WD40-containing subun...1936.6     33.5     21     39GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
692O35828    443   CORO7_RAT Coronin-7 OS=Rattus norvegicus (Rat...496.7     33.1     39     61GO:0016023; C:cytoplasmic membrane-bounded vesicle; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.::GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0000299; C:integral to membrane of membrane fraction; ISS:UniProtKB.::GO:0005625; C:soluble fraction; ISS:UniProtKB.
693B4LKS9    780   BOP1_DROVI Ribosome biogenesis protein BOP1 h...456.7     33.5     29     56GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
694Q5REE0    518   UTP15_PONAB U3 small nucleolar RNA-associated...586.8     33.1     31     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
695P32479    840   HIR1_YEAST Protein HIR1 OS=Saccharomyces cere...2546.9     33.5     23     40GO:0000775; C:chromosome, centromeric region; IDA:SGD.::GO:0000417; C:HIR complex; IDA:SGD.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:SGD.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006336; P:DNA replication-independent nucleosome assembly; IDA:SGD.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IGI:SGD.
696Q20636    356   GBB2_CAEEL Guanine nucleotide-binding protein...1256.9     33.1     21     42GO:0043025; C:neuronal cell body; IDA:WormBase.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007212; P:dopamine receptor signaling pathway; IMP:WormBase.::GO:0007631; P:feeding behavior; IMP:WormBase.::GO:0007213; P:G-protein coupled acetylcholine receptor signaling pathway; IMP:WormBase.::GO:0008277; P:regulation of G-protein coupled receptor protein signaling pathway; IGI:WormBase.::GO:0040012; P:regulation of locomotion; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.::GO:0043051; P:regulation of pharyngeal pumping; IMP:WormBase.::GO:0032094; P:response to food; IMP:WormBase.
697Q5HH31    1256   ATL_STAAC Bifunctional autolysin OS=Staphyloc...1067     33.5     26     49GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
GO:0004040; F:amidase activity; IEA:InterPro.::GO:0033925; F:mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity; IEA:EC.::GO:0008745; F:N-acetylmuramoyl-L-alanine amidase activity; IEA:EC.
GO:0010382; P:cellular cell wall macromolecule metabolic process; IEA:InterPro.::GO:0007047; P:cellular cell wall organization; IEA:UniProtKB-KW.::GO:0009253; P:peptidoglycan catabolic process; IEA:InterPro.
698Q23256    501   YH92_CAEEL Uncharacterized WD repeat-containi...1237.2     33.1     21     43
699Q55563    1693   Y163_SYNY3 Uncharacterized WD repeat-containi...1477.4     33.5     24     40
GO:0005488; F:binding; IEA:InterPro.
700Q8C7V3    528   UTP15_MOUSE U3 small nucleolar RNA-associated...567.4     33.1     32     55GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
701Q8TED0    518   UTP15_HUMAN U3 small nucleolar RNA-associated...587.4     33.1     31     55GO:0005737; C:cytoplasm; IDA:LIFEdb.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
702Q7K0Y1    784   BOP1_DROME Ribosome biogenesis protein BOP1 h...1227.4     33.1     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
703B3NLK7    784   BOP1_DROER Ribosome biogenesis protein BOP1 h...1227.4     33.1     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
704P93340    326   GBLP_NICPL Guanine nucleotide-binding protein...1657.5     32.7     24     42
705A8XSW2    691   WDR48_CAEBR WD repeat-containing protein 48 h...1087.5     33.1     23     49
706B4P528    784   BOP1_DROYA Ribosome biogenesis protein BOP1 h...1227.6     33.1     24     47GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
707B6QC06    452   LIS12_PENMQ Nuclear distribution protein nudF...1357.7     33.1     24     41GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
708Q6PH57    340   GBB1_DANRE Guanine nucleotide-binding protein...1227.8     32.7     19     43
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
709Q2UBU2    1058   HIR1_ASPOR Protein HIR1 OS=Aspergillus oryzae...777.8     33.1     30     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
710C5FWH1    461   LIS1_ARTOC Nuclear distribution protein PAC1 ...1517.8     33.1     24     40GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
711Q17963    376   TG125_CAEEL WD repeat-containing protein tag-...937.9     32.7     23     43GO:0005634; C:nucleus; IDA:WormBase.
GO:0008340; P:determination of adult lifespan; IMP:WormBase.::GO:0051568; P:histone H3-K4 methylation; IMP:WormBase.::GO:0040027; P:negative regulation of vulval development; IMP:WormBase.::GO:0000003; P:reproduction; IMP:WormBase.
712B8P4B0    438   LIS11_POSPM Nuclear distribution protein PAC1...867.9     33.1     20     43GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
713Q6FJZ9    427   PRP46_CANGA Pre-mRNA-splicing factor PRP46 OS...1268.3     32.7     21     40GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
714P52287    340   GBB3_RAT Guanine nucleotide-binding protein G...1198.3     32.7     20     41
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
715A7E3S5    414   WDR4_BOVIN tRNA (guanine-N(7)-)-methyltransfe...568.3     32.7     34     52
716Q9FE91    419   C3H62_ARATH Zinc finger CCCH domain-containin...1948.4     32.7     23     38
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
717B6QC56    459   LIS11_PENMQ Nuclear distribution protein nudF...1648.5     32.7     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
718Q9LXN4    1024   HIRA_ARATH Protein HIRA OS=Arabidopsis thalia...1408.6     33.1     21     42GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0045814; P:negative regulation of gene expression, epigenetic; TAS:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
719A0JP70    1848   WDR90_XENTR WD repeat-containing protein 90 O...738.6     33.1     25     49
720Q2TBP4    407   POC1A_BOVIN POC1 centriolar protein homolog A...338.7     32.7     42     58GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
721D1ZEB4    460   LIS11_SORMK Nuclear distribution protein PAC1...1428.7     32.7     24     44GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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