Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR137W
Length:
573
Number of sequences:
5887
Description:
YPR137W RRP9 SGDID:S000006341, Chr XVI from 802359-804080, Genome Release 64-1-1, Verified ORF, "Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
631Q99LC2    431   CSTF1_MOUSE Cleavage stimulation factor subun...814.7     33.9     27     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
632Q6PBD6    305   WDR61_XENTR WD repeat-containing protein 61 O...834.7     33.5     24     45GO:0016593; C:Cdc73/Paf1 complex; ISS:UniProtKB.::GO:0055087; C:Ski complex; ISS:UniProtKB.::GO:0035327; C:transcriptionally active chromatin; ISS:UniProtKB.
GO:0080182; P:histone H3-K4 trimethylation; ISS:UniProtKB.::GO:0051571; P:positive regulation of histone H3-K4 methylation; ISS:UniProtKB.::GO:2001162; P:positive regulation of histone H3-K79 methylation; ISS:UniProtKB.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
633Q9VUI3    1076   EMAL_DROME Echinoderm microtubule-associated ...754.7     33.9     31     49GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0071683; C:sensory dendrite; IDA:FlyBase.
GO:0008017; F:microtubule binding; IDA:FlyBase.
GO:0008344; P:adult locomotory behavior; IMP:FlyBase.::GO:0035556; P:intracellular signal transduction; IEA:InterPro.::GO:0007605; P:sensory perception of sound; IMP:FlyBase.
634Q5ZMA2    505   PRP19_CHICK Pre-mRNA-processing factor 19 OS=...714.8     33.9     27     45GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004842; F:ubiquitin-protein ligase activity; IEA:InterPro.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
635P58405    794   STRN3_RAT Striatin-3 OS=Rattus norvegicus (Ra...764.8     33.9     21     53GO:0030425; C:dendrite; IDA:RGD.::GO:0043025; C:neuronal cell body; IDA:RGD.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0032403; F:protein complex binding; IDA:RGD.
GO:0033147; P:negative regulation of intracellular estrogen receptor signaling pathway; IMP:RGD.::GO:0032355; P:response to estradiol stimulus; IDA:RGD.
636Q5ZMV7    313   WDR82_CHICK WD repeat-containing protein 82 O...1154.8     33.5     20     44GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
637Q12523    523   YP247_YEAST WD repeat-containing protein YPL2...754.8     33.9     29     45GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
638D4AM37    663   SCONB_ARTBC Probable E3 ubiquitin ligase comp...1214.8     33.9     26     41
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
639Q2HJH6    358   SNR40_BOVIN U5 small nuclear ribonucleoprotei...984.9     33.5     28     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
640Q0CXH9    336   EIF3I_ASPTN Eukaryotic translation initiation...774.9     33.5     31     45GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
641Q5XX13    1052   FBW10_HUMAN F-box/WD repeat-containing protei...1194.9     33.9     23     43
642P54686    597   WD42_DICDI WD repeat-containing protein 2 hom...1115     33.9     29     41GO:0060187; C:cell pole; IDA:dictyBase.::GO:0030864; C:cortical actin cytoskeleton; IDA:dictyBase.::GO:0001891; C:phagocytic cup; IDA:dictyBase.
GO:0030042; P:actin filament depolymerization; IMP:dictyBase.::GO:0008283; P:cell proliferation; IMP:dictyBase.::GO:0006935; P:chemotaxis; IMP:dictyBase.::GO:0006909; P:phagocytosis; IMP:dictyBase.::GO:0006907; P:pinocytosis; IMP:dictyBase.
643Q9EP82    413   WDR4_MOUSE tRNA (guanine-N(7)-)-methyltransfe...575     33.5     33     53GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
644Q9NYS7    404   WSB2_HUMAN WD repeat and SOCS box-containing ...445     33.5     32     52
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
645Q14137    746   BOP1_HUMAN Ribosome biogenesis protein BOP1 O...675     33.9     27     49GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0008283; P:cell proliferation; NAS:UniProtKB.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:UniProtKB.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.
646Q0CQ54    999   HIR1_ASPTN Protein hir1 OS=Aspergillus terreu...755.1     33.9     31     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
647Q9JMJ4    504   PRP19_RAT Pre-mRNA-processing factor 19 OS=Ra...1135.1     33.5     26     43GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
648Q99KP6    504   PRP19_MOUSE Pre-mRNA-processing factor 19 OS=...1135.1     33.5     26     43GO:0005811; C:lipid particle; IDA:MGI.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0001833; P:inner cell mass cell proliferation; IMP:MGI.::GO:0008610; P:lipid biosynthetic process; IDA:MGI.::GO:0045665; P:negative regulation of neuron differentiation; IDA:MGI.::GO:0048711; P:positive regulation of astrocyte differentiation; IDA:MGI.::GO:0048026; P:positive regulation of nuclear mRNA splicing, via spliceosome; IMP:MGI.
649Q8BFQ4    313   WDR82_MOUSE WD repeat-containing protein 82 O...1155.1     33.5     20     44GO:0000785; C:chromatin; ISS:UniProtKB.::GO:0072357; C:PTW/PP1 phosphatase complex; ISS:UniProtKB.
650Q6UXN9    313   WDR82_HUMAN WD repeat-containing protein 82 O...1155.1     33.5     20     44GO:0000785; C:chromatin; IDA:UniProtKB.::GO:0072357; C:PTW/PP1 phosphatase complex; IDA:UniProtKB.::GO:0048188; C:Set1C/COMPASS complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0051568; P:histone H3-K4 methylation; IDA:UniProtKB.
651Q0V8J1    406   WSB2_BOVIN WD repeat and SOCS box-containing ...445.1     33.5     32     52
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
652P25387    318   GBLP_CHLRE Guanine nucleotide-binding protein...1655.2     33.5     24     42
653O45040    340   GBB1_HOMAM Guanine nucleotide-binding protein...1825.2     33.5     21     35
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
654A5D7H2    797   STRN3_BOVIN Striatin-3 OS=Bos taurus (Bovine)...765.2     33.9     21     53GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.
655A8WGF4    1189   IF122_XENTR Intraflagellar transport protein ...345.2     33.9     35     65GO:0005929; C:cilium; IEA:UniProtKB-SubCell.::GO:0005932; C:microtubule basal body; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.
GO:0030030; P:cell projection organization; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
656Q4V7Y7    655   KTNB1_XENLA Katanin p80 WD40-containing subun...1245.3     33.5     23     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
657Q8HXL3    1541   WDR62_PIG WD repeat-containing protein 62 OS=...2245.3     33.9     22     40GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0021987; P:cerebral cortex development; ISS:UniProtKB.
658Q640J6    313   WD82A_XENLA WD repeat-containing protein 82-A...625.3     33.5     27     50GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
659P56094    682   TUP1_KLULA General transcriptional corepresso...1735.4     33.5     19     37
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
660Q6BVZ3    504   PFS2_DEBHA Polyadenylation factor subunit 2 O...1225.4     33.5     20     42GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
661Q08E38    504   PRP19_BOVIN Pre-mRNA-processing factor 19 OS=...1135.4     33.5     26     43GO:0005819; C:spindle; IEA:UniProtKB-SubCell.::GO:0000151; C:ubiquitin ligase complex; IEA:InterPro.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
records
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