Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR137W
Length:
573
Number of sequences:
5887
Description:
YPR137W RRP9 SGDID:S000006341, Chr XVI from 802359-804080, Genome Release 64-1-1, Verified ORF, "Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
61Q6C709    441   PRP46_YARLI Pre-mRNA-splicing factor PRP46 OS...1210.003     43.9     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
62Q676U5    607   A16L1_HUMAN Autophagy-related protein 16-1 OS...1190.004     43.9     24     39GO:0005776; C:autophagic vacuole; ISS:UniProtKB.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000045; P:autophagic vacuole assembly; NAS:UniProtKB.::GO:0051260; P:protein homooligomerization; NAS:UniProtKB.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
63Q55AR8    355   SNR40_DICDI U5 small nuclear ribonucleoprotei...1170.004     43.5     23     47GO:0005681; C:spliceosomal complex; ISS:dictyBase.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:dictyBase.
64Q3UMY5    988   EMAL4_MOUSE Echinoderm microtubule-associated...1450.004     43.9     25     47GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
65Q39190    479   PRL2_ARATH Protein pleiotropic regulator PRL2...2760.004     43.5     18     35GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.
GO:0005515; F:protein binding; IPI:TAIR.
66A2QVV2    591   CREC_ASPNC Probable catabolite repression pro...740.004     43.5     32     50
GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
67Q9C270    899   PWP2_NEUCR Periodic tryptophan protein 2 homo...950.005     43.5     28     53
68Q5DFU0    352   CIAO1_SCHJA Probable cytosolic iron-sulfur pr...980.005     43.1     27     48
GO:0016226; P:iron-sulfur cluster assembly; ISS:UniProtKB.
69Q8YV57    1683   Y2124_NOSS1 Uncharacterized WD repeat-contain...3320.006     43.5     21     40
GO:0004197; F:cysteine-type endopeptidase activity; IEA:InterPro.
GO:0006508; P:proteolysis; IEA:InterPro.
70A1DMI8    603   CREC_NEOFI Probable catabolite repression pro...740.006     43.1     32     50
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
71P93107    606   PF20_CHLRE Flagellar WD repeat-containing pro...1170.006     43.1     23     40GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IEA:UniProtKB-SubCell.
72Q9C1X1    854   PWP2_SCHPO Periodic tryptophan protein 2 homo...2170.006     43.5     22     40GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005732; C:small nucleolar ribonucleoprotein complex; ISS:PomBase.
GO:0030515; F:snoRNA binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
73Q6P4J8    513   SMU1_XENTR WD40 repeat-containing protein SMU...1150.006     43.1     23     44GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
74Q8TBZ3    569   WDR20_HUMAN WD repeat-containing protein 20 O...380.006     43.1     47     63
75A1CTE6    573   CREC_ASPCL Probable catabolite repression pro...740.006     43.1     32     50
GO:0045013; P:carbon catabolite repression of transcription; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
76P93563    377   GBB_SOLTU Guanine nucleotide-binding protein ...1800.006     42.7     22     40
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
77P87060    775   POP1_SCHPO WD repeat-containing protein pop1 ...1070.006     43.1     26     46GO:0005634; C:nucleus; IDA:PomBase.::GO:0019005; C:SCF ubiquitin ligase complex; IDA:PomBase.
GO:0030674; F:protein binding, bridging; IPI:PomBase.
GO:0006995; P:cellular response to nitrogen starvation; IGI:PomBase.::GO:0000747; P:conjugation with cellular fusion; IMP:PomBase.::GO:0008054; P:cyclin catabolic process; IMP:PomBase.::GO:0007346; P:regulation of mitotic cell cycle; IC:PomBase.
78B7PS00    411   LIS1_IXOSC Lissencephaly-1 homolog OS=Ixodes ...2880.007     42.7     19     41GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
79Q12788    808   TBL3_HUMAN Transducin beta-like protein 3 OS=...1250.007     43.1     25     45GO:0005730; C:nucleolus; IDA:HPA.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0005057; F:receptor signaling protein activity; TAS:ProtInc.
GO:0007199; P:G-protein signaling, coupled to cGMP nucleotide second messenger; TAS:ProtInc.::GO:0006364; P:rRNA processing; IEA:InterPro.
80Q4RJN5    410   LIS1_TETNG Lissencephaly-1 homolog OS=nigrovi...1540.007     42.7     23     43GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
81O42249    317   GBLP_ORENI Guanine nucleotide-binding protein...1480.007     42.4     26     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0030178; P:negative regulation of Wnt receptor signaling pathway; ISS:UniProtKB.::GO:2000543; P:positive regulation of gastrulation; ISS:UniProtKB.::GO:0051302; P:regulation of cell division; ISS:UniProtKB.::GO:2000114; P:regulation of establishment of cell polarity; ISS:UniProtKB.::GO:0032880; P:regulation of protein localization; ISS:UniProtKB.
82Q8C0J2    607   A16L1_MOUSE Autophagy-related protein 16-1 OS...1380.008     42.7     24     38GO:0000421; C:autophagic vacuole membrane; IDA:MGI.::GO:0034045; C:pre-autophagosomal structure membrane; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:MGI.
GO:0000045; P:autophagic vacuole assembly; TAS:MGI.::GO:0015031; P:protein transport; IEA:UniProtKB-KW.
83Q17LZ2    866   BOP1_AEDAE Ribosome biogenesis protein BOP1 h...600.008     42.7     37     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
84Q8HXX0    410   LIS1_MACFA Platelet-activating factor acetylh...2860.009     42.4     20     40GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0031965; C:nuclear membrane; IEA:UniProtKB-SubCell.::GO:0005819; C:spindle; IEA:UniProtKB-SubCell.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0016042; P:lipid catabolic process; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
85Q9BQ87    522   TBL1Y_HUMAN F-box-like/WD repeat-containing p...750.009     42.4     28     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
86P16649    713   TUP1_YEAST General transcriptional corepresso...1190.01     42.4     24     50GO:0017053; C:transcriptional repressor complex; IDA:SGD.
GO:0042393; F:histone binding; IDA:SGD.::GO:0042826; F:histone deacetylase binding; IDA:SGD.::GO:0036033; F:mediator complex binding; IDA:SGD.::GO:0080025; F:phosphatidylinositol-3,5-bisphosphate binding; IDA:SGD.::GO:0001191; F:RNA polymerase II transcription factor binding transcription factor activity involved in negative regulation of transcription; IDA:SGD.::GO:0043130; F:ubiquitin binding; IDA:SGD.
GO:0043486; P:histone exchange; IMP:SGD.::GO:0035955; P:negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:0001198; P:negative regulation of mating-type specific transcription from RNA polymerase II promoter; IMP:SGD.::GO:0000433; P:negative regulation of transcription from RNA polymerase II promoter by glucose; IMP:SGD.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; IMP:SGD.::GO:0016584; P:nucleosome positioning; IDA:SGD.::GO:2000531; P:regulation of fatty acid biosynthetic process by regulation of transcription from RNA polymerase II promoter; IMP:SGD.::GO:2001020; P:regulation of response to DNA damage stimulus; IMP:SGD.::GO:0061418; P:regulation of transcription from RNA polymerase II promoter in response to hypoxia; IMP:SGD.::GO:0061392; P:regulation of transcription from RNA polymerase II promoter in response to osmotic stress; IMP:SGD.
87P49846    704   TAF5_DROME Transcription initiation factor TF...1160.01     42.4     25     40GO:0000124; C:SAGA complex; IPI:FlyBase.::GO:0005669; C:transcription factor TFIID complex; IDA:FlyBase.
GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IDA:GOC.
88Q6L4F8    336   GBLPB_ORYSJ Guanine nucleotide-binding protei...3440.01     42     22     38
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
89Q86TI4    376   WDR86_HUMAN WD repeat-containing protein 86 O...2470.01     42     23     38
90O94620    340   CWF17_SCHPO Pre-mRNA-splicing factor cwf17 OS...1180.01     42     24     46GO:0005681; C:spliceosomal complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; IC:PomBase.
91O08653    2629   TEP1_RAT Telomerase protein component 1 OS=Ra...3370.01     42.7     21     37GO:0000781; C:chromosome, telomeric region; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
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