Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR137W
Length:
573
Number of sequences:
5887
Description:
YPR137W RRP9 SGDID:S000006341, Chr XVI from 802359-804080, Genome Release 64-1-1, Verified ORF, "Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
541Q6BYU4    985   HIR1_DEBHA Protein HIR1 OS=0083 / IGC 2968) (...582.6     34.7     29     48GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
542Q5BLX8    315   WDR83_RAT WD repeat domain-containing protein...772.6     34.3     23     49GO:0005737; C:cytoplasm; IDA:UniProtKB.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
543Q2UFN8    705   SCONB_ASPOR Probable E3 ubiquitin ligase comp...1322.6     34.7     26     42
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
544B8NGT5    706   SCONB_ASPFN Probable E3 ubiquitin ligase comp...1322.6     34.7     26     42
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
545Q8K3E5    1047   AHI1_MOUSE Jouberin OS=Mus musculus (Mouse). ...862.6     34.7     29     42GO:0005912; C:adherens junction; ISS:UniProtKB.::GO:0005911; C:cell-cell junction; ISS:UniProtKB.::GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.::GO:0036038; C:TCTN-B9D complex; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.::GO:0035844; P:cloaca development; IGI:UniProtKB.::GO:0001947; P:heart looping; IGI:UniProtKB.::GO:0030902; P:hindbrain development; IGI:UniProtKB.::GO:0070121; P:Kupffer's vesicle development; ISS:UniProtKB.::GO:0070986; P:left/right axis specification; ISS:UniProtKB.::GO:0001738; P:morphogenesis of a polarized epithelium; IMP:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IMP:UniProtKB.::GO:0071599; P:otic vesicle development; IGI:UniProtKB.::GO:0035845; P:photoreceptor cell outer segment organization; IGI:UniProtKB.::GO:0030862; P:positive regulation of polarized epithelial cell differentiation; IMP:UniProtKB.::GO:0002092; P:positive regulation of receptor internalization; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0039023; P:pronephric duct morphogenesis; ISS:UniProtKB.::GO:0039008; P:pronephric nephron tubule morphogenesis; IGI:UniProtKB.::GO:0033365; P:protein localization to organelle; IMP:UniProtKB.::GO:0050795; P:regulation of behavior; IMP:UniProtKB.::GO:0010842; P:retina layer formation; IGI:UniProtKB.::GO:0065001; P:specification of axis polarity; IGI:UniProtKB.::GO:0007169; P:transmembrane receptor protein tyrosine kinase signaling pathway; IMP:UniProtKB.::GO:0016192; P:vesicle-mediated transport; IMP:UniProtKB.
546P17343    340   GBB1_CAEEL Guanine nucleotide-binding protein...1542.7     34.3     21     36
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0000132; P:establishment of mitotic spindle orientation; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040013; P:negative regulation of locomotion; IMP:WormBase.::GO:0018991; P:oviposition; IMP:WormBase.::GO:0035046; P:pronuclear migration; IMP:WormBase.::GO:0046662; P:regulation of oviposition; IMP:WormBase.
547Q61ZF6    340   GBB1_CAEBR Guanine nucleotide-binding protein...1542.7     34.3     21     36
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
548Q91854    518   TRCB_XENLA Beta-TrCP OS=Xenopus laevis (Afric...1152.7     34.7     23     43
GO:0046983; F:protein dimerization activity; IEA:InterPro.
GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
549O74184    314   WAT1_SCHPO WD repeat-containing protein wat1 ...1292.7     34.3     23     38GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0031931; C:TORC1 complex; IDA:PomBase.::GO:0031932; C:TORC2 complex; IDA:PomBase.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000226; P:microtubule cytoskeleton organization; IMP:PomBase.::GO:0000070; P:mitotic sister chromatid segregation; IMP:PomBase.::GO:0006397; P:mRNA processing; IMP:PomBase.::GO:0031929; P:TOR signaling cascade; TAS:PomBase.
550Q54KM3    754   CDH1_DICDI Anaphase-promoting complex subunit...332.7     34.7     45     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
551Q12417    451   PRP46_YEAST Pre-mRNA-splicing factor PRP46 OS...1362.7     34.7     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
552B6K1G6    616   CFD1_SCHJY Probable cytosolic Fe-S cluster as...782.7     34.7     28     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
553Q8K450    639   SPG16_MOUSE Sperm-associated antigen 16 prote...1192.7     34.7     20     34GO:0035085; C:cilium axoneme; IDA:UniProtKB.::GO:0035086; C:flagellar axoneme; IDA:MGI.::GO:0005874; C:microtubule; IDA:MGI.::GO:0005634; C:nucleus; IDA:MGI.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0019901; F:protein kinase binding; IPI:UniProtKB.
GO:0042384; P:cilium assembly; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; IMP:MGI.
554Q9V3J8    361   WDS_DROME Protein will die slowly OS=Drosophi...1212.8     34.3     19     42GO:0005671; C:Ada2/Gcn5/Ada3 transcription activator complex; IPI:FlyBase.::GO:0005875; C:microtubule associated complex; IDA:FlyBase.::GO:0048188; C:Set1C/COMPASS complex; IDA:FlyBase.
GO:0051568; P:histone H3-K4 methylation; IMP:FlyBase.::GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.
555P79959    340   GBB1_XENLA Guanine nucleotide-binding protein...1552.8     34.3     21     35
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
556Q8TC44    478   POC1B_HUMAN POC1 centriolar protein homolog B...2742.8     34.7     22     39GO:0005814; C:centriole; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0042384; P:cilium assembly; IMP:UniProtKB.
557O35353    340   GBB4_RAT Guanine nucleotide-binding protein s...702.8     34.3     26     50
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
558P29387    340   GBB4_MOUSE Guanine nucleotide-binding protein...702.8     34.3     26     50
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
559Q09715    614   TUP11_SCHPO Transcriptional repressor tup11 O...1272.9     34.7     24     38GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0042393; F:histone binding; IDA:PomBase.::GO:0003714; F:transcription corepressor activity; IGI:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0006342; P:chromatin silencing; TAS:PomBase.::GO:0045014; P:negative regulation of transcription by glucose; IMP:PomBase.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEP:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
560Q6NLV4    647   FY_ARATH Flowering time control protein FY OS...2262.9     34.7     22     41GO:0080008; C:CUL4 RING ubiquitin ligase complex; IPI:TAIR.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0009908; P:flower development; IEA:UniProtKB-KW.::GO:0006397; P:mRNA processing; IGI:TAIR.::GO:0009909; P:regulation of flower development; IMP:TAIR.
561B4KT48    411   LIS1_DROMO Lissencephaly-1 homolog OS=Drosoph...1042.9     34.3     21     39GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
562O54929    404   WSB2_MOUSE WD repeat and SOCS box-containing ...442.9     34.3     34     52
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
563Q9P5P0    468   CIAO1_NEUCR Probable cytosolic iron-sulfur pr...312.9     34.3     42     68
564Q2KJJ5    800   TBL3_BOVIN Transducin beta-like protein 3 OS=...3043     34.7     23     38GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0032040; C:small-subunit processome; IEA:InterPro.
GO:0006364; P:rRNA processing; IEA:InterPro.
565Q0P593    415   WDR69_BOVIN Outer row dynein assembly protein...1713     34.3     22     37GO:0005929; C:cilium; IEA:UniProtKB-SubCell.
566P79147    340   GBB3_CANFA Guanine nucleotide-binding protein...1193.1     34.3     22     40GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
567Q5BDU4    1031   HIR1_EMENI Protein hir1 OS=194 / M139) (Asper...743.1     34.7     31     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
568P54319    795   PLAP_RAT Phospholipase A-2-activating protein...1403.1     34.3     24     42
569Q62440    770   TLE1_MOUSE Transducin-like enhancer protein 1...1063.1     34.7     21     37GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005667; C:transcription factor complex; IDA:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:MGI.
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB cascade; ISS:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
570P91341    910   PWP2_CAEEL Periodic tryptophan protein 2 homo...633.3     34.3     27     48
GO:0040007; P:growth; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.
571O14301    595   YE85_SCHPO Uncharacterized WD repeat-containi...733.3     34.3     29     49GO:0030479; C:actin cortical patch; ISS:PomBase.::GO:0032153; C:cell division site; IDA:PomBase.::GO:0051286; C:cell tip; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.
GO:0030042; P:actin filament depolymerization; ISS:PomBase.
records
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