Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR137W
Length:
573
Number of sequences:
5887
Description:
YPR137W RRP9 SGDID:S000006341, Chr XVI from 802359-804080, Genome Release 64-1-1, Verified ORF, "Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
451Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...1551.2     35.8     21     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
452Q4V8C4    328   WDR5B_RAT WD repeat-containing protein 5B OS=...1191.3     35.4     23     39
453B4MYI5    778   BOP1_DROWI Ribosome biogenesis protein BOP1 h...451.3     35.8     31     60GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
454Q62441    773   TLE4_MOUSE Transducin-like enhancer protein 4...1061.3     35.8     21     38GO:0005634; C:nucleus; IC:MGI.
GO:0003682; F:chromatin binding; IDA:MGI.::GO:0070491; F:repressing transcription factor binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:MGI.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IDA:MGI.
455Q9UKT8    454   FBXW2_HUMAN F-box/WD repeat-containing protei...941.3     35.4     24     47
GO:0004842; F:ubiquitin-protein ligase activity; TAS:ProtInc.
GO:0006508; P:proteolysis; TAS:ProtInc.
456Q58D00    454   FBXW2_BOVIN F-box/WD repeat-containing protei...941.3     35.4     24     47
457Q9AUR8    1218   COPA1_ORYSJ Coatomer subunit alpha-1 OS=Oryza...1551.3     35.8     21     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
458A8PWQ8    356   CIAO1_MALGO Probable cytosolic iron-sulfur pr...1641.3     35.4     21     38
459Q9AUR7    1218   COPA2_ORYSJ Coatomer subunit alpha-2 OS=Oryza...871.3     35.8     23     46GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
460Q8TEB1    546   DCA11_HUMAN DDB1- and CUL4-associated factor ...1351.3     35.4     26     43GO:0080008; C:CUL4 RING ubiquitin ligase complex; IDA:UniProtKB.
GO:0016567; P:protein ubiquitination; IC:UniProtKB.
461Q2GP45    452   CIAO1_CHAGB Probable cytosolic iron-sulfur pr...311.3     35.4     42     71
462Q04725    743   TLE2_HUMAN Transducin-like enhancer protein 2...1061.3     35.8     20     37GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003714; F:transcription corepressor activity; IDA:UniProtKB.
GO:0090090; P:negative regulation of canonical Wnt receptor signaling pathway; IDA:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0009887; P:organ morphogenesis; TAS:ProtInc.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
463Q54Y96    530   SMU1_DICDI WD40 repeat-containing protein smu...751.4     35.4     32     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
464O76734    579   TUP1_DICDI General transcriptional corepresso...1161.4     35.4     22     43GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
465Q8H0T9    837   KTNB1_ARATH Katanin p80 WD40 repeat-containin...1941.4     35.4     23     38GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:TAIR.
466A8NEG8    434   LIS1_COPC7 Nuclear distribution protein PAC1 ...1061.4     35.4     25     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
467Q5BDJ5    446   CIAO1_EMENI Probable cytosolic iron-sulfur pr...1031.4     35.4     24     46
468Q1DR81    473   CIAO1_COCIM Probable cytosolic iron-sulfur pr...1001.4     35.4     24     46
469Q29HG9    315   LST8_DROPS Protein LST8 homolog OS=Drosophila...1251.4     35     25     38GO:0005737; C:cytoplasm; ISS:UniProtKB.
470O75083    606   WDR1_HUMAN WD repeat-containing protein 1 OS=...801.4     35.4     28     48GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005576; C:extracellular region; TAS:Reactome.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
GO:0030168; P:platelet activation; TAS:Reactome.::GO:0002576; P:platelet degranulation; TAS:Reactome.::GO:0007605; P:sensory perception of sound; TAS:ProtInc.
471Q5XGE2    515   UTP15_XENTR U3 small nucleolar RNA-associated...721.4     35.4     28     46GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
472Q12220    943   UTP12_YEAST U3 small nucleolar RNA-associated...1171.5     35.4     18     43GO:0034388; C:Pwp2p-containing subcomplex of 90S preribosome; IDA:SGD.::GO:0032040; C:small-subunit processome; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0030515; F:snoRNA binding; IPI:SGD.
GO:0000480; P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000447; P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000472; P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.
473Q9Y263    795   PLAP_HUMAN Phospholipase A-2-activating prote...1401.5     35.4     24     42
GO:0016005; F:phospholipase A2 activator activity; TAS:ProtInc.
GO:0006644; P:phospholipid metabolic process; TAS:ProtInc.::GO:0007165; P:signal transduction; TAS:ProtInc.
474Q6C553    1058   HIR1_YARLI Protein HIR1 OS=lipolytica). GN=HI...311.5     35.4     45     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
475B4MU54    423   WDR12_DROWI Ribosome biogenesis protein WDR12...3081.5     35.4     22     39GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.::GO:0070545; C:PeBoW complex; ISS:UniProtKB.
GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); ISS:UniProtKB.
476Q61011    340   GBB3_MOUSE Guanine nucleotide-binding protein...1191.6     35     22     40GO:0005834; C:heterotrimeric G-protein complex; TAS:MGI.
GO:0003924; F:GTPase activity; TAS:MGI.::GO:0004871; F:signal transducer activity; IEA:UniProtKB-KW.
GO:0007186; P:G-protein coupled receptor signaling pathway; TAS:MGI.
477Q54S59    299   WDR61_DICDI WD repeat-containing protein 61 h...911.6     35     25     45
478Q61FW2    589   SEL10_CAEBR F-box/WD repeat-containing protei...2151.6     35.4     22     37
479Q8BHD1    476   POC1B_MOUSE POC1 centriolar protein homolog B...1161.6     35.4     24     41GO:0005814; C:centriole; ISS:UniProtKB.::GO:0005932; C:microtubule basal body; ISS:UniProtKB.
GO:0042384; P:cilium assembly; ISS:UniProtKB.
480O88342    606   WDR1_MOUSE WD repeat-containing protein 1 OS=...1221.6     35.4     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
481A3LNI7    524   LIS1_PICST Nuclear distribution protein PAC1 ...2031.6     35.4     25     39GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
records
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