Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR137W
Length:
573
Number of sequences:
5887
Description:
YPR137W RRP9 SGDID:S000006341, Chr XVI from 802359-804080, Genome Release 64-1-1, Verified ORF, "Protein involved in pre-rRNA processing, associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
421Q70M86    845   STRN_SORMK Striatin Pro11 OS=K-hell). GN=pro1...761     36.2     26     54GO:0016020; C:membrane; IEA:UniProtKB-SubCell.::GO:0005624; C:membrane fraction; IDA:UniProtKB.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IMP:UniProtKB.::GO:0000909; P:sporocarp development involved in sexual reproduction; IMP:UniProtKB.
422P25382    515   NLE1_YEAST Ribosome assembly protein 4 OS=Sac...311.1     35.8     48     71GO:0005730; C:nucleolus; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000027; P:ribosomal large subunit assembly; IMP:SGD.
423Q9DAW6    521   PRP4_MOUSE U4/U6 small nuclear ribonucleoprot...1331.1     35.8     22     38GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
424P0CS42    433   LIS1_CRYNJ Nuclear distribution protein PAC1 ...3571.1     35.8     18     37GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
425P0CS43    433   LIS1_CRYNB Nuclear distribution protein PAC1 ...3571.1     35.8     18     37GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
426Q5ACW8    853   HIR1_CANAL Protein HIR1 OS=Candida albicans (...541.1     35.8     33     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
427O13985    512   YEG3_SCHPO Uncharacterized WD repeat-containi...1521.1     35.8     19     41GO:0033186; C:CAF-1 complex; IDA:PomBase.::GO:0016585; C:chromatin remodeling complex; IDA:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0000790; C:nuclear chromatin; IC:PomBase.::GO:0043596; C:nuclear replication fork; IDA:PomBase.
GO:0005515; F:protein binding; IPI:PomBase.
GO:0030437; P:ascospore formation; IMP:PomBase.::GO:0006338; P:chromatin remodeling; NAS:PomBase.::GO:0006335; P:DNA replication-dependent nucleosome assembly; IC:PomBase.::GO:0070829; P:heterochromatin maintenance; IMP:PomBase.::GO:0035067; P:negative regulation of histone acetylation; IMP:PomBase.::GO:0090053; P:positive regulation of chromatin silencing at centromere; IMP:PomBase.::GO:0090055; P:positive regulation of chromatin silencing at silent mating-type cassette; IMP:PomBase.::GO:0051574; P:positive regulation of histone H3-K9 methylation; IMP:PomBase.::GO:0034504; P:protein localization to nucleus; IMP:PomBase.
428Q8VDD9    1821   PHIP_MOUSE PH-interacting protein OS=Mus musc...1061.1     36.2     20     43GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0007010; P:cytoskeleton organization; ISS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; IDA:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; IMP:UniProtKB.::GO:0043568; P:positive regulation of insulin-like growth factor receptor signaling pathway; IDA:UniProtKB.::GO:0045840; P:positive regulation of mitosis; IMP:UniProtKB.::GO:0045893; P:positive regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; ISS:UniProtKB.::GO:0001932; P:regulation of protein phosphorylation; IDA:UniProtKB.
429Q61666    1015   HIRA_MOUSE Protein HIRA OS=Mus musculus (Mous...1481.1     35.8     23     45GO:0000790; C:nuclear chromatin; IDA:MGI.::GO:0016605; C:PML body; IEA:UniProtKB-SubCell.
GO:0003682; F:chromatin binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:MGI.
GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0007369; P:gastrulation; IMP:MGI.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
430Q8WWQ0    1821   PHIP_HUMAN PH-interacting protein OS=Homo sap...1061.1     36.2     20     43GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005158; F:insulin receptor binding; NAS:UniProtKB.
GO:0007010; P:cytoskeleton organization; IMP:UniProtKB.::GO:0008286; P:insulin receptor signaling pathway; NAS:UniProtKB.::GO:0043066; P:negative regulation of apoptotic process; ISS:UniProtKB.::GO:0008284; P:positive regulation of cell proliferation; ISS:UniProtKB.::GO:0043568; P:positive regulation of insulin-like growth factor receptor signaling pathway; ISS:UniProtKB.::GO:0045840; P:positive regulation of mitosis; ISS:UniProtKB.::GO:0022604; P:regulation of cell morphogenesis; IMP:UniProtKB.
431O95834    649   EMAL2_HUMAN Echinoderm microtubule-associated...1371.1     35.8     26     46GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0043231; C:intracellular membrane-bounded organelle; IDA:HPA.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; TAS:ProtInc.
GO:0003824; F:catalytic activity; IEA:InterPro.
GO:0007605; P:sensory perception of sound; TAS:ProtInc.::GO:0007601; P:visual perception; TAS:ProtInc.
432P46800    329   GBLP_DICDI Guanine nucleotide-binding protein...721.2     35.4     31     46GO:0005813; C:centrosome; IDA:dictyBase.::GO:0045335; C:phagocytic vesicle; IDA:dictyBase.
433Q9FLX9    473   NLE1_ARATH Notchless protein homolog OS=Arabi...611.2     35.8     36     51GO:0080008; C:CUL4 RING ubiquitin ligase complex; ISS:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
434B4MY65    409   LIS1_DROWI Lissencephaly-1 homolog OS=Drosoph...1041.2     35.4     22     39GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
435Q2KJH4    606   WDR1_BOVIN WD repeat-containing protein 1 OS=...801.2     35.8     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
436B4P6P9    411   LIS1_DROYA Lissencephaly-1 homolog OS=Drosoph...1041.2     35.4     28     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
437B3NPW0    411   LIS1_DROER Lissencephaly-1 homolog OS=Drosoph...1041.2     35.4     28     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
438B4QHG6    411   LIS1_DROSI Lissencephaly-1 homolog OS=Drosoph...1041.2     35.4     28     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
439B4HSL3    411   LIS1_DROSE Lissencephaly-1 homolog OS=Drosoph...1041.2     35.4     28     42GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0006810; P:transport; IEA:UniProtKB-KW.
440Q7KNS3    411   LIS1_DROME Lissencephaly-1 homolog OS=Drosoph...1041.2     35.4     28     42GO:0030424; C:axon; IDA:UniProtKB.::GO:0005938; C:cell cortex; IDA:FlyBase.::GO:0000777; C:condensed chromosome kinetochore; IEA:UniProtKB-SubCell.::GO:0030425; C:dendrite; IDA:UniProtKB.::GO:0005869; C:dynactin complex; IDA:FlyBase.::GO:0030286; C:dynein complex; IDA:FlyBase.::GO:0005828; C:kinetochore microtubule; IDA:FlyBase.::GO:0043025; C:neuronal cell body; IDA:UniProtKB.::GO:0031616; C:spindle pole centrosome; IDA:FlyBase.
GO:0045502; F:dynein binding; ISS:UniProtKB.
GO:0008088; P:axon cargo transport; IMP:FlyBase.::GO:0051299; P:centrosome separation; IMP:FlyBase.::GO:0030381; P:chorion-containing eggshell pattern formation; IMP:UniProtKB.::GO:0007303; P:cytoplasmic transport, nurse cell to oocyte; IMP:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0046843; P:dorsal appendage formation; IMP:UniProtKB.::GO:0048142; P:germarium-derived cystoblast division; IMP:UniProtKB.::GO:0007294; P:germarium-derived oocyte fate determination; IMP:UniProtKB.::GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0006886; P:intracellular protein transport; IMP:FlyBase.::GO:0051383; P:kinetochore organization; IMP:FlyBase.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0007093; P:mitotic cell cycle checkpoint; IMP:FlyBase.::GO:0016319; P:mushroom body development; IMP:UniProtKB.::GO:0007405; P:neuroblast proliferation; IMP:UniProtKB.::GO:0030473; P:nuclear migration along microtubule; IGI:FlyBase.::GO:0007312; P:oocyte nucleus migration involved in oocyte dorsal/ventral axis specification; IMP:FlyBase.::GO:0030723; P:ovarian fusome organization; IMP:UniProtKB.::GO:0030510; P:regulation of BMP signaling pathway; IDA:FlyBase.::GO:0048814; P:regulation of dendrite morphogenesis; IMP:FlyBase.::GO:0043143; P:regulation of translation by machinery localization; IMP:UniProtKB.::GO:0051225; P:spindle assembly; IMP:FlyBase.::GO:0019827; P:stem cell maintenance; IDA:FlyBase.
441Q5RKI0    606   WDR1_RAT WD repeat-containing protein 1 OS=Ra...801.2     35.8     28     48GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005856; C:cytoskeleton; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.
442B4J9K1    786   BOP1_DROGR Ribosome biogenesis protein BOP1 h...451.2     35.8     31     58GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0051726; P:regulation of cell cycle; IEA:InterPro.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
443Q03177    834   YMZ2_YEAST WD repeat-containing protein YMR10...1111.2     35.8     29     42
444Q5ZIU8    657   KTNB1_CHICK Katanin p80 WD40-containing subun...1931.2     35.8     22     37GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005815; C:microtubule organizing center; IEA:UniProtKB-SubCell.::GO:0000922; C:spindle pole; IEA:UniProtKB-SubCell.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.
445A4IGH4    413   WDR4_DANRE tRNA (guanine-N(7)-)-methyltransfe...291.2     35.4     52     66GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0006400; P:tRNA modification; ISS:UniProtKB.
446O42469    767   TLE1_XENLA Transducin-like enhancer protein 1...1061.2     35.8     21     37GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
447O42478    772   TLE4_XENLA Transducin-like enhancer protein 4...1061.2     35.8     21     38GO:0017053; C:transcriptional repressor complex; IPI:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003714; F:transcription corepressor activity; IGI:UniProtKB.
GO:0001707; P:mesoderm formation; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
448Q04727    773   TLE4_HUMAN Transducin-like enhancer protein 4...1061.2     35.8     21     38GO:0005654; C:nucleoplasm; TAS:Reactome.
GO:0007219; P:Notch signaling pathway; TAS:Reactome.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0016055; P:Wnt receptor signaling pathway; IEA:UniProtKB-KW.
449P0CS32    341   EIF3I_CRYNJ Eukaryotic translation initiation...601.2     35.4     32     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
450P0CS33    341   EIF3I_CRYNB Eukaryotic translation initiation...601.2     35.4     32     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
451Q0J3D9    1218   COPA3_ORYSJ Coatomer subunit alpha-3 OS=Oryza...1551.2     35.8     21     38GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
records
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