Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR112C
Length:
887
Number of sequences:
5887
Description:
YPR112C MRD1 SGDID:S000006316, Chr XVI from 751919-749256, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential conserved protein that is part of the 90S preribosome; required for production of 18S rRNA and small ribosomal subunit; contains five consensus RNA-binding domains"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
391Q9UNP9    301   PPIE_HUMAN Peptidyl-prolyl cis-trans isomeras...540.47     37.4     30     61GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.
GO:0016018; F:cyclosporin A binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; TAS:UniProtKB.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:UniProtKB.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.
392P92965    350   RSP40_ARATH Arginine/serine-rich-splicing fac...1440.47     37.4     22     47GO:0016607; C:nuclear speck; IDA:TAIR.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0008380; P:RNA splicing; NAS:TAIR.
393B4JXU2    260   EI3G2_DROGR Eukaryotic translation initiation...700.47     37.4     29     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
394Q0IEY3    688   EIF3B_AEDAE Eukaryotic translation initiation...700.47     37.7     30     54GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.
GO:0006446; P:regulation of translational initiation; ISS:UniProtKB.
395Q8WXF0    261   SRS12_HUMAN Serine/arginine-rich splicing fac...780.48     37     28     58GO:0005654; C:nucleoplasm; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; NAS:UniProtKB.::GO:0050733; F:RS domain binding; NAS:UniProtKB.::GO:0051082; F:unfolded protein binding; NAS:UniProtKB.
GO:0000244; P:assembly of spliceosomal tri-snRNP; NAS:UniProtKB.::GO:0016482; P:cytoplasmic transport; ISS:UniProtKB.::GO:0048025; P:negative regulation of nuclear mRNA splicing, via spliceosome; ISS:UniProtKB.::GO:0000395; P:nuclear mRNA 5'-splice site recognition; IDA:UniProtKB.::GO:0000381; P:regulation of alternative nuclear mRNA splicing, via spliceosome; IDA:UniProtKB.
396Q24668    354   SXL_DROSU Protein sex-lethal OS=Drosophila su...1910.48     37.4     23     42
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0007548; P:sex differentiation; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
397Q8VWF5    800   AML5_ARATH Protein MEI2-like 5 OS=Arabidopsis...1740.48     37.7     21     43
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB.
398Q9QZH3    301   PPIE_MOUSE Peptidyl-prolyl cis-trans isomeras...540.49     37.4     30     61GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003755; F:peptidyl-prolyl cis-trans isomerase activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0006457; P:protein folding; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
399Q6BT10    276   EIF3G_DEBHA Eukaryotic translation initiation...550.49     37.4     31     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
400P16914    483   ELAV_DROME Protein elav OS=Drosophila melanog...2400.5     37.7     22     35GO:0015030; C:Cajal body; IDA:FlyBase.
GO:0003729; F:mRNA binding; NAS:FlyBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0008266; F:poly(U) RNA binding; IDA:FlyBase.::GO:0000900; F:translation repressor activity, nucleic acid binding; NAS:UniProtKB.
GO:0007417; P:central nervous system development; IMP:FlyBase.::GO:0009790; P:embryo development; NAS:UniProtKB.::GO:0007281; P:germ cell development; NAS:UniProtKB.::GO:0031441; P:negative regulation of mRNA 3'-end processing; IDA:FlyBase.::GO:0007319; P:negative regulation of oskar mRNA translation; NAS:UniProtKB.
401Q08935    273   ROC1_NICSY 29 kDa ribonucleoprotein A, chloro...760.51     37     26     47GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
402Q8CH84    359   ELAV2_RAT ELAV-like protein 2 OS=Rattus norve...800.51     37.4     34     53
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
403Q9LYN7    907   AML4_ARATH Protein MEI2-like 4 OS=Arabidopsis...820.51     37.7     30     52
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007126; P:meiosis; IEA:UniProtKB-KW.::GO:0048507; P:meristem development; IGI:TAIR.::GO:0045927; P:positive regulation of growth; IMP:UniProtKB.::GO:0045836; P:positive regulation of meiosis; IMP:UniProtKB.
404Q3T127    220   U2AF4_BOVIN Splicing factor U2AF 26 kDa subun...600.51     37     37     57GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
405Q9ZQW8    290   U2AFA_ORYSJ Splicing factor U2af small subuni...670.51     37.4     27     55GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
406Q8R3C6    952   RBM19_MOUSE Probable RNA-binding protein 19 O...570.52     37.7     35     58GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005737; C:cytoplasm; IDA:UniProtKB.::GO:0005730; C:nucleolus; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0040019; P:positive regulation of embryonic development; IMP:UniProtKB.
407Q60899    360   ELAV2_MOUSE ELAV-like protein 2 OS=Mus muscul...800.52     37.4     34     53
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
408B3M3R5    597   SHEP_DROAN Protein alan shepard OS=Drosophila...1790.52     37.7     21     45
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009629; P:response to gravity; ISS:UniProtKB.
409Q569Z1    688   EIF3B_XENLA Eukaryotic translation initiation...700.52     37.7     29     56GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0006446; P:regulation of translational initiation; ISS:UniProtKB.
410Q5R9Z6    359   ELAV2_PONAB ELAV-like protein 2 OS=Pongo abel...800.53     37.4     34     53
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
411Q12926    359   ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapie...800.53     37.4     34     53
GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:ProtInc.
412Q95192    295   DAZL_MACFA Deleted in azoospermia-like OS=Mac...810.53     37     32     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
413Q1DXH0    768   PABP_COCIM Polyadenylate-binding protein, cyt...770.55     37.7     25     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
414O89086    153   RBM3_MOUSE Putative RNA-binding protein 3 OS=...910.55     35.8     31     48GO:0005737; C:cytoplasm; ISS:UniProtKB.::GO:0030425; C:dendrite; ISS:UniProtKB.::GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0043023; F:ribosomal large subunit binding; IPI:MGI.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0045727; P:positive regulation of translation; ISS:UniProtKB.::GO:0035196; P:production of miRNAs involved in gene silencing by miRNA; IDA:MGI.::GO:0009409; P:response to cold; IDA:MGI.::GO:0006412; P:translation; IDA:MGI.
415P08199    714   NUCL_MESAU Nucleolin OS=Mesocricetus auratus ...910.56     37.7     30     46GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; ISS:UniProtKB.::GO:0042162; F:telomeric DNA binding; ISS:UniProtKB.
416Q5XG24    283   RNP1A_XENLA RNA-binding protein with serine-r...330.56     37     45     61GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
417Q6PBM8    188   RBM18_DANRE Probable RNA-binding protein 18 O...820.56     36.6     29     51
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
418Q92904    295   DAZL_HUMAN Deleted in azoospermia-like OS=Hom...810.56     37     32     53GO:0005737; C:cytoplasm; TAS:ProtInc.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; TAS:ProtInc.::GO:0008494; F:translation activator activity; IDA:UniProtKB.
GO:0007281; P:germ cell development; TAS:ProtInc.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0045948; P:positive regulation of translational initiation; IDA:UniProtKB.::GO:0007283; P:spermatogenesis; IEA:UniProtKB-KW.
419Q9H0L4    616   CSTFT_HUMAN Cleavage stimulation factor subun...720.57     37.4     31     56GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
420Q754W7    218   NCBP2_ASHGO Nuclear cap-binding protein subun...710.57     36.6     24     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006370; P:mRNA capping; IEA:UniProtKB-KW.::GO:0051028; P:mRNA transport; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.::GO:0006364; P:rRNA processing; IEA:UniProtKB-KW.
421Q8BIQ5    580   CSTF2_MOUSE Cleavage stimulation factor subun...720.58     37.4     31     56GO:0071920; C:cleavage body; ISS:UniProtKB.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 879 391 - 420
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::