rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q06102 | 208 | YTH1_YEAST mRNA 3'-end-processing protein YTH... | 208 | 2e-152 | 428 | 100 | 100 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:SGD. | | | | | | | | | | GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IDA:SGD.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006379; P:mRNA cleavage; IDA:SGD.::GO:0006378; P:mRNA polyadenylation; IDA:SGD. | 2 | Q758T3 | 209 | YTH1_ASHGO mRNA 3'-end-processing protein YTH... | 208 | 1e-124 | 358 | 78 | 91 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 3 | Q6FTL0 | 209 | YTH1_CANGA mRNA 3'-end-processing protein YTH... | 207 | 7e-121 | 348 | 79 | 88 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 4 | Q6CKU1 | 210 | YTH1_KLULA mRNA 3'-end-processing protein YTH... | 208 | 6e-119 | 343 | 75 | 88 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 5 | Q6BTT1 | 223 | YTH1_DEBHA mRNA 3'-end-processing protein YTH... | 214 | 9e-82 | 249 | 57 | 70 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 6 | Q59T36 | 215 | YTH1_CANAL mRNA 3'-end-processing protein YTH... | 195 | 4e-78 | 239 | 56 | 73 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0042493; P:response to drug; IMP:CGD. | 7 | Q6C922 | 193 | YTH1_YARLI mRNA 3'-end-processing protein YTH... | 189 | 1e-68 | 214 | 56 | 69 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 8 | Q4IPA4 | 411 | YTH1_GIBZE mRNA 3'-end-processing protein YTH... | 195 | 2e-56 | 189 | 46 | 64 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 9 | Q7SGR2 | 317 | YTH1_NEUCR mRNA 3'-end-processing protein yth... | 197 | 3e-53 | 179 | 45 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 10 | Q4WKD9 | 254 | YTH1_ASPFU mRNA 3'-end-processing protein yth... | 188 | 2e-46 | 159 | 43 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 11 | Q2URI6 | 255 | YTH1_ASPOR mRNA 3'-end-processing protein yth... | 175 | 7e-46 | 158 | 45 | 60 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 12 | Q5BGN2 | 254 | YTH1_EMENI mRNA 3'-end-processing protein yth... | 188 | 1e-45 | 157 | 43 | 59 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 13 | Q4P384 | 366 | YTH1_USTMA mRNA 3'-end-processing protein YTH... | 163 | 3e-44 | 156 | 45 | 61 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 14 | Q5FVR7 | 243 | CPSF4_RAT Cleavage and polyadenylation specif... | 141 | 3e-38 | 137 | 48 | 65 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 15 | O19137 | 243 | CPSF4_BOVIN Cleavage and polyadenylation spec... | 141 | 4e-38 | 137 | 48 | 65 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 16 | O95639 | 269 | CPSF4_HUMAN Cleavage and polyadenylation spec... | 141 | 4e-38 | 138 | 48 | 65 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0046778; P:modification by virus of host mRNA processing; TAS:Reactome.::GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0019058; P:viral infectious cycle; TAS:Reactome. | 17 | Q66KE3 | 269 | CPSF4_XENTR Cleavage and polyadenylation spec... | 141 | 6e-37 | 135 | 48 | 65 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 18 | Q6DJP7 | 269 | CPSF4_XENLA Cleavage and polyadenylation spec... | 141 | 7e-37 | 135 | 48 | 65 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 19 | Q9UTD1 | 170 | YTH1_SCHPO mRNA 3'-end-processing protein yth... | 171 | 2e-36 | 130 | 39 | 57 | GO:0005829; C:cytosol; IDA:PomBase.::GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IDA:PomBase. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IC:PomBase. | 20 | P0CS64 | 332 | YTH1_CRYNJ mRNA 3'-end-processing protein YTH... | 187 | 8e-33 | 125 | 38 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 21 | P0CS65 | 332 | YTH1_CRYNB mRNA 3'-end-processing protein YTH... | 187 | 8e-33 | 125 | 38 | 50 | GO:0005634; C:nucleus; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 22 | A6NMK7 | 179 | CPS4L_HUMAN Putative cleavage and polyadenyla... | 166 | 1e-31 | 119 | 37 | 54 | | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 23 | Q8BQZ5 | 211 | CPSF4_MOUSE Cleavage and polyadenylation spec... | 110 | 7e-23 | 96.3 | 45 | 63 | GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; ISS:UniProtKB. | | | | | | | | | | GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 24 | Q0DA50 | 665 | C3H45_ORYSJ Zinc finger CCCH domain-containin... | 81 | 3e-16 | 80.9 | 46 | 63 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 25 | A9LNK9 | 631 | CPSF_ARATH Cleavage and polyadenylation speci... | 81 | 9e-16 | 79.3 | 47 | 60 | GO:0005634; C:nucleus; IDA:TAIR. | | | | | | | | | | GO:0005516; F:calmodulin binding; IDA:TAIR.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004519; F:endonuclease activity; IDA:TAIR.::GO:0003723; F:RNA binding; IDA:TAIR.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006397; P:mRNA processing; IEA:UniProtKB-KW. | 26 | Q8IXZ2 | 948 | ZC3H3_HUMAN Zinc finger CCCH domain-containin... | 136 | 0.000000000002 | 69.3 | 36 | 51 | GO:0005634; C:nucleus; IDA:UniProtKB. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB.::GO:0016973; P:poly(A)+ mRNA export from nucleus; IMP:UniProtKB.::GO:0010793; P:regulation of mRNA export from nucleus; IMP:UniProtKB. | 27 | O74823 | 377 | YBJC_SCHPO Zinc finger CCCH domain-containing... | 166 | 0.00000000006 | 63.9 | 31 | 48 | GO:0005634; C:nucleus; IDA:PomBase. | | | | | | | | | | GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 28 | Q3ED78 | 470 | C3H7_ARATH Zinc finger CCCH domain-containing... | 106 | 0.00003 | 47.8 | 31 | 47 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 29 | Q9LTS7 | 675 | C3H65_ARATH Zinc finger CCCH domain-containin... | 82 | 0.0001 | 45.8 | 35 | 51 | | | | | | | | | | | GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0004518; F:nuclease activity; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | | 30 | Q9DD48 | 423 | MKRN2_SERQU Probable E3 ubiquitin-protein lig... | 57 | 0.0005 | 43.5 | 32 | 56 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 31 | Q8JFF3 | 435 | MKRN1_SERQU Probable E3 ubiquitin-protein lig... | 64 | 0.003 | 41.2 | 34 | 50 | | | | | | | | | | | GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro. | | | | | | | | | | |