UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YPR107C

Length:

208

Number of sequences:

5887

Description:

YPR107C YTH1 SGDID:S000006311, Chr XVI from 742064-741438, Genome Release 64-1-1, reverse complement, Verified ORF, "Essential RNA-binding component of cleavage and polyadenylation factor, contains five zinc fingers; required for pre-mRNA 3'-end processing and polyadenylation"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
31	Q8JFF3	435	MKRN1_SERQU Probable E3 ubiquitin-protein lig...	64	0.003	41.2	34	50
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
32	Q9JJ48	305	ZC3H8_MOUSE Zinc finger CCCH domain-containin...	86	0.004	40.8	28	48	GO:0005634; C:nucleus; IDA:MGI.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; IDA:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; ISS:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; ISS:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; ISS:UniProtKB.::GO:0046677; P:response to antibiotic; ISS:UniProtKB.::GO:0043029; P:T cell homeostasis; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
33	Q13064	507	MKRN3_HUMAN Probable E3 ubiquitin-protein lig...	61	0.004	41.2	30	51	GO:0030529; C:ribonucleoprotein complex; TAS:ProtInc.
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
34	Q6GLD9	418	MKRN2_XENTR Probable E3 ubiquitin-protein lig...	75	0.005	40.8	28	47
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0009798; P:axis specification; ISS:BHF-UCL.::GO:0009790; P:embryo development; ISS:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; ISS:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; ISS:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; ISS:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; ISS:UniProtKB.
35	Q9H000	416	MKRN2_HUMAN Probable E3 ubiquitin-protein lig...	56	0.005	40.8	29	54	GO:0005622; C:intracellular; IDA:UniProtKB.
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
36	Q4VBT5	439	MKRN1_DANRE Probable E3 ubiquitin-protein lig...	64	0.006	40.8	28	50
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
37	Q8BYK8	1177	ZC3H6_MOUSE Zinc finger CCCH domain-containin...	84	0.009	40.4	31	50
									GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
38	Q5ZA07	368	C3H41_ORYSJ E3 ubiquitin-protein ligase makor...	52	0.009	40	31	60
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
39	Q657B3	698	C3H7_ORYSJ Zinc finger CCCH domain-containing...	86	0.011	40	33	45
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
40	Q6IDS6	323	C3H35_ARATH E3 ubiquitin-protein ligase makor...	85	0.011	39.7	27	49
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
41	Q5NU14	429	MKRN1_TAKRU Probable E3 ubiquitin-protein lig...	67	0.016	39.3	33	48
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
42	Q5NU13	402	MKRN2_TAKRU Probable E3 ubiquitin-protein lig...	57	0.018	39.3	26	56
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43	P61129	1189	ZC3H6_HUMAN Zinc finger CCCH domain-containin...	84	0.019	39.3	30	50
									GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
44	Q8N5P1	291	ZC3H8_HUMAN Zinc finger CCCH domain-containin...	86	0.021	38.5	28	48	GO:0005634; C:nucleus; ISS:UniProtKB.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0043565; F:sequence-specific DNA binding; ISS:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; IMP:UniProtKB.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006915; P:apoptotic process; IEA:UniProtKB-KW.::GO:0033085; P:negative regulation of T cell differentiation in thymus; IMP:UniProtKB.::GO:0045892; P:negative regulation of transcription, DNA-dependent; IDA:UniProtKB.::GO:0070245; P:positive regulation of thymocyte apoptotic process; IMP:UniProtKB.::GO:0046677; P:response to antibiotic; IDA:UniProtKB.::GO:0043029; P:T cell homeostasis; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45	Q4SRI6	372	MKRN1_TETNG Probable E3 ubiquitin-protein lig...	67	0.024	38.5	33	48
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
46	Q9TT91	478	MKRN1_MACEU E3 ubiquitin-protein ligase makor...	46	0.033	38.5	37	54
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
47	B0F0H3	409	MKRN2_XENLA Probable E3 ubiquitin-protein lig...	54	0.043	37.7	28	50	GO:0005622; C:intracellular; IC:UniProtKB.
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0009798; P:axis specification; IMP:BHF-UCL.::GO:0009790; P:embryo development; IMP:UniProtKB.::GO:0050768; P:negative regulation of neurogenesis; IMP:UniProtKB.::GO:0014065; P:phosphatidylinositol 3-kinase cascade; IMP:UniProtKB.::GO:0045944; P:positive regulation of transcription from RNA polymerase II promoter; IMP:UniProtKB.::GO:0043491; P:protein kinase B signaling cascade; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IDA:UniProtKB.
48	Q9ERV1	416	MKRN2_MOUSE Probable E3 ubiquitin-protein lig...	52	0.054	37.7	27	52	GO:0005622; C:intracellular; ISS:UniProtKB.
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
49	E0X9N4	350	C3H69_ARATH Zinc finger CCCH domain-containin...	55	0.18	35.8	27	51	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
50	Q5RJC5	435	C3H67_ARATH Zinc finger CCCH domain-containin...	130	0.22	35.8	27	40	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
51	Q6GLT5	408	MKRN1_XENLA Probable E3 ubiquitin-protein lig...	48	0.43	35	33	52
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
52	Q9FE91	419	C3H62_ARATH Zinc finger CCCH domain-containin...	25	0.45	34.7	44	76
									GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
53	O22243	1015	C3H31_ARATH Zinc finger CCCH domain-containin...	49	0.54	34.7	31	47	GO:0009507; C:chloroplast; IDA:TAIR.
									GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008026; F:ATP-dependent helicase activity; IEA:InterPro.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
54	P22293	1325	SUS_DROME Protein suppressor of sable OS=Dros...	55	0.56	34.7	29	51	GO:0005654; C:nucleoplasm; IDA:FlyBase.
									GO:0003723; F:RNA binding; IDA:FlyBase.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0071027; P:nuclear RNA surveillance; IMP:FlyBase.
55	A8XND8	299	MBL_CAEBR Muscleblind-like protein OS=Caenorh...	56	0.61	34.3	38	59	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
56	Q94250	324	MBL_CAEEL Muscleblind-like protein OS=Caenorh...	56	0.61	34.3	38	59	GO:0005634; C:nucleus; ISS:UniProtKB.
									GO:0003723; F:RNA binding; IEA:UniProtKB-KW.::GO:0008270; F:zinc ion binding; IEA:InterPro.
57	Q60764	544	MKRN3_MOUSE Probable E3 ubiquitin-protein lig...	31	0.66	34.3	39	68
									GO:0016874; F:ligase activity; IEA:UniProtKB-KW.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
58	Q5NDL3	535	AER61_CHICK Uncharacterized glycosyltransfera...	135	0.89	33.9	25	40	GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell.
									GO:0016757; F:transferase activity, transferring glycosyl groups; IEA:InterPro.
59	Q5ZJJ1	723	ZC11A_CHICK Zinc finger CCCH domain-containin...	72	0.93	33.9	29	49
									GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
60	Q8I5Z5	781	YPF09_PLAF7 Uncharacterized protein PFL0250w ...	124	1	33.9	27	43	GO:0005737; C:cytoplasm; NAS:UniProtKB.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
61	Q9H0J9	701	PAR12_HUMAN Poly [ADP-ribose] polymerase 12 O...	99	1.1	33.9	28	39	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003950; F:NAD+ ADP-ribosyltransferase activity; IEA:EC.::GO:0003676; F:nucleic acid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.

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