Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR088C
Length:
541
Number of sequences:
5887
Description:
YPR088C SRP54 SGDID:S000006292, Chr XVI from 713028-711403, Genome Release 64-1-1, reverse complement, Verified ORF, "Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
181P14349    648   GAG_FOAMV Gag polyprotein OS=Human spumaretro...1341.8     35     26     46GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
182P17657    302   DPY13_CAEEL Cuticle collagen dpy-13 OS=Caenor...382     34.7     50     50GO:0005581; C:collagen; IEA:UniProtKB-KW.
GO:0042302; F:structural constituent of cuticle; IEA:UniProtKB-KW.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.
183A4YF54    211   UREG_METS5 Urease accessory protein UreG OS=M...532.5     33.9     40     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0016151; F:nickel cation binding; IEA:InterPro.
184Q318P8    1128   IF2_PROM9 Translation initiation factor IF-2 ...292.7     34.7     55     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
185A5I557    590   VATA_CLOBH V-type ATP synthase alpha chain OS...972.9     34.3     28     45GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
186A7FWQ7    590   VATA_CLOB1 V-type ATP synthase alpha chain OS...972.9     34.3     28     45GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
187B1KXT6    592   VATA_CLOBM V-type ATP synthase alpha chain OS...972.9     34.3     28     45GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
188Q5LES5    202   CYSC_BACFN Adenylyl-sulfate kinase OS=Bactero...512.9     33.5     35     49
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
189A7GGL4    590   VATA_CLOBL V-type ATP synthase alpha chain OS...973.1     34.3     28     45GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
190B1IJM8    592   VATA_CLOBK V-type ATP synthase alpha chain OS...973.2     34.3     28     45GO:0033178; C:proton-transporting two-sector ATPase complex, catalytic domain; IEA:InterPro.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0006754; P:ATP biosynthetic process; IEA:UniProtKB-KW.::GO:0015991; P:ATP hydrolysis coupled proton transport; IEA:InterPro.
191A2BT70    1126   IF2_PROMS Translation initiation factor IF-2 ...173.5     34.3     71     76GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
192O67099    195   KTHY_AQUAE Thymidylate kinase OS=Aquifex aeol...323.6     33.1     47     63
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004798; F:thymidylate kinase activity; IEA:EC.
GO:0006233; P:dTDP biosynthetic process; IEA:InterPro.
193Q21122    457   F26_CAEEL Probable 6-phosphofructo-2-kinase/f...673.8     33.9     33     43
GO:0003873; F:6-phosphofructo-2-kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004331; F:fructose-2,6-bisphosphate 2-phosphatase activity; IEA:EC.
GO:0006003; P:fructose 2,6-bisphosphate metabolic process; IEA:InterPro.
194Q960T2    551   SAP47_DROME Synapse-associated protein of 47 ...434     33.9     35     51GO:0045202; C:synapse; IDA:UniProtKB.
GO:0008306; P:associative learning; IMP:FlyBase.::GO:0048172; P:regulation of short-term neuronal synaptic plasticity; IDA:FlyBase.::GO:0007268; P:synaptic transmission; NAS:UniProtKB.
195Q9QZR9    1682   CO4A4_MOUSE Collagen alpha-4(IV) chain OS=Mus...214.3     33.9     48     71GO:0005605; C:basal lamina; ISS:UniProtKB.::GO:0005587; C:collagen type IV; IDA:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.::GO:0005201; F:extracellular matrix structural constituent; IPI:UniProtKB.
GO:0032836; P:glomerular basement membrane development; IMP:MGI.
196O34577    197   CYSC1_BACSU Probable adenylyl-sulfate kinase ...464.4     33.1     35     57
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
197Q0BI00    181   CYSC_BURCM Adenylyl-sulfate kinase OS=cepacia...474.5     32.7     32     51
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
198A7H9F3    970   IF2_ANADF Translation initiation factor IF-2 ...355.6     33.5     46     60GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
199B4IAD1    260   NUBP2_DROSE Cytosolic Fe-S cluster assembly f...1595.8     33.1     25     43
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
200A2BYM0    1161   IF2_PROM5 Translation initiation factor IF-2 ...286.4     33.5     50     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
201Q4FP37    291   ATPG_PELUB ATP synthase gamma chain OS=Pelagi...876.4     32.7     32     46GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0045261; C:proton-transporting ATP synthase complex, catalytic core F(1); IEA:UniProtKB-KW.
GO:0046933; F:hydrogen ion transporting ATP synthase activity, rotational mechanism; IEA:InterPro.::GO:0046961; F:proton-transporting ATPase activity, rotational mechanism; IEA:InterPro.
GO:0015986; P:ATP synthesis coupled proton transport; IEA:InterPro.
202P53420    1690   CO4A4_HUMAN Collagen alpha-4(IV) chain OS=Hom...316.5     33.5     42     48GO:0005605; C:basal lamina; IDA:UniProtKB.::GO:0005587; C:collagen type IV; IDA:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.::GO:0005201; F:extracellular matrix structural constituent; IMP:UniProtKB.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0032836; P:glomerular basement membrane development; IMP:UniProtKB.
203B4IUH5    260   NBP21_DROYA Cytosolic Fe-S cluster assembly f...427.1     32.7     43     62
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
204B4PES4    260   NBP22_DROYA Cytosolic Fe-S cluster assembly f...427.2     32.7     43     62
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
205P08572    1712   CO4A2_HUMAN Collagen alpha-2(IV) chain OS=Hom...317.5     33.1     45     58GO:0005587; C:collagen type IV; TAS:UniProtKB.
GO:0005201; F:extracellular matrix structural constituent; TAS:UniProtKB.::GO:0005515; F:protein binding; IPI:IntAct.
GO:0001525; P:angiogenesis; IEA:UniProtKB-KW.::GO:0007411; P:axon guidance; TAS:Reactome.::GO:0030198; P:extracellular matrix organization; NAS:UniProtKB.::GO:0016525; P:negative regulation of angiogenesis; IDA:UniProtKB.
206Q920P5    562   KAD5_MOUSE Adenylate kinase isoenzyme 5 OS=Mu...357.5     33.1     49     54
GO:0004017; F:adenylate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0008603; F:cAMP-dependent protein kinase regulator activity; IEA:InterPro.
GO:0046034; P:ATP metabolic process; IEA:InterPro.::GO:0007165; P:signal transduction; IEA:InterPro.
207B3NIP2    260   NUBP2_DROER Cytosolic Fe-S cluster assembly f...427.5     32.7     43     62
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
208Q61072    845   ADAM9_MOUSE Disintegrin and metalloproteinase...517.7     33.1     37     49GO:0005737; C:cytoplasm; IDA:MGI.::GO:0005615; C:extracellular space; IMP:BHF-UCL.::GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.::GO:0031233; C:intrinsic to external side of plasma membrane; IDA:BHF-UCL.
GO:0005080; F:protein kinase C binding; IPI:BHF-UCL.::GO:0017124; F:SH3 domain binding; IDA:BHF-UCL.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0051044; P:positive regulation of membrane protein ectodomain proteolysis; IDA:BHF-UCL.::GO:0051384; P:response to glucocorticoid stimulus; IMP:BHF-UCL.::GO:0007179; P:transforming growth factor beta receptor signaling pathway; IMP:BHF-UCL.
209P11137    1827   MAP2_HUMAN Microtubule-associated protein 2 O...348     33.1     44     59GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.::GO:0005875; C:microtubule associated complex; TAS:ProtInc.
GO:0005516; F:calmodulin binding; IEA:UniProtKB-KW.::GO:0002162; F:dystroglycan binding; IPI:UniProtKB.::GO:0005198; F:structural molecule activity; NAS:ProtInc.
GO:0021954; P:central nervous system neuron development; IEP:DFLAT.::GO:0048813; P:dendrite morphogenesis; IEP:DFLAT.::GO:0007026; P:negative regulation of microtubule depolymerization; IEA:InterPro.
210P31721    253   C1QB_RAT Complement C1q subcomponent subunit ...248.1     32.3     46     67GO:0005581; C:collagen; IEA:UniProtKB-KW.::GO:0005602; C:complement component C1 complex; IDA:RGD.
GO:0007568; P:aging; IEP:RGD.::GO:0007420; P:brain development; IEP:RGD.::GO:0006958; P:complement activation, classical pathway; IEA:UniProtKB-KW.::GO:0045087; P:innate immune response; IEA:UniProtKB-KW.::GO:0051384; P:response to glucocorticoid stimulus; IEP:RGD.
211A7Z4I0    197   CYSC_BACA2 Adenylyl-sulfate kinase OS=Bacillu...468.2     32.3     35     57
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
records
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