Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR088C
Length:
541
Number of sequences:
5887
Description:
YPR088C SRP54 SGDID:S000006292, Chr XVI from 713028-711403, Genome Release 64-1-1, reverse complement, Verified ORF, "Signal recognition particle (SRP) subunit (homolog of mammalian SRP54); contains the signal sequence-binding activity of SRP, interacts with the SRP RNA, and mediates binding of SRP to signal receptor; contains GTPase domain"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
151O43032    547   SRPR_SCHPO Signal recognition particle recept...2502e-18     92     25     46GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005785; C:signal recognition particle receptor complex; ISS:PomBase.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0004872; F:receptor activity; IEA:UniProtKB-KW.::GO:0005047; F:signal recognition particle binding; ISS:PomBase.
GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IC:PomBase.
152Q56339    437   FLHF_TREPA Flagellar biosynthesis protein flh...2150.0000000000003     75.1     28     47GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
153O52908    484   FLHF_CAMJE Flagellar biosynthesis protein flh...1880.00000000001     70.9     30     46GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
154Q9ZM34    455   FLHF_HELPJ Flagellar biosynthesis protein flh...1910.00000000003     69.3     30     47GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
155O25679    459   FLHF_HELPY Flagellar biosynthesis protein flh...1910.00000000004     68.9     30     47GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
156O67266    373   FLHF_AQUAE Flagellar biosynthesis protein flh...1840.00000000004     68.2     27     46GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
157Q01960    366   FLHF_BACSU Flagellar biosynthesis protein flh...1960.000000005     62     26     47GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
158Q44758    388   FLHF_BORBU Flagellar biosynthesis protein flh...2850.00000004     59.3     23     42GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
159O52256    437   FLHF_PSEPU Flagellar biosynthesis protein flh...1820.0000003     56.6     26     45GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
160Q9I3P8    429   FLHF_PSEAE Flagellar biosynthesis protein flh...1820.000008     52     23     46GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0017111; F:nucleoside-triphosphatase activity; IEA:InterPro.
GO:0043064; P:flagellum organization; IEA:UniProtKB-KW.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
161P27177    273   PRIO_CHICK Major prion protein homolog OS=Gal...750.045     39.7     35     43GO:0031225; C:anchored to membrane; IEA:UniProtKB-KW.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005507; F:copper ion binding; ISS:UniProtKB.
GO:0051260; P:protein homooligomerization; IEA:InterPro.
162P07165    231   VIRC1_AGRT5 Protein virC1 OS=Agrobacterium tu...1050.076     38.5     29     48
GO:0003677; F:DNA binding; IGC:PAMGO_GAT.
163O28980    346   Y1289_ARCFU Putative GTPase AF_1289 OS=9628 /...1280.1     38.9     24     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
164Q12118    346   SGT2_YEAST Small glutamine-rich tetratricopep...630.15     38.1     38     48GO:0072380; C:TRC complex; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0006620; P:posttranslational protein targeting to membrane; IDA:SGD.::GO:0009408; P:response to heat; IMP:SGD.
165A1U3X8    199   CYSC_MARAV Adenylyl-sulfate kinase OS=(Marino...520.27     37     37     50
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
166Q7VE24    201   CYSC_PROMA Adenylyl-sulfate kinase OS=Prochlo...680.35     36.6     34     51
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
167Q9K7H6    208   CYSC2_BACHD Probable adenylyl-sulfate kinase ...440.56     35.8     39     55
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
168Q02388    2944   CO7A1_HUMAN Collagen alpha-1(VII) chain OS=Ho...740.83     36.6     32     43GO:0005604; C:basement membrane; TAS:ProtInc.::GO:0005590; C:collagen type VII; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0004867; F:serine-type endopeptidase inhibitor activity; IEA:UniProtKB-KW.
GO:0007155; P:cell adhesion; IEA:UniProtKB-KW.::GO:0008544; P:epidermis development; TAS:ProtInc.
169Q54EQ9    919   Y1586_DICDI Putative uncharacterized protein ...750.87     36.2     31     45
170A8G6Z5    1119   IF2_PROM2 Translation initiation factor IF-2 ...370.88     36.2     51     59GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
171C6A187    193   KCY_THESM Cytidylate kinase OS=Thermococcus s...370.91     35     43     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0004127; F:cytidylate kinase activity; IEA:InterPro.
172P63578    334   Y1533_MYCBO Probable GTPase Mb1533 OS=Mycobac...1681.2     35.4     21     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
173P63577    334   Y1496_MYCTU Probable GTPase Rv1496/MT1543 OS=...1681.2     35.4     21     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.
174Q76NZ7    265   NUBP2_DICDI Cytosolic Fe-S cluster assembly f...411.2     35     44     63
GO:0051539; F:4 iron, 4 sulfur cluster binding; IEA:UniProtKB-KW.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
175Q9YCR6    183   CYSC_AERPE Probable adenylyl-sulfate kinase O...391.4     34.7     41     59
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
176P12105    1262   CO3A1_CHICK Collagen alpha-1(III) chain OS=Ga...441.4     35.4     41     50GO:0005581; C:collagen; IEA:UniProtKB-KW.
GO:0005201; F:extracellular matrix structural constituent; IEA:InterPro.
177Q7MPF0    207   CYSC_VIBVY Adenylyl-sulfate kinase OS=Vibrio ...521.6     34.7     33     52
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
178Q8DE75    207   CYSC_VIBVU Adenylyl-sulfate kinase OS=Vibrio ...521.6     34.7     33     52
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
179B9LKC1    186   CYSC_CHLSY Adenylyl-sulfate kinase OS=Chlorof...471.6     34.3     34     49
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
180Q64VR1    202   CYSC_BACFR Adenylyl-sulfate kinase OS=Bactero...701.8     34.3     31     44
GO:0004020; F:adenylylsulfate kinase activity; IEA:EC.::GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
GO:0000103; P:sulfate assimilation; IEA:InterPro.
181P14349    648   GAG_FOAMV Gag polyprotein OS=Human spumaretro...1341.8     35     26     46GO:0030430; C:host cell cytoplasm; IEA:UniProtKB-SubCell.::GO:0042025; C:host cell nucleus; IEA:UniProtKB-SubCell.::GO:0019028; C:viral capsid; IEA:UniProtKB-KW.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.
records
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