UniProt_SwissProt BLAST: Single locus

Species:

Saccharomyces cerevisiae S288C

Locus:

YPR086W

Length:

345

Number of sequences:

5887

Description:

YPR086W SUA7 SGDID:S000006290, Chr XVI from 710101-711138, Genome Release 64-1-1, Verified ORF, "Transcription factor TFIIB, a general transcription factor required for transcription initiation and start site selection by RNA polymerase II"

rec.	Subject	Hit Length	Description	Align.Len	E value	Bit score	% ident.	% pos.	GO associations
1	P29055	345	TF2B_YEAST Transcription initiation factor II...	345	0	712	100	100	GO:0005634; C:nucleus; IDA:SGD.
									GO:0001139; F:core RNA polymerase II recruiting transcription factor activity; IDA:SGD.::GO:0000993; F:RNA polymerase II core binding; IDA:SGD.::GO:0017025; F:TBP-class protein binding; IDA:SGD.::GO:0001129; F:TBP-class protein binding RNA polymerase II transcription factor activity involved in preinitiation complex assembly; IDA:SGD.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:2000679; P:positive regulation of transcription regulatory region DNA binding; IDA:SGD.::GO:0001113; P:transcriptional open complex formation at RNA polymerase II promoter; IMP:SGD.::GO:0001174; P:transcriptional start site selection at RNA polymerase II promoter; IMP:SGD.
2	Q05959	357	TF2B_KLULA Transcription initiation factor II...	332	2e-177	503	70	85	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
3	O13749	340	TF2B_SCHPO Transcription initiation factor II...	330	3e-80	254	40	59	GO:0005634; C:nucleus; IDA:PomBase.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; IDA:PomBase.
4	Q54FD6	325	TF2B_DICDI Transcription initiation factor II...	303	8e-63	209	37	57	GO:0005654; C:nucleoplasm; ISS:dictyBase.
									GO:0001139; F:core RNA polymerase II recruiting transcription factor activity; ISS:dictyBase.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.
5	P29054	316	TF2B_XENLA Transcription initiation factor II...	298	6e-55	188	36	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
6	P29052	315	TF2B_DROME Transcription initiation factor II...	298	7e-54	185	36	55	GO:0005667; C:transcription factor complex; ISS:FlyBase.
									GO:0008134; F:transcription factor binding; IPI:FlyBase.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0051101; P:regulation of DNA binding; IDA:FlyBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IDA:FlyBase.::GO:0001174; P:transcriptional start site selection at RNA polymerase II promoter; IDA:FlyBase.
7	P62916	316	TF2B_RAT Transcription initiation factor IIB ...	298	3e-53	184	36	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
8	P62915	316	TF2B_MOUSE Transcription initiation factor II...	298	3e-53	184	36	56	GO:0005634; C:nucleus; IDA:MGI.
									GO:0003677; F:DNA binding; IDA:MGI.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
9	Q5R886	316	TF2B_PONAB Transcription initiation factor II...	298	3e-53	184	36	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
10	Q4R3J5	316	TF2B_MACFA Transcription initiation factor II...	298	3e-53	184	36	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
11	Q00403	316	TF2B_HUMAN Transcription initiation factor II...	298	3e-53	184	36	56	GO:0005654; C:nucleoplasm; TAS:Reactome.
									GO:0046966; F:thyroid hormone receptor binding; IPI:UniProtKB.::GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0044419; P:interspecies interaction between organisms; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome.
12	Q2KIN8	316	TF2B_BOVIN Transcription initiation factor II...	298	7e-53	182	36	56	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
13	O16991	306	TF2B_CAEEL Transcription initiation factor II...	296	5e-49	172	35	55	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
14	Q8SRP3	312	TF2B_ENCCU Transcription initiation factor II...	326	8e-44	159	34	50	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
15	Q9SS44	312	TF2B2_ARATH Transcription initiation factor I...	304	4e-39	146	34	50	GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
16	Q8W0W3	312	TF2B_ORYSJ Transcription initiation factor II...	306	9e-39	145	33	50	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
17	P48512	312	TF2B1_ARATH Transcription initiation factor I...	304	9e-39	145	33	50	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
18	P48513	313	TF2B_SOYBN Transcription initiation factor II...	304	4e-38	143	34	49	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
19	Q9NHP7	293	TF2B_DROVI Transcription initiation factor II...	315	3e-36	138	30	47	GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
20	O28970	326	TF2B_ARCFU Transcription initiation factor II...	308	8e-34	132	30	47
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
21	A5UKA1	310	TF2B_METS3 Transcription initiation factor II...	306	4e-31	124	30	45
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
22	Q9HRE6	325	TF2B2_HALSA Transcription initiation factor I...	308	2e-30	122	28	48
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
23	Q9HJM7	312	TF2B1_THEAC Transcription initiation factor I...	310	1e-29	120	28	43
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
24	Q2NEL6	311	TF2B_METST Transcription initiation factor II...	308	2e-29	119	29	44
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
25	O26971	310	TF2B_METTH Transcription initiation factor II...	308	2e-29	119	29	44
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
26	Q979Q3	312	TF2B1_THEVO Transcription initiation factor I...	310	3e-29	119	28	43
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
27	A6UW60	334	TF2B_META3 Transcription initiation factor II...	310	4e-29	119	29	46
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
28	B8GJQ9	334	TF2B_METPE Transcription initiation factor II...	308	4e-29	119	29	47
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
29	A3CSQ6	337	TF2B_METMJ Transcription initiation factor II...	308	2e-28	117	29	47
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
30	A9A8Q0	339	TF2B_METM6 Transcription initiation factor II...	310	2e-28	117	29	45
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.
31	Q6M176	339	TF2B_METMP Transcription initiation factor II...	310	2e-28	117	29	45
									GO:0003743; F:translation initiation factor activity; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
									GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006352; P:transcription initiation, DNA-dependent; IEA:InterPro.

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