Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR072W
Length:
560
Number of sequences:
5887
Description:
YPR072W NOT5 SGDID:S000006276, Chr XVI from 690107-691789, Genome Release 64-1-1, Verified ORF, "Subunit of the CCR4-NOT complex, which is a global transcriptional regulator with roles in transcription initiation and elongation and in mRNA degradation"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12514    560   NOT5_YEAST General negative regulator of tran...5600     1150     100     100GO:0030015; C:CCR4-NOT core complex; IPI:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0031087; P:deadenylation-independent decapping of nuclear-transcribed mRNA; IMP:SGD.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.
2P06102    836   NOT3_YEAST General negative regulator of tran...3179e-42     164     36     57GO:0030015; C:CCR4-NOT core complex; IPI:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
3O13870    640   NOT3_SCHPO General negative regulator of tran...1790.000000005     62.8     27     44GO:0030015; C:CCR4-NOT core complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
4Q8K0V4    751   CNOT3_MOUSE CCR4-NOT transcription complex su...860.00004     50.4     33     56GO:0000932; C:cytoplasmic mRNA processing body; IDA:UniProtKB.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
5O75175    753   CNOT3_HUMAN CCR4-NOT transcription complex su...850.00004     50.4     33     56GO:0000932; C:cytoplasmic mRNA processing body; ISS:UniProtKB.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
6Q52JK6    603   VIP2_NICBE Probable NOT transcription complex...470.0001     48.5     45     60GO:0005634; C:nucleus; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0015074; P:DNA integration; IMP:UniProtKB.::GO:0006355; P:regulation of transcription, DNA-dependent; ISS:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7Q9NZN8    540   CNOT2_HUMAN CCR4-NOT transcription complex su...860.0003     47     34     52GO:0005829; C:cytosol; TAS:Reactome.::GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0001104; F:RNA polymerase II transcription cofactor activity; TAS:UniProtKB.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; TAS:Reactome.
8Q8C5L3    540   CNOT2_MOUSE CCR4-NOT transcription complex su...860.0004     47     34     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
9P06100    191   NOT2_YEAST General negative regulator of tran...790.0006     44.7     35     57GO:0030015; C:CCR4-NOT core complex; IPI:SGD.::GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005634; C:nucleus; IDA:SGD.
GO:0031087; P:deadenylation-independent decapping of nuclear-transcribed mRNA; IMP:SGD.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; TAS:SGD.::GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; IDA:SGD.::GO:0032968; P:positive regulation of transcription elongation from RNA polymerase II promoter; IDA:SGD.::GO:0016567; P:protein ubiquitination; IMP:SGD.::GO:0051726; P:regulation of cell cycle; IMP:SGD.::GO:0000749; P:response to pheromone involved in conjugation with cellular fusion; IMP:SGD.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; IMP:SGD.
10Q94547    585   RGA_DROME Regulator of gene activity OS=Droso...820.028     40.8     33     50GO:0030014; C:CCR4-NOT complex; IDA:FlyBase.::GO:0005737; C:cytoplasm; IDA:FlyBase.::GO:0005634; C:nucleus; NAS:UniProtKB.
GO:0007095; P:mitotic cell cycle G2/M transition DNA damage checkpoint; IGI:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.
11P87240    306   NOT2_SCHPO General negative regulator of tran...490.036     40     45     63GO:0030015; C:CCR4-NOT core complex; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0000289; P:nuclear-transcribed mRNA poly(A) tail shortening; ISS:PomBase.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; ISS:PomBase.::GO:0006354; P:transcription elongation, DNA-dependent; IC:PomBase.
12Q9FPW4    614   VIP2_ARATH Probable NOT transcription complex...520.063     39.7     35     54GO:0005634; C:nucleus; IDA:TAIR.
GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0015074; P:DNA integration; IMP:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
13Q2EG98    2201   PK1L3_MOUSE Polycystic kidney disease protein...2061.7     35.4     24     39GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0005509; F:calcium ion binding; IEA:InterPro.::GO:0005216; F:ion channel activity; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:BHF-UCL.
GO:0006812; P:cation transport; IDA:BHF-UCL.::GO:0071468; P:cellular response to acidity; IDA:BHF-UCL.::GO:0001581; P:detection of chemical stimulus involved in sensory perception of sour taste; IDA:BHF-UCL.::GO:0007218; P:neuropeptide signaling pathway; IEA:InterPro.
14Q04XD2    380   AROC_LEPBL Chorismate synthase OS=Leptospira ...1311.9     34.7     23     40
GO:0004107; F:chorismate synthase activity; IEA:EC.
GO:0009073; P:aromatic amino acid family biosynthetic process; IEA:UniProtKB-KW.
15Q04W40    380   AROC_LEPBJ Chorismate synthase OS=Leptospira ...1311.9     34.7     23     40
GO:0004107; F:chorismate synthase activity; IEA:EC.
GO:0009073; P:aromatic amino acid family biosynthetic process; IEA:UniProtKB-KW.
16A4W8U3    1482   MUKB_ENT38 Chromosome partition protein MukB ...602.8     34.7     37     60GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0009295; C:nucleoid; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
17Q498J9    233   MBLC1_XENLA Metallo-beta-lactamase domain-con...543.1     33.9     33     54
GO:0016787; F:hydrolase activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
18A8AIF5    1489   MUKB_CITK8 Chromosome partition protein MukB ...684.1     34.3     34     56GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0009295; C:nucleoid; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
19O08532    1103   CA2D1_MOUSE Voltage-dependent calcium channel...698.3     33.1     30     55GO:0016529; C:sarcoplasmic reticulum; IDA:MGI.::GO:0030315; C:T-tubule; IDA:MGI.
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:MGI.
20B5XY73    1482   MUKB_KLEP3 Chromosome partition protein MukB ...688.4     33.1     34     56GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0009295; C:nucleoid; IEA:UniProtKB-SubCell.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0030261; P:chromosome condensation; IEA:UniProtKB-KW.::GO:0007059; P:chromosome segregation; IEA:UniProtKB-KW.
21Q5N664    254   THF1_SYNP6 Protein thf1 OS=(Anacystis nidulan...879     32.3     28     44GO:0009523; C:photosystem II; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:InterPro.::GO:0010027; P:thylakoid membrane organization; IEA:InterPro.
22Q31MY4    254   THF1_SYNE7 Protein thf1 OS=Synechococcus elon...879     32.3     28     44GO:0009523; C:photosystem II; IEA:InterPro.
GO:0015979; P:photosynthesis; IEA:InterPro.::GO:0010027; P:thylakoid membrane organization; IEA:InterPro.
23Q8WX93    1383   PALLD_HUMAN Palladin OS=Homo sapiens (Human)....879.6     33.1     28     47GO:0005884; C:actin filament; IDA:HGNC.::GO:0005925; C:focal adhesion; IEA:UniProtKB-SubCell.::GO:0030027; C:lamellipodium; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:HGNC.::GO:0001726; C:ruffle; IEA:UniProtKB-SubCell.::GO:0030018; C:Z disc; IEA:UniProtKB-SubCell.
GO:0003779; F:actin binding; IEA:UniProtKB-KW.::GO:0051371; F:muscle alpha-actinin binding; TAS:HGNC.
GO:0007010; P:cytoskeleton organization; NAS:HGNC.
24P54290    1091   CA2D1_RAT Voltage-dependent calcium channel s...699.9     32.7     30     55
GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0005245; F:voltage-gated calcium channel activity; IMP:RGD.
records
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