Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR065W
Length:
368
Number of sequences:
5887
Description:
YPR065W ROX1 SGDID:S000006269, Chr XVI from 679693-680799, Genome Release 64-1-1, Verified ORF, "Heme-dependent repressor of hypoxic genes; contains an HMG domain that is responsible for DNA bending activity"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
271O54941    411   SMCE1_MOUSE SWI/SNF-related matrix-associated...712.1     33.9     32     48GO:0071565; C:nBAF complex; IDA:UniProtKB.::GO:0071564; C:npBAF complex; IDA:UniProtKB.::GO:0005625; C:soluble fraction; IDA:MGI.::GO:0016514; C:SWI/SNF complex; IDA:MGI.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
272P40625    99   HMG_TETPY High mobility group protein OS=Tetr...672.3     32     30     57GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
273Q04678    706   SSRP1_CHICK FACT complex subunit SSRP1 OS=Gal...402.9     33.9     35     55GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
274Q4G0P3    5121   HYDIN_HUMAN Hydrocephalus-inducing protein ho...603.5     33.5     30     65
275P40619    144   HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil...693.6     32.3     30     54GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
276Q8LDF9    241   HMGB7_ARATH High mobility group B protein 7 O...783.9     32.7     31     46GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IDA:TAIR.
277Q9V5L3    589   C49A1_DROME Probable cytochrome P450 49a1 OS=...324.1     33.1     50     72GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005792; C:microsome; IEA:UniProtKB-SubCell.
GO:0009055; F:electron carrier activity; IEA:InterPro.::GO:0020037; F:heme binding; IEA:InterPro.::GO:0004497; F:monooxygenase activity; IEA:UniProtKB-KW.::GO:0016705; F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; IEA:InterPro.
278Q4H2R2    704   SSRP1_CIOIN FACT complex subunit SSRP1 OS=Cio...814.7     33.1     26     52GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
279Q9W602    693   SSRP1_XENLA FACT complex subunit SSRP1 OS=Xen...804.7     33.1     29     50GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
280Q9HG13    257   MATA2_KLULA Mating-type protein A2 OS=1267 / ...835.5     32.3     29     47GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
281P53040    516   TAF6_YEAST Transcription initiation factor TF...695.8     32.7     33     42GO:0000124; C:SAGA complex; IDA:SGD.::GO:0046695; C:SLIK (SAGA-like) complex; IDA:SGD.::GO:0005669; C:transcription factor TFIID complex; IDA:SGD.
GO:0003682; F:chromatin binding; IDA:SGD.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0042802; F:identical protein binding; IPI:IntAct.::GO:0032947; F:protein complex scaffold; IMP:SGD.::GO:0001102; F:RNA polymerase II activating transcription factor binding; IDA:SGD.
GO:0016573; P:histone acetylation; IDA:SGD.::GO:0051090; P:regulation of sequence-specific DNA binding transcription factor activity; IEA:InterPro.::GO:0051123; P:RNA polymerase II transcriptional preinitiation complex assembly; IMP:SGD.
282Q8SX83    5560   SPEN_DROME Protein split ends OS=Drosophila m...647.5     32.7     27     64GO:0005634; C:nucleus; IDA:UniProtKB.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007411; P:axon guidance; IMP:UniProtKB.::GO:0007173; P:epidermal growth factor receptor signaling pathway; IMP:UniProtKB.::GO:0048106; P:establishment of thoracic bristle planar orientation; IMP:FlyBase.::GO:0007403; P:glial cell fate determination; IMP:UniProtKB.::GO:0008586; P:imaginal disc-derived wing vein morphogenesis; IMP:FlyBase.::GO:0035321; P:maintenance of imaginal disc-derived wing hair orientation; IMP:FlyBase.::GO:0007400; P:neuroblast fate determination; IMP:UniProtKB.::GO:0007422; P:peripheral nervous system development; IMP:FlyBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IMP:UniProtKB.::GO:0007379; P:segment specification; IMP:UniProtKB.::GO:0006351; P:transcription, DNA-dependent; IMP:UniProtKB.::GO:0016055; P:Wnt receptor signaling pathway; IMP:UniProtKB.
283P07746    204   HMGT_ONCMY High mobility group-T protein OS=O...727.8     31.6     29     50GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
284A2VD00    1424   EIF3A_XENLA Eukaryotic translation initiation...688.3     32.3     35     65GO:0005852; C:eukaryotic translation initiation factor 3 complex; ISS:UniProtKB.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0001732; P:formation of translation initiation complex; ISS:UniProtKB.
285Q32L68    317   HM20B_BOVIN SWI/SNF-related matrix-associated...408.7     32     33     65GO:0005694; C:chromosome; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0016568; P:chromatin modification; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
286Q17330    712   SEM1A_CAEEL Semaphorin-1A OS=Caenorhabditis e...809.8     32     33     46GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
GO:0004872; F:receptor activity; IEA:InterPro.
GO:0030154; P:cell differentiation; IEA:UniProtKB-KW.::GO:0007399; P:nervous system development; IEA:UniProtKB-KW.
287Q62247    57   SOX16_MOUSE Protein SOX-16 OS=Mus musculus (M...219.9     29.6     57     71GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
records
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