rec. | Subject | Hit Length | Description | Align.Len | E value | Bit score | % ident. | % pos. | GO associations |
1 | Q12004 | 338 | TFB4_YEAST RNA polymerase II transcription fa... | 338 | 0 | 696 | 100 | 100 | GO:0000439; C:core TFIIH complex; IDA:SGD.::GO:0005675; C:holo TFIIH complex; IDA:SGD.::GO:0000112; C:nucleotide-excision repair factor 3 complex; IPI:SGD. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; IMP:SGD.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:SGD.::GO:0006366; P:transcription from RNA polymerase II promoter; IDA:SGD. | 2 | Q6FWA7 | 335 | TFB4_CANGA RNA polymerase II transcription fa... | 318 | 3e-168 | 479 | 70 | 84 | GO:0000439; C:core TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 3 | Q75B93 | 341 | TFB4_ASHGO RNA polymerase II transcription fa... | 329 | 4e-168 | 479 | 68 | 83 | GO:0000439; C:core TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 4 | Q6CVX9 | 337 | TFB4_KLULA RNA polymerase II transcription fa... | 343 | 3e-148 | 428 | 60 | 77 | GO:0000439; C:core TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 5 | Q6BL86 | 387 | TFB4_DEBHA RNA polymerase II transcription fa... | 383 | 1e-88 | 277 | 39 | 61 | GO:0000439; C:core TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 6 | Q6CD24 | 340 | TFB4_YARLI RNA polymerase II transcription fa... | 341 | 8e-76 | 243 | 38 | 60 | GO:0000439; C:core TFIIH complex; IEA:InterPro. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW. | 7 | O74366 | 297 | TFB4_SCHPO RNA polymerase II transcription fa... | 293 | 1e-59 | 199 | 36 | 59 | GO:0000439; C:core TFIIH complex; IEA:InterPro.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0005675; C:holo TFIIH complex; ISS:PomBase. | | | | | | | | | | GO:0000991; F:core RNA polymerase II binding transcription factor activity; ISS:PomBase.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006289; P:nucleotide-excision repair; ISS:PomBase.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:PomBase. | 8 | Q13889 | 308 | TF2H3_HUMAN General transcription factor IIH ... | 296 | 1e-36 | 139 | 30 | 50 | GO:0000439; C:core TFIIH complex; IEA:InterPro.::GO:0005675; C:holo TFIIH complex; IDA:UniProtKB. | | | | | | | | | | GO:0003684; F:damaged DNA binding; NAS:UniProtKB.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.::GO:0047485; F:protein N-terminus binding; IPI:UniProtKB.::GO:0003700; F:sequence-specific DNA binding transcription factor activity; NAS:UniProtKB.::GO:0008135; F:translation factor activity, nucleic acid binding; TAS:ProtInc. | | | | | | | | | | GO:0006370; P:mRNA capping; TAS:Reactome.::GO:0000718; P:nucleotide-excision repair, DNA damage removal; TAS:Reactome.::GO:0050434; P:positive regulation of viral transcription; TAS:Reactome.::GO:0006468; P:protein phosphorylation; IDA:GOC.::GO:0006363; P:termination of RNA polymerase I transcription; TAS:Reactome.::GO:0006362; P:transcription elongation from RNA polymerase I promoter; TAS:Reactome.::GO:0006368; P:transcription elongation from RNA polymerase II promoter; TAS:Reactome.::GO:0006361; P:transcription initiation from RNA polymerase I promoter; TAS:Reactome.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome.::GO:0006283; P:transcription-coupled nucleotide-excision repair; TAS:Reactome.::GO:0016032; P:viral reproduction; TAS:Reactome. | 9 | Q05B56 | 309 | TF2H3_BOVIN General transcription factor IIH ... | 300 | 1e-36 | 139 | 31 | 50 | GO:0000439; C:core TFIIH complex; IEA:InterPro.::GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 10 | Q561R7 | 309 | TF2H3_RAT General transcription factor IIH su... | 302 | 1e-34 | 133 | 30 | 48 | GO:0000439; C:core TFIIH complex; IEA:InterPro.::GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 11 | Q8VD76 | 309 | TF2H3_MOUSE General transcription factor IIH ... | 302 | 9e-34 | 131 | 29 | 48 | GO:0000439; C:core TFIIH complex; IEA:InterPro.::GO:0005675; C:holo TFIIH complex; ISS:UniProtKB. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006366; P:transcription from RNA polymerase II promoter; ISS:UniProtKB. | 12 | Q86IB5 | 372 | TF2H3_DICDI General transcription factor IIH ... | 261 | 1e-28 | 118 | 33 | 53 | GO:0000439; C:core TFIIH complex; IEA:InterPro.::GO:0005675; C:holo TFIIH complex; ISS:dictyBase. | | | | | | | | | | GO:0046872; F:metal ion binding; IEA:UniProtKB-KW. | | | | | | | | | | GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0007070; P:negative regulation of transcription from RNA polymerase II promoter during mitosis; ISS:dictyBase.::GO:0006367; P:transcription initiation from RNA polymerase II promoter; ISS:dictyBase. | 13 | P57823 | 494 | AMPA_PASMU Probable cytosol aminopeptidase OS... | 132 | 0.16 | 37.4 | 30 | 48 | GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell. | | | | | | | | | | GO:0004177; F:aminopeptidase activity; IEA:UniProtKB-KW.::GO:0030145; F:manganese ion binding; IEA:InterPro.::GO:0008235; F:metalloexopeptidase activity; IEA:InterPro. | | | | | | | | | | GO:0006508; P:proteolysis; IEA:UniProtKB-KW. | 14 | Q6ZWJ8 | 1503 | KCP_HUMAN Kielin/chordin-like protein OS=Homo... | 48 | 1.9 | 34.3 | 42 | 50 | GO:0005576; C:extracellular region; IEA:UniProtKB-SubCell. | | | | | | | | | | | | | | | | | | | | | 15 | Q3U492 | 1550 | KCP_MOUSE Kielin/chordin-like protein OS=Mus ... | 46 | 3.3 | 33.5 | 46 | 50 | GO:0005615; C:extracellular space; IDA:MGI. | | | | | | | | | | GO:0005515; F:protein binding; IPI:MGI. | | | | | | | | | | GO:0030513; P:positive regulation of BMP signaling pathway; IDA:MGI. |