Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR042C
Length:
1075
Number of sequences:
5887
Description:
YPR042C PUF2 SGDID:S000006246, Chr XVI from 653662-650435, Genome Release 64-1-1, reverse complement, Verified ORF, "Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12221    1075   PUF2_YEAST mRNA-binding protein PUF2 OS=Sacch...10750     2178     100     100GO:0005737; C:cytoplasm; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IGI:SGD.
2P47135    1091   JSN1_YEAST Protein JSN1 OS=Saccharomyces cere...11030     762     45     60GO:0032473; C:external side of mitochondrial outer membrane; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0034629; P:cellular protein complex localization; IMP:SGD.::GO:0051654; P:establishment of mitochondrion localization; IMP:SGD.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IGI:SGD.
3O60059    661   YG58_SCHPO Pumilio domain-containing protein ...5503e-74     264     33     52GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.::GO:0000166; F:nucleotide binding; IEA:InterPro.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
4Q07807    879   PUF3_YEAST mRNA-binding protein PUF3 OS=Sacch...2190.000000000000003     84.3     29     46GO:0032473; C:external side of mitochondrial outer membrane; IDA:SGD.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:SGD.
GO:0009060; P:aerobic respiration; IMP:SGD.::GO:0008298; P:intracellular mRNA localization; IMP:SGD.::GO:0051646; P:mitochondrion localization; IMP:SGD.::GO:0007005; P:mitochondrion organization; IMP:SGD.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IMP:SGD.
5P39016    859   MPT5_YEAST Suppressor protein MPT5 OS=Sacchar...3960.000000000001     75.9     24     41GO:0005737; C:cytoplasm; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.::GO:0030674; F:protein binding, bridging; IPI:SGD.
GO:0045947; P:negative regulation of translational initiation; IPI:SGD.::GO:1900153; P:positive regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IDA:SGD.
6Q9C5E7    861   PUM6_ARATH Pumilio homolog 6, chloroplastic O...3060.000000000007     73.6     24     43GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
7Q92359    681   YDHE_SCHPO Pumilio domain-containing protein ...3200.00000000007     70.1     23     43GO:0005829; C:cytosol; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
8Q9LP21    528   PUM10_ARATH Putative pumilio homolog 10 OS=Ar...1630.000000001     65.9     29     51GO:0005737; C:cytoplasm; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
9Q9LDW3    556   PUM11_ARATH Pumilio homolog 11 OS=Arabidopsis...2050.000000002     64.7     32     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
10Q9SS47    1003   PUM4_ARATH Pumilio homolog 4 OS=Arabidopsis t...2140.0000002     58.9     25     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
11Q9ZW02    964   PUM3_ARATH Pumilio homolog 3 OS=Arabidopsis t...2690.0000003     58.5     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
12Q9ZW06    972   PUM2_ARATH Pumilio homolog 2 OS=Arabidopsis t...2570.0002     49.3     21     40GO:0005829; C:cytosol; IDA:TAIR.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
13Q8TB72    1066   PUM2_HUMAN Pumilio homolog 2 OS=Homo sapiens ...1940.0002     49.3     23     42GO:0010494; C:cytoplasmic stress granule; ISS:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; IDA:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
14Q80U58    1066   PUM2_MOUSE Pumilio homolog 2 OS=Mus musculus ...1940.0003     48.9     23     42GO:0010494; C:cytoplasmic stress granule; IDA:UniProtKB.::GO:0048471; C:perinuclear region of cytoplasm; ISS:UniProtKB.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0003723; F:RNA binding; IDA:MGI.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.::GO:0034063; P:stress granule assembly; IDA:MGI.
15Q9C9R6    650   PUM7_ARATH Putative pumilio homolog 7, chloro...2390.0003     48.5     23     46GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IPI:TAIR.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
16Q09829    780   YAD3_SCHPO Pumilio domain-containing protein ...1880.001     46.6     27     41GO:0005794; C:Golgi apparatus; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
17Q9P789    1060   YN8E_SCHPO Pumilio domain-containing protein ...640.004     45.1     39     58GO:0005829; C:cytosol; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
18P25339    888   PUF4_YEAST Pumilio homology domain family mem...1260.006     44.3     25     47GO:0005737; C:cytoplasm; IDA:SGD.
GO:0003729; F:mRNA binding; IDA:SGD.
GO:0001308; P:negative regulation of chromatin silencing involved in replicative cell aging; IGI:SGD.::GO:0017148; P:negative regulation of translation; IDA:SGD.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; IGI:SGD.::GO:0008104; P:protein localization; IMP:SGD.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
19Q9LJX4    961   PUM5_ARATH Pumilio homolog 5 OS=Arabidopsis t...1320.019     42.7     24     44GO:0005829; C:cytosol; IDA:TAIR.::GO:0005773; C:vacuole; IDA:TAIR.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
20Q1PFN9    564   PUM9_ARATH Pumilio homolog 9 OS=Arabidopsis t...1640.052     41.2     24     43GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
21P25822    1533   PUM_DROME Maternal protein pumilio OS=Drosoph...1430.066     41.2     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003730; F:mRNA 3'-UTR binding; TAS:FlyBase.::GO:0000900; F:translation repressor activity, nucleic acid binding; TAS:FlyBase.
GO:0008595; P:anterior/posterior axis specification, embryo; TAS:FlyBase.::GO:0001709; P:cell fate determination; TAS:FlyBase.::GO:0048813; P:dendrite morphogenesis; IMP:FlyBase.::GO:0042078; P:germ-line stem cell division; NAS:FlyBase.::GO:0008258; P:head involution; IMP:FlyBase.::GO:0007616; P:long-term memory; IMP:FlyBase.::GO:0007067; P:mitosis; TAS:FlyBase.::GO:0045786; P:negative regulation of cell cycle; TAS:FlyBase.::GO:0045892; P:negative regulation of transcription, DNA-dependent; TAS:FlyBase.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; TAS:FlyBase.::GO:0048477; P:oogenesis; TAS:FlyBase.::GO:0007280; P:pole cell migration; TAS:FlyBase.::GO:0045727; P:positive regulation of translation; TAS:FlyBase.::GO:0008582; P:regulation of synaptic growth at neuromuscular junction; IDA:FlyBase.::GO:0050804; P:regulation of synaptic transmission; IMP:FlyBase.
22Q7SZT7    400   ELAV4_XENLA ELAV-like protein 4 OS=Xenopus la...1210.34     38.5     27     45GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
23A4QNI8    400   ELAV4_XENTR ELAV-like protein 4 OS=Xenopus tr...1210.35     38.1     27     45GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.
24O94462    732   PUF3_SCHPO mRNA-binding protein puf3 OS=Schiz...1050.36     38.5     27     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005741; C:mitochondrial outer membrane; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0033554; P:cellular response to stress; IEP:PomBase.::GO:0000288; P:nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay; ISS:PomBase.
25O09032    373   ELAV4_RAT ELAV-like protein 4 OS=Rattus norve...1210.66     37.4     27     45
GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
26Q61701    385   ELAV4_MOUSE ELAV-like protein 4 OS=Mus muscul...1210.75     37.4     27     45
GO:0017091; F:AU-rich element binding; ISS:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.
27P26378    380   ELAV4_HUMAN ELAV-like protein 4 OS=Homo sapie...1210.76     37.4     27     45
GO:0017091; F:AU-rich element binding; IDA:UniProtKB.::GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; TAS:ProtInc.
28Q80U78    1189   PUM1_MOUSE Pumilio homolog 1 OS=Mus musculus ...1360.92     37.4     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
29Q2VB19    1189   PUM1_CHICK Pumilio homolog 1 OS=Gallus gallus...1360.92     37.4     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
30B3M3R5    597   SHEP_DROAN Protein alan shepard OS=Drosophila...610.95     37     31     51
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009629; P:response to gravity; ISS:UniProtKB.
31Q14671    1186   PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens ...1320.96     37.4     22     42GO:0005829; C:cytosol; TAS:Reactome.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
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