Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR042C
Length:
1075
Number of sequences:
5887
Description:
YPR042C PUF2 SGDID:S000006246, Chr XVI from 653662-650435, Genome Release 64-1-1, reverse complement, Verified ORF, "Member of the PUF protein family, which is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding membrane-associated proteins"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q14671    1186   PUM1_HUMAN Pumilio homolog 1 OS=Homo sapiens ...1320.96     37.4     22     42GO:0005829; C:cytosol; TAS:Reactome.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0016044; P:cellular membrane organization; TAS:Reactome.::GO:0006892; P:post-Golgi vesicle-mediated transport; TAS:Reactome.::GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
32Q5R5X3    1186   PUM1_PONAB Pumilio homolog 1 OS=Pongo abelii ...1321     37.4     22     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
33Q9FMH4    527   PUM13_ARATH Putative pumilio homolog 13 OS=Ar...1161     37     27     49GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
34Q9LVC3    596   PUM12_ARATH Pumilio homolog 12 OS=Arabidopsis...901.1     37     28     48GO:0005737; C:cytoplasm; IDA:TAIR.::GO:0005634; C:nucleus; IDA:TAIR.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
35Q9ZW07    968   PUM1_ARATH Pumilio homolog 1 OS=Arabidopsis t...1081.3     37     29     48GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003729; F:mRNA binding; IDA:UniProtKB.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
36Q9C8B8    332   PUM17_ARATH Putative pumilio homolog 17 OS=Ar...1421.6     36.2     24     42GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
37O74968    249   RU1A_SCHPO U1 small nuclear ribonucleoprotein...912     35.4     29     47GO:0005730; C:nucleolus; IDA:PomBase.::GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.::GO:0005685; C:U1 snRNP; IDA:PomBase.
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017069; F:snRNA binding; IEA:InterPro.
GO:0000395; P:nuclear mRNA 5'-splice site recognition; IC:PomBase.
38B4PIS2    582   SHEP_DROYA Protein alan shepard OS=Drosophila...552.6     35.8     29     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009629; P:response to gravity; ISS:UniProtKB.
39B3NGA1    582   SHEP_DROER Protein alan shepard OS=Drosophila...552.6     35.8     29     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009629; P:response to gravity; ISS:UniProtKB.
40Q8MSV2    578   SHEP_DROME Protein alan shepard OS=Drosophila...552.8     35.4     29     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009629; P:response to gravity; IMP:UniProtKB.
41B4HUE4    579   SHEP_DROSE Protein alan shepard OS=Drosophila...552.8     35.4     29     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009629; P:response to gravity; ISS:UniProtKB.
42Q8CH84    359   ELAV2_RAT ELAV-like protein 2 OS=Rattus norve...1212.8     35.4     26     44
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
43Q9LM20    515   PUM8_ARATH Putative pumilio homolog 8, chloro...2193     35.4     23     39GO:0009507; C:chloroplast; IEA:UniProtKB-SubCell.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006417; P:regulation of translation; IEA:UniProtKB-KW.
44Q5R4C5    189   STMN4_PONAB Stathmin-4 OS=Pongo abelii (Sumat...1183.1     34.7     26     47GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030426; C:growth cone; IEA:UniProtKB-SubCell.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
45Q9H169    189   STMN4_HUMAN Stathmin-4 OS=Homo sapiens (Human...1183.1     34.7     26     47GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030426; C:growth cone; IEA:UniProtKB-SubCell.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
46Q5R9Z6    359   ELAV2_PONAB ELAV-like protein 2 OS=Pongo abel...1213.1     35     26     44
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
47Q12926    359   ELAV2_HUMAN ELAV-like protein 2 OS=Homo sapie...1213.1     35     26     44
GO:0003730; F:mRNA 3'-UTR binding; TAS:ProtInc.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:UniProtKB.
GO:0006355; P:regulation of transcription, DNA-dependent; TAS:ProtInc.
48Q60899    360   ELAV2_MOUSE ELAV-like protein 2 OS=Mus muscul...1213.4     35     26     44
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
49P63043    189   STMN4_RAT Stathmin-4 OS=Rattus norvegicus (Ra...1183.8     34.3     26     47GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030426; C:growth cone; IEA:UniProtKB-SubCell.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
50P63042    189   STMN4_MOUSE Stathmin-4 OS=Mus musculus (Mouse...1183.8     34.3     26     47GO:0030424; C:axon; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030426; C:growth cone; IEA:UniProtKB-SubCell.
GO:0035556; P:intracellular signal transduction; IEA:InterPro.
51Q10238    581   MPF1_SCHPO Meiotic PUF family protein 1 OS=Sc...1194.4     35     21     50GO:0005737; C:cytoplasm; IDA:PomBase.
GO:0003729; F:mRNA binding; ISS:PomBase.
GO:0007126; P:meiosis; IEP:PomBase.
52B4QRJ0    576   SHEP_DROSI Protein alan shepard OS=Drosophila...536.3     34.3     30     49
GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0009629; P:response to gravity; ISS:UniProtKB.
53Q91903    389   ELAV2_XENLA ELAV-like protein 2 OS=Xenopus la...1218.5     33.9     26     44GO:0005938; C:cell cortex; IDA:UniProtKB.::GO:0030529; C:ribonucleoprotein complex; IDA:UniProtKB.
GO:0003730; F:mRNA 3'-UTR binding; IDA:UniProtKB.::GO:0000166; F:nucleotide binding; IEA:InterPro.::GO:0017131; F:uridine-rich cytoplasmic polyadenylylation element binding; IDA:UniProtKB.
GO:0008298; P:intracellular mRNA localization; IMP:UniProtKB.::GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IDA:UniProtKB.::GO:0007399; P:nervous system development; IMP:UniProtKB.::GO:0051260; P:protein homooligomerization; IDA:UniProtKB.
records
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