Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR029C
Length:
832
Number of sequences:
5887
Description:
YPR029C APL4 SGDID:S000006233, Chr XVI from 626967-624469, Genome Release 64-1-1, reverse complement, Verified ORF, "Gamma-adaptin, large subunit of the clathrin-associated protein (AP-1) complex; binds clathrin; involved in vesicle mediated transport"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q9C744    869   AP3D_ARATH AP-3 complex subunit delta OS=Arab...1660.0000000001     69.3     31     52GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005515; F:protein binding; IPI:UniProtKB.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0007032; P:endosome organization; IMP:TAIR.::GO:0006886; P:intracellular protein transport; IMP:TAIR.::GO:0080171; P:lytic vacuole organization; IMP:TAIR.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
32P54362    1034   AP3D_DROME AP-3 complex subunit delta OS=Dros...1580.0000000003     67.8     27     49GO:0030123; C:AP-3 adaptor complex; NAS:UniProtKB.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005783; C:endoplasmic reticulum; IDA:FlyBase.::GO:0005795; C:Golgi stack; IDA:FlyBase.::GO:0005798; C:Golgi-associated vesicle; NAS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0048072; P:compound eye pigmentation; IMP:FlyBase.::GO:0008340; P:determination of adult lifespan; IMP:FlyBase.::GO:0008057; P:eye pigment granule organization; IMP:UniProtKB.::GO:0006895; P:Golgi to endosome transport; NAS:UniProtKB.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0007041; P:lysosomal transport; TAS:FlyBase.::GO:0060967; P:negative regulation of gene silencing by RNA; IMP:FlyBase.::GO:0006727; P:ommochrome biosynthetic process; IMP:FlyBase.
33Q865S1    1207   AP3D1_BOVIN AP-3 complex subunit delta-1 OS=B...1620.0000000004     67.8     27     49GO:0000139; C:Golgi membrane; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
34Q54WN0    1143   AP3D_DICDI AP-3 complex subunit delta OS=Dict...1640.0000000007     66.6     26     52GO:0030123; C:AP-3 adaptor complex; IDA:dictyBase.::GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0010008; C:endosome membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
35Q9UTL8    825   AP3D_SCHPO AP-3 complex subunit delta OS=Schi...1570.00000001     62.4     32     50GO:0030123; C:AP-3 adaptor complex; NAS:PomBase.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IDA:PomBase.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006896; P:Golgi to vacuole transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.
36Q08951    932   AP3D_YEAST AP-3 complex subunit delta OS=Sacc...1700.00000006     60.5     28     51GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006896; P:Golgi to vacuole transport; IMP:SGD.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
37Q6FM46    972   COPB_CANGA Coatomer subunit beta OS=NRRL Y-65...4440.001     46.2     22     39GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
38P62944    937   AP2B1_RAT AP-2 complex subunit beta OS=Rattus...1220.021     42.4     24     46GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.::GO:0005802; C:trans-Golgi network; IDA:RGD.
GO:0030276; F:clathrin binding; IDA:BHF-UCL.::GO:0032403; F:protein complex binding; IMP:RGD.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0048268; P:clathrin coat assembly; IDA:BHF-UCL.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
39P63010    937   AP2B1_HUMAN AP-2 complex subunit beta OS=Homo...1220.021     42.4     24     46GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005829; C:cytosol; TAS:Reactome.::GO:0030666; C:endocytic vesicle membrane; TAS:Reactome.::GO:0005886; C:plasma membrane; TAS:Reactome.
GO:0030276; F:clathrin binding; IPI:UniProtKB.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0007411; P:axon guidance; TAS:Reactome.::GO:0007173; P:epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0042059; P:negative regulation of epidermal growth factor receptor signaling pathway; TAS:Reactome.::GO:0048011; P:nerve growth factor receptor signaling pathway; TAS:Reactome.::GO:0050690; P:regulation of defense response to virus by virus; TAS:Reactome.::GO:0007268; P:synaptic transmission; TAS:Reactome.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.::GO:0016032; P:viral reproduction; TAS:Reactome.
40Q9DBG3    937   AP2B1_MOUSE AP-2 complex subunit beta OS=Mus ...1220.021     42.4     24     46GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
41P63009    937   AP2B1_BOVIN AP-2 complex subunit beta OS=Bos ...1220.021     42.4     24     46GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0005905; C:coated pit; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
42Q08DS7    951   AP1B1_BOVIN AP-1 complex subunit beta-1 OS=Bo...1220.022     42.4     24     46GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
43Q0JNK5    950   COPB2_ORYSJ Coatomer subunit beta-2 OS=Oryza ...1200.038     41.6     33     45GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
44Q9SUS3    894   APBLB_ARATH Beta-adaptin-like protein B OS=Ar...1310.065     40.4     24     47GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IDA:TAIR.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
45O81742    893   APBLC_ARATH Beta-adaptin-like protein C OS=Ar...1310.069     40.4     24     47GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0005886; C:plasma membrane; IEA:UniProtKB-SubCell.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006897; P:endocytosis; IEA:UniProtKB-KW.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
46Q755A1    899   AP3D_ASHGO AP-3 complex subunit delta OS=Y-10...2490.23     38.9     23     40GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.::GO:0030117; C:membrane coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:InterPro.
47Q54X82    942   AP1B_DICDI AP-1 complex subunit beta OS=Dicty...1320.23     38.9     22     44GO:0030131; C:clathrin adaptor complex; IEA:InterPro.::GO:0030665; C:clathrin coated vesicle membrane; IEA:UniProtKB-SubCell.::GO:0005794; C:Golgi apparatus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:dictyBase.::GO:0008565; F:protein transporter activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.
48Q54HL0    898   COPG_DICDI Coatomer subunit gamma OS=Dictyost...1810.47     37.7     21     45GO:0005813; C:centrosome; IDA:dictyBase.::GO:0030126; C:COPI vesicle coat; ISS:dictyBase.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006891; P:intra-Golgi vesicle-mediated transport; ISS:dictyBase.::GO:0006886; P:intracellular protein transport; IEA:InterPro.
49Q53PC7    953   COPB1_ORYSJ Coatomer subunit beta-1 OS=Oryza ...1210.76     37     32     45GO:0030126; C:COPI vesicle coat; IEA:InterPro.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006886; P:intracellular protein transport; IEA:InterPro.::GO:0016192; P:vesicle-mediated transport; IEA:UniProtKB-KW.
50Q9UUF7    940   COPB_SCHPO Coatomer subunit beta OS=Schizosac...842.2     35.4     32     44GO:0030126; C:COPI vesicle coat; ISS:PomBase.::GO:0005829; C:cytosol; IDA:PomBase.::GO:0030134; C:ER to Golgi transport vesicle; IC:PomBase.
GO:0005488; F:binding; IEA:InterPro.::GO:0005198; F:structural molecule activity; IEA:InterPro.
GO:0006888; P:ER to Golgi vesicle-mediated transport; ISS:PomBase.::GO:0006886; P:intracellular protein transport; IC:PomBase.
51Q5RDG2    558   ARMX5_PONAB Armadillo repeat-containing X-lin...1184.9     34.3     25     49
GO:0005488; F:binding; IEA:InterPro.
52A4SJ26    336   RUVB_AERS4 Holliday junction ATP-dependent DN...1685     33.9     27     43
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0003677; F:DNA binding; IEA:InterPro.::GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
GO:0006310; P:DNA recombination; IEA:UniProtKB-KW.::GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0009432; P:SOS response; IEA:UniProtKB-KW.
records
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