Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
Home About FGC Use Cases Species List

UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR025C
Length:
393
Number of sequences:
5887
Description:
YPR025C CCL1 SGDID:S000006229, Chr XVI from 614558-613377, Genome Release 64-1-1, reverse complement, Verified ORF, "Cyclin associated with protein kinase Kin28p, which is the TFIIH-associated carboxy-terminal domain (CTD) kinase involved in transcription initiation at RNA polymerase II promoters"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
31Q6FJE8    339   SSN8_CANGA RNA polymerase II holoenzyme cycli...1550.00000001     59.7     28     46GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
32Q4P101    393   SSN8_USTMA RNA polymerase II holoenzyme cycli...1180.00000001     60.1     31     50GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
33A1C7R6    302   SSN8_ASPCL RNA polymerase II holoenzyme cycli...1810.00000002     58.9     23     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
34Q2RAC5    490   CCT13_ORYSJ Cyclin-T1-3 OS=Oryza sativa subsp...2310.00000003     59.3     26     40GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
35Q9FKE6    579   CCT15_ARATH Cyclin-T1-5 OS=Arabidopsis thalia...2030.00000007     58.2     26     42GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0009908; P:flower development; IMP:TAIR.::GO:0048366; P:leaf development; IGI:TAIR.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0050792; P:regulation of viral reproduction; IMP:TAIR.::GO:0009615; P:response to virus; IEP:TAIR.::GO:0010090; P:trichome morphogenesis; IMP:TAIR.
36A4RD79    363   SSN8_MAGO7 RNA polymerase II holoenzyme cycli...2420.0000002     56.6     22     42GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
37Q2GVK1    364   SSN8_CHAGB RNA polymerase II holoenzyme cycli...1810.0000002     56.2     23     45GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
38Q2QQS5    543   CCT14_ORYSJ Cyclin-T1-4 OS=Oryza sativa subsp...2030.0000002     56.6     25     42GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
39O94503    228   SRB11_SCHPO RNA polymerase II holoenzyme cycl...1120.0000002     55.1     32     50GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.::GO:0016592; C:mediator complex; IDA:PomBase.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006357; P:regulation of transcription from RNA polymerase II promoter; IC:PomBase.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
40Q6CP20    304   SSN8_KLULA RNA polymerase II holoenzyme cycli...1850.0000004     54.7     26     47GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
41Q8GYM6    541   CCT14_ARATH Cyclin-T1-4 OS=Arabidopsis thalia...2030.0000004     55.5     25     42GO:0005634; C:nucleus; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0048366; P:leaf development; IGI:TAIR.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0009615; P:response to virus; IEP:TAIR.::GO:0010090; P:trichome morphogenesis; IMP:TAIR.
42Q9C1M4    319   SSN8_GIBMO RNA polymerase II holoenzyme cycli...2560.0000007     54.3     21     42GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
43Q75AX7    332   SSN8_ASHGO RNA polymerase II holoenzyme cycli...2440.0000007     54.3     25     43GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
44Q9HE63    345   SSN8_NEUCR RNA polymerase II holoenzyme cycli...2490.0000007     54.3     21     41GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
45Q4WZT9    302   SSN8_ASPFU RNA polymerase II holoenzyme cycli...1780.000004     51.6     22     44GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
46Q56YF8    460   CCT12_ARATH Cyclin-T1-2 OS=Arabidopsis thalia...1290.00001     50.8     28     47
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
47Q5BKF8    497   CCNL2_XENTR Cyclin-L2 OS=Xenopus tropicalis (...2230.00002     49.7     24     39GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
48Q0CV29    301   SSN8_ASPTN RNA polymerase II holoenzyme cycli...2310.00002     49.3     23     43GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
49Q2UDB2    301   SSN8_ASPOR RNA polymerase II holoenzyme cycli...2760.00002     49.3     21     42GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
50Q9C8P7    247   CCT11_ARATH Putative cyclin-T1-1 OS=Arabidops...1370.00004     48.1     31     45
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
51Q6Z7H3    630   CCT12_ORYSJ Cyclin-T1-2 OS=Oryza sativa subsp...1350.00006     48.9     28     42
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
52Q6CAC7    280   SSN8_YARLI RNA polymerase II holoenzyme cycli...1030.00008     47.8     27     51GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
53Q8N1B3    248   FA58A_HUMAN Cyclin-related protein FAM58A OS=...1120.0001     46.6     29     48
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
54P0C7Q3    252   FA58B_HUMAN Putative cyclin-related protein F...1190.0008     44.3     27     47
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.
55Q1EAW8    318   SSN8_COCIM RNA polymerase II holoenzyme cycli...1940.001     44.3     20     41GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
56Q5A4H9    434   SSN8_CANAL RNA polymerase II holoenzyme cycli...1000.001     44.3     29     49GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0031505; P:fungal-type cell wall organization; IMP:CGD.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
57Q5BBA8    302   SSN8_EMENI RNA polymerase II holoenzyme cycli...1780.001     43.9     20     44GO:0016591; C:DNA-directed RNA polymerase II, holoenzyme; IEA:InterPro.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
58Q9AS36    427   CCL11_ORYSJ Cyclin-L1-1 OS=Oryza sativa subsp...1460.002     43.5     23     43
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:InterPro.::GO:0006396; P:RNA processing; IEA:InterPro.
59O74627    342   CG1C_SCHPO Cyclin pch1 OS=Schizosaccharomyces...1640.002     43.5     27     38GO:0005829; C:cytosol; IDA:PomBase.::GO:0008024; C:positive transcription elongation factor complex b; TAS:PomBase.
GO:0016538; F:cyclin-dependent protein kinase regulator activity; NAS:PomBase.::GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0006370; P:mRNA capping; TAS:PomBase.::GO:0070816; P:phosphorylation of RNA polymerase II C-terminal domain; IDA:PomBase.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; NAS:PomBase.::GO:0034243; P:regulation of transcription elongation from RNA polymerase II promoter; NAS:PomBase.
60O88874    554   CCNK_MOUSE Cyclin-K OS=Mus musculus (Mouse). ...1600.004     43.1     24     41
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0051301; P:cell division; IEA:UniProtKB-KW.::GO:0007067; P:mitosis; IEA:UniProtKB-KW.::GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
61Q96S94    520   CCNL2_HUMAN Cyclin-L2 OS=Homo sapiens (Human)...2230.004     42.7     22     39GO:0016607; C:nuclear speck; IEA:UniProtKB-SubCell.
GO:0019901; F:protein kinase binding; IEA:InterPro.
GO:0000079; P:regulation of cyclin-dependent protein kinase activity; IEA:InterPro.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006396; P:RNA processing; IEA:InterPro.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
records
Previous ‹‹ ›› Next Total records: 98 31 - 60
Elimate unknown annotation:
Filter for keyword on hit description:
Select upper E value:
Select lower bit score:
Select lower %idenity value:
Select lower %positive value:
Taxonomic division:
Lower limit on hit length:
Lower limit on alignment length::