Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPR016C
Length:
245
Number of sequences:
5887
Description:
YPR016C TIF6 SGDID:S000006220, Chr XVI from 593069-592332, Genome Release 64-1-1, reverse complement, Verified ORF, "Constituent of 66S pre-ribosomal particles, has similarity to human translation initiation factor 6 (eIF6); may be involved in the biogenesis and or stability of 60S ribosomal subunits"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q12522    245   IF6_YEAST Eukaryotic translation initiation f...2455e-178     496     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.::GO:0030687; C:preribosome, large subunit precursor; IDA:SGD.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043023; F:ribosomal large subunit binding; IDA:SGD.::GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0000466; P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0000463; P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); IMP:SGD.::GO:0042256; P:mature ribosome assembly; IEA:InterPro.::GO:0000054; P:ribosomal subunit export from nucleus; IGI:SGD.
2Q59L13    245   IF6_CANAL Eukaryotic translation initiation f...2452e-168     471     92     98GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
3O94476    244   IF6_SCHPO Eukaryotic translation initiation f...2452e-141     403     77     90GO:0005829; C:cytosol; IDA:PomBase.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0002183; P:cytoplasmic translational initiation; NAS:PomBase.::GO:0042256; P:mature ribosome assembly; IEA:InterPro.
4D1ZG64    246   IF6_SORMK Eukaryotic translation initiation f...2451e-140     401     78     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
5Q7S2W6    246   IF6_NEUCR Eukaryotic translation initiation f...2455e-140     400     77     91GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
6C9SV08    246   IF6_VERA1 Eukaryotic translation initiation f...2452e-138     396     76     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
7Q5ASA6    247   IF6_EMENI Eukaryotic translation initiation f...2463e-137     393     76     89GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
8Q2UTN7    247   IF6_ASPOR Eukaryotic translation initiation f...2473e-137     393     75     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
9Q6GR45    245   IF6_XENLA Eukaryotic translation initiation f...2452e-136     390     73     87GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
10B8MDN4    247   IF6_TALSN Eukaryotic translation initiation f...2462e-135     388     74     90GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
11P56538    245   IF6_DROME Eukaryotic translation initiation f...2452e-135     388     74     87GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
12Q9M060    245   IF62_ARATH Eukaryotic translation initiation ...2447e-135     387     75     87GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0071215; P:cellular response to abscisic acid stimulus; IEP:TAIR.::GO:0009793; P:embryo development ending in seed dormancy; IMP:TAIR.::GO:0042256; P:mature ribosome assembly; IEA:InterPro.
13P56537    245   IF6_HUMAN Eukaryotic translation initiation f...2455e-134     384     72     87GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0043022; F:ribosome binding; IDA:UniProtKB.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IMP:UniProtKB.
14O55135    245   IF6_MOUSE Eukaryotic translation initiation f...2456e-134     384     72     87GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005638; C:lamin filament; IDA:MGI.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; ISS:UniProtKB.
15Q3KRD8    245   IF6_RAT Eukaryotic translation initiation fac...2459e-134     384     72     87GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
16Q6ZM19    245   IF6_DANRE Eukaryotic translation initiation f...2453e-133     382     71     85GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
17Q9TU47    245   IF6_BOVIN Eukaryotic translation initiation f...2453e-132     380     71     86GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
18A4RSQ6    245   IF6_OSTLU Eukaryotic translation initiation f...2434e-122     354     66     84GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
19B9PVB9    249   IF6_TOXGO Eukaryotic translation initiation f...2492e-117     342     65     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
20Q551M2    244   IF6_DICDI Eukaryotic translation initiation f...2292e-114     335     69     82GO:0005737; C:cytoplasm; IDA:dictyBase.::GO:0005730; C:nucleolus; IDA:dictyBase.
GO:0043023; F:ribosomal large subunit binding; ISS:dictyBase.::GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.::GO:0042273; P:ribosomal large subunit biogenesis; ISS:dictyBase.
21Q245F2    245   IF6_TETTS Eukaryotic translation initiation f...2412e-113     332     61     83GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
22O62106    246   IF6_CAEEL Eukaryotic translation initiation f...2441e-109     323     64     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0042256; P:mature ribosome assembly; IEA:InterPro.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006898; P:receptor-mediated endocytosis; IMP:WormBase.
23A7ANL7    249   IF6_BABBO Eukaryotic translation initiation f...2474e-106     313     61     79GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
24Q4E097    248   IF61_TRYCC Eukaryotic translation initiation ...2456e-106     313     59     80GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
25O22290    247   IF61_ARATH Eukaryotic translation initiation ...2463e-104     309     61     78GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
26B0EMY3    239   IF6_ENTDS Eukaryotic translation initiation f...2265e-100     298     61     79GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
27Q8SS47    241   IF6_ENCCU Eukaryotic translation initiation f...2281e-76     238     52     70GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
28Q98RM8    228   IF6_GUITH Eukaryotic translation initiation f...2237e-47     161     36     57GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
29Q8U3S8    227   IF6_PYRFU Translation initiation factor 6 OS=...2193e-38     139     37     55
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
30B6YWY2    228   IF6_THEON Translation initiation factor 6 OS=...2265e-37     135     35     53
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
31Q9YD27    233   IF6_AERPE Translation initiation factor 6 OS=...2157e-37     135     38     61
GO:0043022; F:ribosome binding; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
GO:0042256; P:mature ribosome assembly; IEA:InterPro.
records
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