Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL217C
Length:
1183
Number of sequences:
5887
Description:
YPL217C BMS1 SGDID:S000006138, Chr XVI from 143171-139620, Genome Release 64-1-1, reverse complement, Verified ORF, "GTPase required for synthesis of 40S ribosomal subunits and for processing the 35S pre-rRNA at sites A0, A1, and A2; interacts with Rcl1p, which stimulates its GTPase and U3 snoRNA binding activities; has similarity to Tsr1p"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q08965    1183   BMS1_YEAST Ribosome biogenesis protein BMS1 O...11830     2447     100     100GO:0030686; C:90S preribosome; IDA:SGD.::GO:0005739; C:mitochondrion; IDA:SGD.::GO:0005730; C:nucleolus; IDA:SGD.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IMP:SGD.::GO:0003924; F:GTPase activity; IDA:SGD.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0034511; F:U3 snoRNA binding; IDA:SGD.
GO:0042255; P:ribosome assembly; IDA:SGD.::GO:0006364; P:rRNA processing; IDA:SGD.
2O94653    1121   BMS1_SCHPO Ribosome biogenesis protein bms1 O...11700     1045     49     67GO:0005739; C:mitochondrion; ISS:PomBase.::GO:0005730; C:nucleolus; ISS:UniProtKB.::GO:0005819; C:spindle; IDA:PomBase.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; ISS:PomBase.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.::GO:0006364; P:rRNA processing; ISS:PomBase.
3Q14692    1282   BMS1_HUMAN Ribosome biogenesis protein BMS1 h...4263e-120     409     49     66GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0005524; F:ATP binding; IEA:UniProtKB-KW.::GO:0005525; F:GTP binding; IEA:InterPro.::GO:0003924; F:GTPase activity; IEA:InterPro.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.
4A8MV67    101   YO021_HUMAN Putative BMS1-like protein ENSP00...1002e-35     136     54     75
5A8MTN0    101   YI027_HUMAN Putative BMS1-like protein ENSP00...1001e-34     134     54     75
6A8MXU9    101   YO022_HUMAN Putative BMS1-like protein ENSP00...1001e-34     134     53     74
7Q5VTM2    703   AGAP9_HUMAN Arf-GAP with GTPase, ANK repeat a...915e-32     137     68     79
GO:0008060; F:ARF GTPase activator activity; IEA:InterPro.::GO:0005525; F:GTP binding; IEA:InterPro.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0005543; F:phospholipid binding; IEA:InterPro.::GO:0008270; F:zinc ion binding; IEA:InterPro.
GO:0032312; P:regulation of ARF GTPase activity; IEA:InterPro.
8Q5XGY1    815   TSR1_XENLA Pre-rRNA-processing protein TSR1 h...3230.00000000000004     80.9     29     44GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.
9Q54YA7    826   TSR1_DICDI Pre-rRNA-processing protein TSR1 h...1980.0000004     58.2     24     43GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.
GO:0042254; P:ribosome biogenesis; IEA:UniProtKB-KW.
10Q5SWD9    803   TSR1_MOUSE Pre-rRNA-processing protein TSR1 h...2140.000004     55.1     26     41GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.
11Q19329    785   TSR1_CAEEL Pre-rRNA-processing protein TSR1 h...2750.00003     52     24     40GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0042255; P:ribosome assembly; ISS:UniProtKB.
12Q61WR2    788   TSR1_CAEBR Pre-rRNA-processing protein TSR1 h...1960.0001     50.1     22     42GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.
13Q2NL82    804   TSR1_HUMAN Pre-rRNA-processing protein TSR1 h...3250.0002     48.9     23     42GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.
14Q5R434    805   TSR1_PONAB Pre-rRNA-processing protein TSR1 h...3300.0002     49.7     22     39GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.
15Q71ZZ7    782   IF2_LISMF Translation initiation factor IF-2 ...1200.0002     49.3     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
16C1L2N1    782   IF2_LISMC Translation initiation factor IF-2 ...1200.0002     49.3     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
17B8DG02    781   IF2_LISMH Translation initiation factor IF-2 ...1200.0002     49.3     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
18Q92C29    782   IF2_LISIN Translation initiation factor IF-2 ...1200.0002     49.3     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
19A0AIC6    780   IF2_LISW6 Translation initiation factor IF-2 ...1200.0003     48.9     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
20Q8Y7F6    779   IF2_LISMO Translation initiation factor IF-2 ...1200.0003     48.9     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
21Q3AB98    827   IF2_CARHZ Translation initiation factor IF-2 ...1250.0007     47.4     30     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
22C5C9T1    930   IF2_MICLC Translation initiation factor IF-2 ...1200.001     47     30     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
23Q9VP47    814   TSR1_DROME Pre-rRNA-processing protein TSR1 h...2030.002     46.2     26     40GO:0005730; C:nucleolus; ISS:UniProtKB.
GO:0005488; F:binding; IEA:InterPro.
GO:0042255; P:ribosome assembly; ISS:UniProtKB.
24O13956    783   TSR1_SCHPO Ribosome biogenesis protein tsr1 h...2040.004     45.1     23     41GO:0005737; C:cytoplasm; ISS:PomBase.::GO:0005730; C:nucleolus; ISS:PomBase.
GO:0043021; F:ribonucleoprotein complex binding; ISS:PomBase.
GO:0006364; P:rRNA processing; ISS:PomBase.
25B0K1D6    692   IF2_THEPX Translation initiation factor IF-2 ...1240.005     44.7     27     53GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
26Q2RJM5    903   IF2_MOOTA Translation initiation factor IF-2 ...1160.007     44.3     31     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
27B7GG75    723   IF2_ANOFW Translation initiation factor IF-2 ...1270.007     44.3     32     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
28Q8CST4    720   IF2_STAES Translation initiation factor IF-2 ...1320.013     43.5     28     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
29Q5HPS2    720   IF2_STAEQ Translation initiation factor IF-2 ...1320.013     43.5     28     50GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
30Q8RA37    707   IF2_THETN Translation initiation factor IF-2 ...1180.017     43.1     27     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
31B2J955    1056   IF2_NOSP7 Translation initiation factor IF-2 ...1140.021     42.7     30     52GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
GO:0005525; F:GTP binding; IEA:UniProtKB-KW.::GO:0003924; F:GTPase activity; IEA:InterPro.::GO:0003743; F:translation initiation factor activity; IEA:UniProtKB-KW.
records
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