Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL213W
Length:
238
Number of sequences:
5887
Description:
YPL213W LEA1 SGDID:S000006134, Chr XVI from 150614-151330, Genome Release 64-1-1, Verified ORF, "Component of U2 snRNP; disruption causes reduced U2 snRNP levels; physically interacts with Msl1p; putative homolog of human U2A' snRNP protein"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1Q08963    238   RU2A_YEAST U2 small nuclear ribonucleoprotein...2381e-173     484     100     100GO:0005737; C:cytoplasm; IDA:SGD.::GO:0005686; C:U2 snRNP; IDA:SGD.::GO:0071004; C:U2-type prespliceosome; IDA:SGD.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IMP:SGD.
2Q6FV04    266   RU2A_CANGA U2 small nuclear ribonucleoprotein...2666e-73     229     48     64GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
3Q755D2    237   RU2A_ASHGO U2 small nuclear ribonucleoprotein...2383e-64     206     47     65GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
4Q5A449    233   RU2A_CANAL U2 small nuclear ribonucleoprotein...2485e-25     103     32     56GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
5Q6BT60    238   RU2A_DEBHA U2 small nuclear ribonucleoprotein...2004e-18     84.3     32     54GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
6Q9USX8    239   RU2A_SCHPO U2 small nuclear ribonucleoprotein...1963e-16     79     30     48GO:0005829; C:cytosol; IDA:PomBase.::GO:0043234; C:protein complex; NAS:PomBase.::GO:0005681; C:spliceosomal complex; NAS:PomBase.::GO:0005686; C:U2 snRNP; ISS:PomBase.
GO:0045292; P:nuclear mRNA cis splicing, via spliceosome; ISS:PomBase.
7Q7S9P4    252   RU2A_NEUCR U2 small nuclear ribonucleoprotein...2000.000000000000003     75.9     32     49GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
8Q4WV66    253   RU2A_ASPFU U2 small nuclear ribonucleoprotein...2200.00000000000009     71.6     29     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
9P43333    249   RU2A_ARATH U2 small nuclear ribonucleoprotein...1860.00000000006     63.5     27     51GO:0015030; C:Cajal body; IDA:TAIR.::GO:0009507; C:chloroplast; IDA:TAIR.::GO:0005829; C:cytosol; IDA:TAIR.::GO:0005730; C:nucleolus; IDA:TAIR.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IDA:TAIR.::GO:0009409; P:response to cold; IEP:TAIR.
10Q9BLB6    253   RU2A_CAEEL Probable U2 small nuclear ribonucl...1900.0000000001     63.2     27     51GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0030529; C:ribonucleoprotein complex; IEA:UniProtKB-KW.
GO:0005515; F:protein binding; IPI:IntAct.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
11Q5BGW9    230   RU2A_EMENI U2 small nuclear ribonucleoprotein...1960.0000000009     60.1     30     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
12Q4P5F9    246   RU2A_USTMA U2 small nuclear ribonucleoprotein...1990.000000002     59.3     29     45GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
13Q5EAD8    192   LRC51_BOVIN Leucine-rich repeat-containing pr...930.00000003     55.5     37     56
14Q6C417    230   RU2A_YARLI U2 small nuclear ribonucleoprotein...2410.0000003     53.1     27     47GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
15Q9V4Q8    265   RU2A_DROME Probable U2 small nuclear ribonucl...2540.0000005     53.1     25     45GO:0071013; C:catalytic step 2 spliceosome; IDA:FlyBase.::GO:0071011; C:precatalytic spliceosome; IDA:FlyBase.::GO:0005686; C:U2 snRNP; ISS:FlyBase.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0007067; P:mitosis; IMP:FlyBase.::GO:0007052; P:mitotic spindle organization; IMP:FlyBase.::GO:0000398; P:nuclear mRNA splicing, via spliceosome; ISS:FlyBase.
16B6CZ54    192   LRC51_PROCO Leucine-rich repeat-containing pr...930.0000006     52     35     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
17B6CZ45    192   LRC51_MACMU Leucine-rich repeat-containing pr...930.0000006     52     35     55GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
18P57784    255   RU2A_MOUSE U2 small nuclear ribonucleoprotein...1920.0000008     52     28     46
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
19Q4R8Y8    255   RU2A_MACFA U2 small nuclear ribonucleoprotein...1920.0000008     52     28     46GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0006397; P:mRNA processing; IEA:UniProtKB-KW.::GO:0008380; P:RNA splicing; IEA:UniProtKB-KW.
20P09661    255   RU2A_HUMAN U2 small nuclear ribonucleoprotein...1920.0000008     52     28     46GO:0071013; C:catalytic step 2 spliceosome; IDA:UniProtKB.::GO:0005654; C:nucleoplasm; TAS:Reactome.::GO:0005686; C:U2 snRNP; TAS:ProtInc.
GO:0005515; F:protein binding; IPI:HGNC.::GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
GO:0000398; P:nuclear mRNA splicing, via spliceosome; IC:UniProtKB.
21Q5ZMN0    262   AN32B_CHICK Acidic leucine-rich nuclear phosp...1280.000001     51.6     35     52GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
22B6CZ61    192   LRC51_RAT Leucine-rich repeat-containing prot...930.000002     50.4     35     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
23Q9DAK8    192   LRC51_MOUSE Leucine-rich repeat-containing pr...1180.000008     48.5     30     51GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
24B3DH20    440   TILB_DANRE Protein TILB homolog OS=Danio reri...1130.00001     48.9     31     51GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
25Q96E66    192   LRC51_HUMAN Leucine-rich repeat-containing pr...930.00002     47.4     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
26B6CZ40    192   LRC51_PANTR Leucine-rich repeat-containing pr...930.00003     47     34     54GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
27Q9D5E4    523   LRC48_MOUSE Leucine-rich repeat-containing pr...1390.00005     47.4     31     50
28Q28FY0    470   TILB_XENTR Protein TILB homolog OS=Xenopus tr...1180.00007     47     28     51GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
29Q9NJE9    383   TILB_TRYBB Protein TILB homolog OS=Trypanosom...1280.0002     45.8     33     45GO:0005929; C:cilium; IEA:UniProtKB-KW.::GO:0019861; C:flagellum; IDA:UniProtKB.::GO:0005932; C:microtubule basal body; IDA:UniProtKB.
GO:0007049; P:cell cycle; IEA:UniProtKB-KW.::GO:0043064; P:flagellum organization; IMP:UniProtKB.::GO:0032054; P:microtubule basal body duplication; IMP:UniProtKB.::GO:0007275; P:multicellular organismal development; IEA:UniProtKB-KW.::GO:0051726; P:regulation of cell cycle; IMP:UniProtKB.
30Q5XI54    523   LRC48_RAT Leucine-rich repeat-containing prot...1370.0004     44.7     33     50
31Q91YK0    686   LRC49_MOUSE Leucine-rich repeat-containing pr...1170.0006     44.3     33     51GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.::GO:0005874; C:microtubule; IEA:UniProtKB-KW.
records
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