Fungal Genome Collection
University of Nebraska Lincoln
School of Biological Sciences and Center for Plant Science Innovation
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UniProt_SwissProt BLAST: Single locus
Species:
Saccharomyces cerevisiae S288C
Locus:
YPL210C
Length:
640
Number of sequences:
5887
Description:
YPL210C SRP72 SGDID:S000006131, Chr XVI from 156212-154290, Genome Release 64-1-1, reverse complement, Verified ORF, "Core component of the signal recognition particle (SRP) ribonucleoprotein (RNP) complex that functions in targeting nascent secretory proteins to the endoplasmic reticulum (ER) membrane"
rec.SubjectHit LengthDescriptionAlign.LenE valueBit score% ident.  % pos.GO associations
1P38688    640   SRP72_YEAST Signal recognition particle subun...6400     1305     100     100GO:0005789; C:endoplasmic reticulum membrane; IEA:UniProtKB-SubCell.::GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.::GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IDA:SGD.
GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005515; F:protein binding; IPI:IntAct.::GO:0005048; F:signal sequence binding; IPI:SGD.
GO:0006617; P:SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition; IC:SGD.
2P91240    635   SRP72_CAEEL Signal recognition particle 72 kD...980.0004     47.4     32     56GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
GO:0008312; F:7S RNA binding; IEA:InterPro.
GO:0010171; P:body morphogenesis; IMP:WormBase.::GO:0009792; P:embryo development ending in birth or egg hatching; IMP:WormBase.::GO:0040007; P:growth; IMP:WormBase.::GO:0040011; P:locomotion; IMP:WormBase.::GO:0002119; P:nematode larval development; IMP:WormBase.::GO:0040010; P:positive regulation of growth rate; IMP:WormBase.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
3O59787    561   SRP72_SCHPO Signal recognition particle subun...1000.008     43.1     31     49GO:0005829; C:cytosol; IDA:PomBase.::GO:0005634; C:nucleus; IDA:PomBase.::GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; ISS:PomBase.
GO:0008312; F:7S RNA binding; IEA:InterPro.
GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; ISS:PomBase.
4O76094    671   SRP72_HUMAN Signal recognition particle 72 kD...690.01     42.7     45     54GO:0005829; C:cytosol; TAS:Reactome.::GO:0005730; C:nucleolus; IDA:HPA.::GO:0005886; C:plasma membrane; IDA:HPA.::GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IDA:UniProtKB.
GO:0008312; F:7S RNA binding; IEA:InterPro.::GO:0005047; F:signal recognition particle binding; IPI:UniProtKB.
GO:0042493; P:response to drug; IDA:UniProtKB.::GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; TAS:Reactome.::GO:0006412; P:translation; TAS:Reactome.
5P33731    671   SRP72_CANFA Signal recognition particle 72 kD...690.011     42.4     45     54GO:0005829; C:cytosol; TAS:Reactome.::GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
GO:0008312; F:7S RNA binding; IEA:InterPro.
GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
6P62598    596   ARR12_ARATH Two-component response regulator ...1261.4     35.8     26     44GO:0005634; C:nucleus; IDA:TAIR.
GO:0003677; F:DNA binding; IEA:UniProtKB-KW.::GO:0000156; F:two-component response regulator activity; IEA:InterPro.
GO:0009736; P:cytokinin mediated signaling pathway; TAS:TAIR.::GO:0006355; P:regulation of transcription, DNA-dependent; IEA:UniProtKB-KW.::GO:0006351; P:transcription, DNA-dependent; IEA:UniProtKB-KW.
7P49965    707   SRP72_SCHMA Signal recognition particle 72 kD...2821.7     35.4     21     42GO:0005786; C:signal recognition particle, endoplasmic reticulum targeting; IEA:UniProtKB-KW.
GO:0008312; F:7S RNA binding; IEA:InterPro.
GO:0006614; P:SRP-dependent cotranslational protein targeting to membrane; IEA:InterPro.
8Q8BJW6    581   EIF2A_MOUSE Eukaryotic translation initiation...414.2     34.3     41     63GO:0005850; C:eukaryotic translation initiation factor 2 complex; ISS:UniProtKB.
GO:0043022; F:ribosome binding; ISS:UniProtKB.::GO:0003743; F:translation initiation factor activity; ISS:UniProtKB.::GO:0000049; F:tRNA binding; ISS:UniProtKB.
GO:0009967; P:positive regulation of signal transduction; IDA:MGI.::GO:0006468; P:protein phosphorylation; IDA:MGI.::GO:0006417; P:regulation of translation; ISS:UniProtKB.::GO:0042255; P:ribosome assembly; ISS:UniProtKB.::GO:0032933; P:SREBP-mediated signaling pathway; IDA:MGI.
9Q178M1    380   FEN1_AEDAE Flap endonuclease 1 OS=Aedes aegyp...748.8     33.1     34     47GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.::GO:0005730; C:nucleolus; IEA:UniProtKB-SubCell.::GO:0005654; C:nucleoplasm; IEA:UniProtKB-SubCell.
GO:0003677; F:DNA binding; IEA:InterPro.::GO:0004519; F:endonuclease activity; IEA:UniProtKB-KW.::GO:0004527; F:exonuclease activity; IEA:UniProtKB-KW.::GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
GO:0006281; P:DNA repair; IEA:UniProtKB-KW.::GO:0006260; P:DNA replication; IEA:UniProtKB-KW.
records
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